OUTPUT OF SPECTRAL REPEAT FINDER
View Fourier Spectrum of Entire DNA Sequence  FFT




Pattern Searched Region Consensus Copy No Score
View Window Spectrum for 2 mer
AT 218501::226952 AT 1608 1.000
AT 226963::228485 AT 279 1.000
View Window Spectrum for 3 mer
AAA 218501::219340 AAA 60 1.000
AAT 218501::219340 AAT 60 1.000
ATA 220188::226598 ATA 494 1.000
ATA 227568::228359 ATA 60 1.000
View Window Spectrum for 4 mer
AATA 218646::219268 AATA 83 0.786
TTTA 219354::219997 TTTA 94 0.806
ATAA 221222::222073 ATAA 104 0.808
TTAT 223069::223720 TTAT 107 0.797
AATA 225881::227835 AATA 256 0.807
View Window Spectrum for 5 mer
AAATA 218501::219803 AAATA 108 0.833
TATAA 220222::220847 TATAA 57 0.839
TTTAT 221456::222732 TTTAT 93 0.828
ATAAA 224436::225761 ATAAA 117 0.844
ATAAA 227058::227681 ATAAA 58 0.841
TATAA 227705::228319 TATAA 45 0.804
View Window Spectrum for 6 mer
AAATAT 218501::220041 AAATAT 75 0.847
AATATA 220243::220978 AATATA 43 0.868
AAATAT 222372::223106 AAATAT 42 0.853
ATAAAA 224389::225914 ATAAAA 86 0.857
ATATTT 225934::227119 ATATTT 66 0.859
View Window Spectrum for 7 mer
AAAATAA 218501::219344 AAAATAA 24 0.881
TAAATAT 220929::221548 TAAATAT 22 0.870
TATATTT 221856::222472 TATATTT 19 0.865
ATATTTA 223317::224014 ATATTTA 28 0.867
ATAAATA 224694::227042 ATAAATA 67 0.864
ATAAATA 227528::228494 ATAAATA 30 0.895
View Window Spectrum for 8 mer
AAAATTAA 218501::219205 AAAATTAA 34 0.801
AATATATT 219348::220238 AATATATT 53 0.790
AATTATAT 220510::221480 AATTATAT 56 0.788
ATATATTA 221578::222250 ATATATTA 35 0.793
TTTATATT 222533::223533 TTTATATT 64 0.781
AAAAATAT 223710::225114 AAAAATAT 66 0.790
AATATAAA 225188::225897 AATATAAA 43 0.779
TTATAAAT 225992::226645 TTATAAAT 41 0.784
AAATAAAT 227007::227978 AAATAAAT 50 0.792
View Window Spectrum for 9 mer
AAAATTATA 218501::219186 AAAATTATA 22 0.813
TAATTATAT 220221::222459 TAATTATAT 81 0.802
TTTATATTT 222608::223244 TTTATATTT 27 0.811
AAATATAAA 223960::227218 AAATATAAA 116 0.802
TTTTTATAT 227624::228500 TTTTTATAT 29 0.808
View Window Spectrum for 10 mer
AATATATATA 218501::220175 AATATATATA 38 0.845
TATTTATATT 220958::221794 TATTTATATT 21 0.829
ATATAAATAT 221813::223039 ATATAAATAT 31 0.845
AAAAAATAAA 224949::225581 AAAAAATAAA 20 0.840