OUTPUT OF SPECTRAL REPEAT FINDER
View Fourier Spectrum of Entire DNA Sequence  FFT




Pattern Searched Region Consensus Copy No Score
View Window Spectrum for 2 mer
AT 28501::29587 AT 172 1.000
AT 29699::30822 AT 171 1.000
AT 31332::38500 AT 1291 1.000
View Window Spectrum for 3 mer
AAT 28501::33555 AAT 357 1.000
TAT 33855::37374 TAT 262 1.000
View Window Spectrum for 4 mer
TATT 28501::29060 TATT 89 0.789
ATAA 29132::30528 ATAA 163 0.804
AATA 31343::32308 AATA 125 0.794
AATA 32507::33801 AATA 166 0.809
TATT 33854::34463 TATT 74 0.780
TTAT 35019::38341 TTAT 399 0.821
View Window Spectrum for 5 mer
TATTT 28501::28966 TATTT 49 0.837
AATAT 29451::31279 AATAT 122 0.839
AAAAT 31620::32763 AAAAT 88 0.839
TTTAT 33512::35047 TTTAT 122 0.834
TTATT 35882::36503 TTATT 46 0.874
TTATT 36591::37204 TTATT 50 0.844
AATAT 37257::37973 AATAT 57 0.835
View Window Spectrum for 6 mer
TTATTT 28501::29017 TTATTT 38 0.851
AATAAT 30591::31327 AATAAT 33 0.854
AAATAT 31381::32478 AAATAT 46 0.855
ATAAAT 32921::33685 ATAAAT 35 0.852
ATTTAT 33848::34501 ATTTAT 33 0.848
ATAAAT 35034::35657 ATAAAT 37 0.847
TTATAT 36804::38434 TTATAT 77 0.870
View Window Spectrum for 7 mer
TTTATTT 28501::29145 TTTATTT 30 0.867
AAAAATA 29331::30020 AAAAATA 19 0.880
AATTATA 30884::31592 AATTATA 22 0.870
AAAATAT 31618::33157 AAAATAT 45 0.867
ATATATT 33489::35742 ATATATT 73 0.877
TATATAT 37342::38046 TATATAT 20 0.893
View Window Spectrum for 8 mer
ATTTATAA 28501::30339 ATTTATAA 79 0.771
AAATTATA 31389::32603 AAATTATA 59 0.794
TAAATATT 33827::35365 TAAATATT 73 0.779
TATTTATT 35591::37977 TATTTATT 107 0.780
View Window Spectrum for 9 mer
TATTTTTTT 28501::29045 TATTTTTTT 23 0.850
TAATAAAAA 29604::30301 TAATAAAAA 19 0.819
AAAATTAAT 30784::31844 AAAATTAAT 35 0.803
ATATTTATA 32514::34941 ATATTTATA 71 0.811
TATTTTTAT 35489::36945 TATTTTTAT 45 0.817
View Window Spectrum for 10 mer
AAATAAAAAT 29475::32925 AAATAAAAAT 59 0.822
AATATTTATA 33010::34168 AATATTTATA 26 0.827
AAATATATAA 34444::35338 AAATATATAA 21 0.838
TAATTATTTT 35918::37241 TAATTATTTT 30 0.820
TATAAATATT 37513::38500 TATAAATATT 22 0.832