Virtual Matrix for HLA-DRB1_0804

HELPHOMEMHC & Prediction Algorithms

Amino acid/Position
P1
P2
P3
P4
P5
P6
P7
P8
P9
A:
-999.00
0.00
0.00
0.00
-
0.00
0.00
-
0.00
D:
-999.00
-1.30
-1.30
-1.00
-
-2.40
-2.40
-
-1.70
E:
-999.00
0.10
-1.20
-1.00
-
-1.40
-2.40
-
-1.70
F:
-1.00
0.80
0.80
0.50
-
-1.40
-0.90
-
-1.00
G:
-999.00
0.50
0.20
-1.00
-
-0.70
-0.50
-
-1.00
H:
-999.00
0.80
0.20
-1.00
-
-0.10
-0.90
-
0.08
I:
0.00
1.10
1.50
0.30
-
0.70
-0.80
-
-0.30
K:
-999.00
1.10
0.00
2.30
-
1.30
-0.80
-
-0.30
L:
0.00
1.00
1.00
0.70
-
0.20
-0.30
-
-1.00
M:
0.00
1.10
1.40
1.40
-
-0.90
-0.30
-
-0.40
N:
-999.00
0.80
0.50
0.00
-
-0.60
-1.30
-
-1.40
P:
-999.00
-0.50
0.30
-1.00
-
0.50
-1.20
-
-1.30
Q:
-999.00
1.20
0.00
-1.00
-
-0.30
-1.20
-
0.50
R:
-999.00
2.20
0.70
2.30
-
1.00
-0.60
-
-1.00
S:
-999.00
-0.30
0.20
-1.00
-
-0.10
-1.30
-
0.70
T:
-999.00
0.00
0.00
-1.00
-
0.80
-2.40
-
-1.20
V:
0.00
2.10
0.50
0.30
-
1.20
-1.10
-
-0.70
W:
-1.00
-0.10
0.00
0.00
-
-1.40
-1.20
-
-1.00
Y:
-1.00
0.90
0.80
2.20
-
-1.40
-1.10
-
-1.00

Percent Threshold
1%
2%
3%
4%
5%
6%
7%
8%
9%
10%
Numerical Score
2.7
2.1
1.6
1.2
0.88
0.5
0.3
0.1
-0.1
-0.3

The threshold is defined as the 'percentage of best scoring natural peptides'. For example, a threshold of 1% would predict peptides in any given protein sequence which belong to the 1% best scoring natural peptides. Peptides with score greater than or equal to corresponding threshold value will be predicted as binder