OUTPUT OF SPECTRAL REPEAT FINDER
View Fourier Spectrum of Entire DNA Sequence  FFT




Pattern Searched Region Consensus Copy No Score
View Window Spectrum for 2 mer
AT 38001::40634 AT 536 1.000
AT 41450::42895 AT 239 1.000
AT 42961::47791 AT 937 1.000
View Window Spectrum for 3 mer
ATA 38001::39356 ATA 139 1.000
ATA 39775::46661 ATA 502 1.000
ATA 46669::48000 ATA 78 1.000
TAA 46669::48000 TAA 78 1.000
AAT 46669::48000 AAT 78 1.000
View Window Spectrum for 4 mer
AATA 38001::38341 AATA 55 0.795
AATA 38673::39521 AATA 120 0.819
TTAT 39911::44824 TTAT 570 0.793
ATAA 45110::46437 ATAA 198 0.819
TTAT 47243::48000 TTAT 88 0.787
View Window Spectrum for 5 mer
ATAAA 38049::40550 ATAAA 226 0.838
AATAT 40824::42884 AATAT 131 0.821
TTATT 42902::43699 TTATT 51 0.824
TATAA 44788::46012 TATAA 128 0.845
AAATA 46589::47288 AAATA 57 0.842
View Window Spectrum for 6 mer
AATATA 38001::38434 AATATA 27 0.852
TTAATA 40125::41570 TTAATA 49 0.847
ATTTAT 42635::44410 ATTTAT 77 0.844
ATATAA 44765::45829 ATATAA 74 0.872
ATATAA 46172::47080 ATATAA 52 0.853
View Window Spectrum for 7 mer
AATATAT 38080::38956 AATATAT 41 0.892
AAATATA 39338::39990 AAATATA 25 0.891
TAATAAA 40539::41729 TAATAAA 23 0.882
TAATATT 42192::43401 TAATATT 30 0.862
TTTATAT 44157::44790 TTTATAT 32 0.879
AAATATA 44831::45450 AAATATA 30 0.871
ATAAATA 45500::46447 ATAAATA 37 0.865
AAAAATA 46492::47475 AAAAATA 28 0.872
View Window Spectrum for 8 mer
AAAAATAT 38099::38770 AAAAATAT 47 0.806
ATATAAAT 39729::40471 ATATAAAT 37 0.801
TTTTAATT 41104::41968 TTTTAATT 35 0.764
ATTTTTAT 42340::43206 ATTTTTAT 43 0.785
ATATAATT 43300::44771 ATATAATT 75 0.782
AATATAAA 45662::47033 AATATAAA 81 0.785
AATAATTT 47108::47945 AATAATTT 32 0.801
View Window Spectrum for 9 mer
ATATAAAAA 38024::40180 ATATAAAAA 94 0.809
TTAATAATT 40698::42325 TTAATAATT 37 0.790
TTTATATTT 44400::45202 TTTATATTT 36 0.812
TAAATAAAT 45814::46654 TAAATAAAT 35 0.790
TAATATTTT 47021::47989 TAATATTTT 25 0.804
View Window Spectrum for 10 mer
ATATATAAAA 38001::38514 ATATATAAAA 15 0.813
TTTAATATAT 40274::41203 TTTAATATAT 13 0.831
ATTATTCATA 41319::41939 ATTATTCATA 12 0.842
ATATTTTTAA 41953::43983 ATATTTTTAA 29 0.814
TATAAAAATA 44863::45555 TATAAAAATA 23 0.826