OUTPUT OF SPECTRAL REPEAT FINDER
View Fourier Spectrum of Entire DNA Sequence  FFT




Pattern Searched Region Consensus Copy No Score
View Window Spectrum for 2 mer
AT 19001::20169 AT 254 1.000
AT 20911::28845 AT 1269 1.000
View Window Spectrum for 3 mer
TAT 19001::19308 TAT 28 1.000
TAT 19524::20182 TAT 63 1.000
AAA 20631::21914 AAA 134 1.000
AAT 22263::24862 AAT 154 1.000
TAT 25332::28679 TAT 180 1.000
View Window Spectrum for 4 mer
TATT 19001::19341 TATT 49 0.816
AATA 20181::22520 AATA 333 0.822
AATA 22702::25403 AATA 324 0.803
AATA 26017::26746 AATA 76 0.776
TATT 26771::27737 TATT 96 0.786
TTAT 28284::28997 TTAT 97 0.784
View Window Spectrum for 5 mer
ATAAA 19001::21782 ATAAA 244 0.837
AAATA 21982::23600 AAATA 120 0.837
ATTTA 23826::25038 ATTTA 82 0.844
TTTAT 26824::28966 TTTAT 123 0.831
View Window Spectrum for 6 mer
TATATT 19001::19361 TATATT 19 0.851
AATATA 19671::20283 AATATA 39 0.846
AAATAA 22724::23803 AAATAA 50 0.850
TTATAT 24371::24983 TTATAT 26 0.846
AAATAT 25235::26052 AAATAT 38 0.864
ATATTT 27041::27823 ATATTT 18 0.852
TTATTT 28250::29000 TTATTT 40 0.854
View Window Spectrum for 7 mer
AATATAT 19115::20467 AATATAT 53 0.881
AATAAAA 21308::22144 AATAAAA 41 0.889
ATATATT 22430::23079 ATATATT 18 0.881
ATAAAAA 23197::24926 ATAAAAA 40 0.861
AAATATA 25200::25904 AAATATA 20 0.879
TAAATAT 26552::27873 TAAATAT 23 0.876
View Window Spectrum for 8 mer
ATATAAAT 19001::21184 ATATAAAT 113 0.791
ATATTTAA 21865::23878 ATATTTAA 84 0.783
AATATTTA 23904::24584 AATATTTA 28 0.795
ATAAATTT 25664::26530 ATAAATTT 37 0.774
AAAAATAT 26716::27789 AAAAATAT 35 0.779
ATTATTTT 27951::28965 ATTATTTT 41 0.793
View Window Spectrum for 9 mer
TATATAATA 19001::19915 TATATAATA 33 0.811
AAATATAAA 20292::22226 AAATATAAA 81 0.812
AAAAATATA 22723::24682 AAAAATATA 50 0.802
AATATATTT 24773::26656 AATATATTT 52 0.797
AAATATATA 26848::27533 AAATATATA 16 0.833
TATTTTTTT 28350::28998 TATTTTTTT 24 0.847
View Window Spectrum for 10 mer
ATATATATTT 19001::19324 ATATATATTT 10 0.830
AAAAATTAAT 22942::24056 AAAAATTAAT 20 0.825
ATATTTATTT 24622::25751 ATATTTATTT 25 0.824
ATAAATATTT 25975::28481 ATAAATATTT 32 0.816