| DB ID | MyCo_5540 |
| Title | Discovery and Chromosomal Location a Highly Effective Oat Crown Rust Resistance Gene Pc50-5 |
| Year | 2021 |
| PMID | 34681841 |
| Fungal Diseases involved | Crown rust |
| Associated Medical Condition | None |
| Genus | Puccinia |
| Species | coronata |
| Organism | Puccinia coronata f. spp. avenae |
| Ethical Statement | None |
| Site of Infection | None |
| Opportunistic invasive | None |
| Sample type | Plant extracts |
| Sample source | Plant extracts |
| Host Group | Plant |
| Host Common name | Oat |
| Host Scientific name | Avena sativa |
| Biomarker Name | 5426978_SCAR Pc50-5 |
| Biomarker Full Name | 5426978_SCAR Pc50-5 |
| Biomarker Type | Diagnostic |
| Biomolecule | Gene |
| Geographical Location | Poland |
| Cohort | P. coronata f. sp. avenae pathotypes used in the study were selected from a wide collection of single pustule isolates derived from populations collected in Poland in the years 2010–2019, dried and stored in 1.5-mL microfuge tubes at−70◦C. |
| Cohort No. | None |
| Age Group | None |
| P Value | None |
| Sensitivity | None |
| Specificity | None |
| Positive Predictive Value | None |
| MIC | None |
| Fold Change | None |
| Pathway | None |
| Disease Introduction Mechanism | Crown rust, caused by Puccinia coronata f. sp. avenae, is one of the most devastating fungal diseases of oat in the world. The application of fungicides in oat cultivation may be economically unjustified and is potentially harmful to the environment. Thus, growing disease-resistant oat cultivars is the most effective strategy for controlling crown rust. Therefore, it is important to develop genetically resistant genotypes. |
| Technique | PCR |
| Analysis Method | PCR-based SCAR (sequence-characterized amplified region) markers analysis |
| ELISA kits | None |
| Assay Data | None |
| Validation Techniques used | PCR-based SCAR (sequence-characterized amplified region) markers analysis |
| Up Regulation Down Regulation | Positive |
| Sequence Data | None |
| External Link | None |
