OUTPUT OF SPECTRAL REPEAT FINDER
View Fourier Spectrum of Entire DNA Sequence  FFT




Pattern Searched Region Consensus Copy No Score
View Window Spectrum for 2 mer
AT 9501::15684 AT 1064 1.000
AT 16119::17646 AT 243 1.000
AT 17750::19390 AT 316 1.000
View Window Spectrum for 3 mer
TAT 9501::11188 TAT 113 1.000
ATA 9501::11188 ATA 113 1.000
ATA 11249::14233 ATA 185 1.000
ATA 14511::16694 ATA 138 1.000
TAT 16740::19500 TAT 207 1.000
View Window Spectrum for 4 mer
TTAT 9501::10846 TTAT 172 0.792
TTAT 11284::11913 TTAT 97 0.796
AATA 12082::13413 AATA 139 0.790
TATT 14538::16929 TATT 258 0.797
TTAT 17563::19491 TTAT 241 0.807
View Window Spectrum for 5 mer
TATAA 9501::9985 TATAA 38 0.821
ATATT 11442::14032 ATATT 162 0.849
TATAA 14560::15391 TATAA 81 0.827
TTATT 15481::16156 TTATT 29 0.807
TTTAT 16306::17023 TTTAT 49 0.837
TTTAT 18484::19117 TTTAT 48 0.808
View Window Spectrum for 6 mer
TATTTT 9751::11642 TATTTT 79 0.854
ATAAAA 11945::12776 ATAAAA 27 0.858
TTATTT 13443::14167 TTATTT 37 0.847
ATATTT 15067::16916 ATATTT 63 0.860
ATAAAT 17955::18568 ATAAAT 39 0.850
View Window Spectrum for 7 mer
TTATATA 9501::9832 TTATATA 11 0.896
TTATATT 11489::12718 TTATATT 27 0.873
AAAATTA 12767::13424 AAAATTA 10 0.871
TTTTATT 13584::14457 TTTTATT 29 0.882
AAAAATA 15170::16419 AAAAATA 21 0.884
TATTTTT 17157::17846 TATTTTT 26 0.874
ATTATAT 18028::18893 ATTATAT 26 0.879
View Window Spectrum for 8 mer
AATTATAT 10656::11525 AATTATAT 43 0.782
ATATTAAA 11678::12665 ATATTAAA 34 0.768
AAATATAT 12826::13713 AAATATAT 27 0.782
AATTATAT 14694::15425 AATTATAT 41 0.790
ATATATTT 16567::17314 ATATATTT 44 0.804
TATTATAT 17358::17977 TATTATAT 34 0.776
ATATCATT 18560::19450 ATATCATT 26 0.769
View Window Spectrum for 9 mer
ATAAAAATA 10128::11326 ATAAAAATA 32 0.809
ATATATTAT 11709::12335 ATATATTAT 18 0.821
AAATCAAAA 12400::13190 AAATCAAAA 12 0.806
AAAAATATA 14005::14631 AAAAATATA 31 0.817
AAAATAATA 14727::15899 AAAATAATA 36 0.812
TATATATTT 16092::16797 TATATATTT 15 0.822
ATATATTAT 17828::19500 ATATATTAT 46 0.814
View Window Spectrum for 10 mer
TATATATAAT 9573::10346 TATATATAAT 13 0.823
TAATATATAT 11579::13769 TAATATATAT 28 0.832
TTTTTTTTTC 15563::16377 TTTTTTTTTC 6 0.867
ATATATTTTT 16580::18035 ATATATTTTT 36 0.819
ATTATCTGTA 18881::19500 ATTATCTGTA 7 0.829