OUTPUT OF SPECTRAL REPEAT FINDER
View Fourier Spectrum of Entire DNA Sequence  FFT




Pattern Searched Region Consensus Copy No Score
View Window Spectrum for 2 mer
AT 9501::16854 AT 1107 1.000
AT 17356::19439 AT 382 1.000
View Window Spectrum for 3 mer
TAT 9501::13052 TAT 192 1.000
TAT 13130::19308 TAT 375 1.000
View Window Spectrum for 4 mer
AATA 10073::10843 AATA 80 0.778
TATT 10856::12005 TATT 114 0.785
TATT 12896::14673 TATT 210 0.800
TATT 15413::16132 TATT 87 0.793
TATT 16700::19341 TATT 320 0.807
View Window Spectrum for 5 mer
TTTAT 10909::12864 TTTAT 113 0.834
TTTAT 13687::14388 TTTAT 45 0.836
TATTT 15861::18279 TATTT 147 0.833
TAATA 18733::19390 TAATA 53 0.823
View Window Spectrum for 6 mer
ATAAAT 9501::10885 ATAAAT 52 0.846
TATATT 13531::15186 TATATT 60 0.856
ATTTTT 15818::16879 ATTTTT 35 0.857
ATATTT 17234::17914 ATATTT 23 0.862
TATATT 18493::19361 TATATT 45 0.863
View Window Spectrum for 7 mer
AAATATA 9501::10014 AAATATA 15 0.886
TAAATAT 10637::12024 TAAATAT 27 0.873
AATATAT 12155::14792 AATATAT 56 0.872
TATTTTT 15170::16010 TATTTTT 20 0.871
TTTTTCT 16281::17278 TTTTTCT 19 0.872
TATTTAT 17918::19253 TATTTAT 49 0.880
View Window Spectrum for 8 mer
ATAAATTT 9544::10615 ATAAATTT 46 0.772
AAAAATAT 10801::11817 AAAAATAT 37 0.784
ATATAATT 12909::13540 ATATAATT 38 0.789
ATATTTTT 14896::15899 ATATTTTT 31 0.794
TTTTATAT 16609::18642 TTTTATAT 79 0.799
TTAATATA 18811::19458 TTAATATA 34 0.757
View Window Spectrum for 9 mer
AATATATAT 9557::10742 AATATATAT 31 0.824
AAATATATA 10933::11618 AAATATATA 16 0.833
TTAATATAT 12393::14206 TTAATATAT 56 0.804
TAAATATTT 14573::15571 TAAATATTT 16 0.813
ATATTTTTT 15663::16416 ATATTTTTT 21 0.820
ATTTTCTTT 16584::17396 ATTTTCTTT 17 0.810
TTTTTATAT 17725::18488 TTTTTATAT 34 0.820
TATATAATA 18634::19327 TATATAATA 27 0.815
View Window Spectrum for 10 mer
AATATATATA 10062::11419 AATATATATA 21 0.843
ATTTTTATAT 11791::13967 ATTTTTATAT 37 0.811
ATATATGTAT 14451::15343 ATATATg/aTAT 12 0.833
TTTTTTCTTT 16238::16900 TTTTTTCTTT 10 0.860
TTATATTTTC 16920::17647 TTATATTTTC 7 0.829
ATATATTTAT 17939::19324 ATATATTTAT 42 0.833