BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00002 1396 89 len=1308
(1308 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218239.2 [gene=Rv3722c] [protein=hypoth... 2593 0.0
>lcl|NC_000962.2_cdsid_NP_218239.2 [gene=Rv3722c]
[protein=hypothetical protein] [protein_id=NP_218239.2]
[location=complement(4166821..4168128)]
Length = 1308
Score = 2593 bits (1308), Expect = 0.0
Identities = 1308/1308 (100%)
Strand = Plus / Plus
Query: 1 gtgtcgttcgactctcttagcccccaagagctagcggcactacacgcacgccatcagcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgtcgttcgactctcttagcccccaagagctagcggcactacacgcacgccatcagcag 60
Query: 61 gattatgcggcgcttcagggcatgaagctggctctggatctcacccgcggcaaaccatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gattatgcggcgcttcagggcatgaagctggctctggatctcacccgcggcaaaccatcc 120
Query: 121 gcagagcagctcgacctgtcgaaccagctgctgagcttgcccggagacgactaccgcgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcagagcagctcgacctgtcgaaccagctgctgagcttgcccggagacgactaccgcgac 180
Query: 181 ccggagggcaccgacacccgcaactatggtggccagcacggcctgccgggcctgcgggct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccggagggcaccgacacccgcaactatggtggccagcacggcctgccgggcctgcgggct 240
Query: 241 atcttcgccgaactgctcggcatcgcagtgcccaacctgatcgcgggcaacaactccagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atcttcgccgaactgctcggcatcgcagtgcccaacctgatcgcgggcaacaactccagc 300
Query: 301 ctggaattgatgcacgacatcgtcgccttctccatgttgtatggcggcgtggactcgccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctggaattgatgcacgacatcgtcgccttctccatgttgtatggcggcgtggactcgccg 360
Query: 361 cggccttggattcaggagcaggacggcatcaaattcctgtgcccggtccccggctatgac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cggccttggattcaggagcaggacggcatcaaattcctgtgcccggtccccggctatgac 420
Query: 421 cggcactttgccatcaccgagaccatgggcatcgagatgatcccgatacccatgctgcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cggcactttgccatcaccgagaccatgggcatcgagatgatcccgatacccatgctgcag 480
Query: 481 gatgggcccgacgtcgatctgatcgaagaactggttgccgtcgacccagccatcaagggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gatgggcccgacgtcgatctgatcgaagaactggttgccgtcgacccagccatcaagggg 540
Query: 541 atgtggacggtaccggtcttcggcaacccttcgggcgtcacctattcctgggaaacggtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atgtggacggtaccggtcttcggcaacccttcgggcgtcacctattcctgggaaacggtt 600
Query: 601 cgccgactcgtccagatgcggacggcggcacctgacttccgcttgttctgggacaacgcg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cgccgactcgtccagatgcggacggcggcacctgacttccgcttgttctgggacaacgcg 660
Query: 661 tatgcggtgcataccctgacgctggatttcccgcgccaggtcgacgtgctcgggctggcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tatgcggtgcataccctgacgctggatttcccgcgccaggtcgacgtgctcgggctggcc 720
Query: 721 gccaaggccggcaaccccaaccgcccctacgtcttcgcgtccacctcgaagatcaccttc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gccaaggccggcaaccccaaccgcccctacgtcttcgcgtccacctcgaagatcaccttc 780
Query: 781 gccggcggcggtgtcagcttcttcggtggatcgttaggcaacatcgcctggtatctgcag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gccggcggcggtgtcagcttcttcggtggatcgttaggcaacatcgcctggtatctgcag 840
Query: 841 tacgccgggaagaagtcgatcggcccggacaaggtcaaccagctgcggcatctacgcttc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tacgccgggaagaagtcgatcggcccggacaaggtcaaccagctgcggcatctacgcttc 900
Query: 901 ttcggcgacgccgatggggtacgtctacacatgttgcgtcaccagcagatactggcgccg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ttcggcgacgccgatggggtacgtctacacatgttgcgtcaccagcagatactggcgccg 960
Query: 961 aaattcgcgttggtggccgaagttctggatcagcggctaagcgagtccaagatcgcctcc 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 aaattcgcgttggtggccgaagttctggatcagcggctaagcgagtccaagatcgcctcc 1020
Query: 1021 tggaccgagcccaagggtggctacttcatcagcctcgacgtgttgcccgggaccgcgcgc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 tggaccgagcccaagggtggctacttcatcagcctcgacgtgttgcccgggaccgcgcgc 1080
Query: 1081 cggaccgtagccttggctaaggacgttggtatcgcggtgaccgaggcgggggcgtcgttc 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 cggaccgtagccttggctaaggacgttggtatcgcggtgaccgaggcgggggcgtcgttc 1140
Query: 1141 ccgtatcgaaaggatccggacgacaagaacatccggatcgcgccgtcgtttccgtcggta 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 ccgtatcgaaaggatccggacgacaagaacatccggatcgcgccgtcgtttccgtcggta 1200
Query: 1201 ccggacctgcgcaacgcggttgacgggttggcgacctgcgcgctgctggcggcgaccgag 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ccggacctgcgcaacgcggttgacgggttggcgacctgcgcgctgctggcggcgaccgag 1260
Query: 1261 acattgcttaaccagggactagcctcctcggcgccgaacgtgcgctga 1308
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 acattgcttaaccagggactagcctcctcggcgccgaacgtgcgctga 1308
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00006 2342 2199 len=144
(144 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218240.1 [gene=Rv3723] [protein=transme... 285 4e-78
>lcl|NC_000962.2_cdsid_NP_218240.1 [gene=Rv3723]
[protein=transmembrane protein] [protein_id=NP_218240.1]
[location=4168536..4169300]
Length = 765
Score = 285 bits (144), Expect = 4e-78
Identities = 144/144 (100%)
Strand = Plus / Minus
Query: 1 gtgttctcggcttcttcggcggcttccggctcagcctcgtcgcccttggccgtcttcttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 gtgttctcggcttcttcggcggcttccggctcagcctcgtcgcccttggccgtcttcttg 480
Query: 61 cggcgaaggcgtcgctgcttgggtttcttcggcttgagcggcttcggcggtggcggcggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 cggcgaaggcgtcgctgcttgggtttcttcggcttgagcggcttcggcggtggcggcggc 420
Query: 121 agctcggcgacaaacgacaggtag 144
||||||||||||||||||||||||
Sbjct: 419 agctcggcgacaaacgacaggtag 396
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00007 3323 4411 len=1089
(1089 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218242.1 [gene=Rv3725] [protein=oxidore... 1844 0.0
lcl|NC_000962.2_cdsid_YP_178008.1 [gene=cut5b] [protein=cutinase... 228 7e-60
>lcl|NC_000962.2_cdsid_NP_218242.1 [gene=Rv3725]
[protein=oxidoreductase] [protein_id=NP_218242.1]
[location=4170214..4171143]
Length = 930
Score = 1844 bits (930), Expect = 0.0
Identities = 930/930 (100%)
Strand = Plus / Plus
Query: 160 atgcagaatgccaccatgcgcgttctggtcaccggcggtacgggatttgtgggcgggtgg 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgcagaatgccaccatgcgcgttctggtcaccggcggtacgggatttgtgggcgggtgg 60
Query: 220 actgccaaagccatcgctgacgcgggccactccgtccggttcctggtgcgaaatcccgca 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 actgccaaagccatcgctgacgcgggccactccgtccggttcctggtgcgaaatcccgca 120
Query: 280 cggctgaagacgtctgtcgcgaaactgggcgtcgacgtgtcggactttgcggttgcagac 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cggctgaagacgtctgtcgcgaaactgggcgtcgacgtgtcggactttgcggttgcagac 180
Query: 340 atatccgaccgcgattcggtacgggaggcgttgaacggatgcgacgccgtcgtgcacagc 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atatccgaccgcgattcggtacgggaggcgttgaacggatgcgacgccgtcgtgcacagc 240
Query: 400 gccgcgctggtggcaaccgacccgcgtgagacttcgcggatgctgagtacgaacatggcg 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gccgcgctggtggcaaccgacccgcgtgagacttcgcggatgctgagtacgaacatggcg 300
Query: 460 ggcgcccaaaatgttctcggtcaagccgtcgagctcggaatggatccgatcgtgcatgtg 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggcgcccaaaatgttctcggtcaagccgtcgagctcggaatggatccgatcgtgcatgtg 360
Query: 520 tcgagcttcacggcgctgtttcgtcccaacttggcgacgctgagcgctgatctgccggtt 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcgagcttcacggcgctgtttcgtcccaacttggcgacgctgagcgctgatctgccggtt 420
Query: 580 gccggtgggacggatggatacggacaatccaaagcgcagatcgaaatctatgcgcgcggt 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gccggtgggacggatggatacggacaatccaaagcgcagatcgaaatctatgcgcgcggt 480
Query: 640 cttcaggacgccggcgcaccggtgaacatcacttatcctggcatggtcctcggcccgccg 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cttcaggacgccggcgcaccggtgaacatcacttatcctggcatggtcctcggcccgccg 540
Query: 700 gtgggcgatcaattcggtgaagccggggagggtgtccggtccgcattgtggatgcatgtc 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtgggcgatcaattcggtgaagccggggagggtgtccggtccgcattgtggatgcatgtc 600
Query: 760 attcccgggcgcggcgcggcgtggttgatcgtcgacgtccgagatgtggcggcactgcac 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 attcccgggcgcggcgcggcgtggttgatcgtcgacgtccgagatgtggcggcactgcac 660
Query: 820 gcggcgttgttggaatccgggcgtgggccgcgccgctacactgcgggaggtcatcggatt 879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gcggcgttgttggaatccgggcgtgggccgcgccgctacactgcgggaggtcatcggatt 720
Query: 880 ccggtgcccgagctcgcgaaaattctgggcgggtcgccggcaccacgatgctggccgtcc 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccggtgcccgagctcgcgaaaattctgggcgggtcgccggcaccacgatgctggccgtcc 780
Query: 940 cggtgcccgattccgcgctgcgtgtcgcgggatcggtgctggatcaagccgggccctatc 999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 cggtgcccgattccgcgctgcgtgtcgcgggatcggtgctggatcaagccgggccctatc 840
Query: 1000 tgcctttcaatactccgttcaccgcggcaggtatgcagtactacacacagatgccggagt 1059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tgcctttcaatactccgttcaccgcggcaggtatgcagtactacacacagatgccggagt 900
Query: 1060 ccgacgattcgccgagcgaaaaagaactag 1089
||||||||||||||||||||||||||||||
Sbjct: 901 ccgacgattcgccgagcgaaaaagaactag 930
>lcl|NC_000962.2_cdsid_YP_178008.1 [gene=cut5b] [protein=cutinase]
[protein_id=YP_178008.1] [location=4169606..4170169]
Length = 564
Score = 228 bits (115), Expect = 7e-60
Identities = 115/115 (100%)
Strand = Plus / Plus
Query: 1 gtgtgccgatggcgactcgatttgtggcgacggcaacagcccggtcgcgcatggcctgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 gtgtgccgatggcgactcgatttgtggcgacggcaacagcccggtcgcgcatggcctgta 509
Query: 61 cgcggtgaacggcatggtaggccagggcgcgaatttcgccgccagccgcctgtag 115
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 cgcggtgaacggcatggtaggccagggcgcgaatttcgccgccagccgcctgtag 564
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00008 4625 4479 len=147
(147 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00009 4689 5882 len=1194
(1194 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218243.1 [gene=Rv3726] [protein=dehydro... 2367 0.0
>lcl|NC_000962.2_cdsid_NP_218243.1 [gene=Rv3726]
[protein=dehydrogenase] [protein_id=NP_218243.1]
[location=4171421..4172614]
Length = 1194
Score = 2367 bits (1194), Expect = 0.0
Identities = 1194/1194 (100%)
Strand = Plus / Plus
Query: 1 atgaaggcggtgacctgcaccaacgcaaagctcgaggtagtcgaccggccgtccccggcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgaaggcggtgacctgcaccaacgcaaagctcgaggtagtcgaccggccgtccccggcg 60
Query: 61 ccggccaagggtcaactgttgctcgatgtgctgcggtgcggtatctgcggatcggacctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccggccaagggtcaactgttgctcgatgtgctgcggtgcggtatctgcggatcggacctg 120
Query: 121 catgcccgcttgcactgtgatgaactggccgacgtgatggccgaatctggctaccacgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 catgcccgcttgcactgtgatgaactggccgacgtgatggccgaatctggctaccacgcc 180
Query: 181 ttcatgcgatcgaatcagcaggtggtgttcggacacgagttctgtggcgaggtggtcgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttcatgcgatcgaatcagcaggtggtgttcggacacgagttctgtggcgaggtggtcgat 240
Query: 241 tacggtcccggcacccgcaggacccctaggcgcggcaccccggtcgtcgccatgccgctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tacggtcccggcacccgcaggacccctaggcgcggcaccccggtcgtcgccatgccgctg 300
Query: 301 ctgcggcgtggcaacaaagaggtgcacgggatcgggctttcgacaatggcgccgggcgcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctgcggcgtggcaacaaagaggtgcacgggatcgggctttcgacaatggcgccgggcgcc 360
Query: 361 tacgccgagcggctcgtcgtcgagcagtcgctgacgtttcctgtcccgaacgggctggcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tacgccgagcggctcgtcgtcgagcagtcgctgacgtttcctgtcccgaacgggctggcg 420
Query: 421 cccgagatagccgcgctgaccgagcccatggccgtcggatggcacgccgtccggcgcggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cccgagatagccgcgctgaccgagcccatggccgtcggatggcacgccgtccggcgcggc 480
Query: 481 gaggtgggcaagggcgacgtcgcgatcgtgatcgggtgcggtccgatcggcctcgcggtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaggtgggcaagggcgacgtcgcgatcgtgatcgggtgcggtccgatcggcctcgcggtg 540
Query: 541 atctgcatgctgaagtcgcgcggggtacacacggtgatcgcaagcgacttttcacccggc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atctgcatgctgaagtcgcgcggggtacacacggtgatcgcaagcgacttttcacccggc 600
Query: 601 cgtcgtgccctcgcaaccgcctgtggcgctgattccgtagtcgatcccgtacaggactca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cgtcgtgccctcgcaaccgcctgtggcgctgattccgtagtcgatcccgtacaggactca 660
Query: 661 ccgtatgcggtagccgccggccttggacagggaaacagacacctgcaaagcatcctcgac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ccgtatgcggtagccgccggccttggacagggaaacagacacctgcaaagcatcctcgac 720
Query: 721 gcgttcgacctcgcagtcggcacggtcgaaagactgcagcggctgcggctgccgtggtgg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gcgttcgacctcgcagtcggcacggtcgaaagactgcagcggctgcggctgccgtggtgg 780
Query: 781 cacctttggcgggctgccgaagcagctggcgccgcaacgccaaagcgtccagtcatcttc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 cacctttggcgggctgccgaagcagctggcgccgcaacgccaaagcgtccagtcatcttc 840
Query: 841 gaatgtgttggcgttccgggaattatcgatggcatcatcgccagcgcaccgctgttctcg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gaatgtgttggcgttccgggaattatcgatggcatcatcgccagcgcaccgctgttctcg 900
Query: 901 cgcgtcgtcgtggtcggcgtctgcatgggctcagaccacatccggccggcgatggcgatc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 cgcgtcgtcgtggtcggcgtctgcatgggctcagaccacatccggccggcgatggcgatc 960
Query: 961 aacaaagagatcaacctgcggttcgtcctcggctacacaccgttagagttccgcgacacg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 aacaaagagatcaacctgcggttcgtcctcggctacacaccgttagagttccgcgacacg 1020
Query: 1021 ttgcacatgctggccgacggcaaggtcaacgccgcgccgctgatcaccgggacggtcggt 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 ttgcacatgctggccgacggcaaggtcaacgccgcgccgctgatcaccgggacggtcggt 1080
Query: 1081 ttacccggcgtggcggcagcattcgatgcgctcggcgatcccgaggcgcacgcaaaaatc 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ttacccggcgtggcggcagcattcgatgcgctcggcgatcccgaggcgcacgcaaaaatc 1140
Query: 1141 atgatcgaccccaagagcaacgccgcgagtccccaaccattccgcgtggagtga 1194
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 atgatcgaccccaagagcaacgccgcgagtccccaaccattccgcgtggagtga 1194
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00011 6223 8031 len=1809
(1809 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218244.1 [gene=Rv3727] [protein=oxidore... 3586 0.0
>lcl|NC_000962.2_cdsid_NP_218244.1 [gene=Rv3727]
[protein=oxidoreductase] [protein_id=NP_218244.1]
[location=4172955..4174763]
Length = 1809
Score = 3586 bits (1809), Expect = 0.0
Identities = 1809/1809 (100%)
Strand = Plus / Plus
Query: 1 atgaaaccgtcgcctgccgatacccacgtcgtgattgccggtgctggcatcgcgggattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgaaaccgtcgcctgccgatacccacgtcgtgattgccggtgctggcatcgcgggattg 60
Query: 61 gctgccgccatgatcctggccgaagccggggtgcgagtcacattgtgcgaagctgcatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gctgccgccatgatcctggccgaagccggggtgcgagtcacattgtgcgaagctgcatcc 120
Query: 121 gaagctgggggcaaggccaagagtttacgtctcgcggacggccacccgaccgagcacagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaagctgggggcaaggccaagagtttacgtctcgcggacggccacccgaccgagcacagt 180
Query: 181 ttgcgggtttacaccgatacttaccaaaccctgctgacgctgttctcgcgtatacccacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgcgggtttacaccgatacttaccaaaccctgctgacgctgttctcgcgtatacccacc 240
Query: 241 gaacatgacaggaccgtgctagacaacctggtcggcgtcagcatggtttcggctaccgcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaacatgacaggaccgtgctagacaacctggtcggcgtcagcatggtttcggctaccgcg 300
Query: 301 caaggcgtgattggccgaatcgctgcgccagttgccttgcaacgccggcggccaaccttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caaggcgtgattggccgaatcgctgcgccagttgccttgcaacgccggcggccaaccttc 360
Query: 361 gcgcggatcataggcaaggtagtcgaaccgccgcggcaacttgtccggatcttgttgcgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcgcggatcataggcaaggtagtcgaaccgccgcggcaacttgtccggatcttgttgcgc 420
Query: 421 ggcccaatggtaatcgttggtctggcccaacgaggtgtgccggccaccgacgtcctccat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggcccaatggtaatcgttggtctggcccaacgaggtgtgccggccaccgacgtcctccat 480
Query: 481 tacctctacgcccatctacggctgctgtggatgtgccgagagcgactcttggcggagctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tacctctacgcccatctacggctgctgtggatgtgccgagagcgactcttggcggagctg 540
Query: 541 ggcgatatctcgtatgcggattatctgcagctcggctgcaagtctgcccaggcgcaggaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggcgatatctcgtatgcggattatctgcagctcggctgcaagtctgcccaggcgcaggaa 600
Query: 601 ttcttttctgctgtgccgcgcatttacgtcgcggcgcgcaccagtgccgaagcggcggcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttcttttctgctgtgccgcgcatttacgtcgcggcgcgcaccagtgccgaagcggcggcc 660
Query: 661 attgcgcccatcgttctcaaggggctgtttcgcctgaaaagtaattgtccatcagccctc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 attgcgcccatcgttctcaaggggctgtttcgcctgaaaagtaattgtccatcagccctc 720
Query: 721 aacgacgcaaagctgcccgcgatcatgatgatggatggaccgaccagcgagcgcatggtc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aacgacgcaaagctgcccgcgatcatgatgatggatggaccgaccagcgagcgcatggtc 780
Query: 781 gatccctggattcgccacctgacaaggctcggcgtggacatccacttcaacacgcgtgtc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gatccctggattcgccacctgacaaggctcggcgtggacatccacttcaacacgcgtgtc 840
Query: 841 ggcgatctcgagttcgacgacggtcgcgtcaccgcattgatatcgtccgatggccgccgg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ggcgatctcgagttcgacgacggtcgcgtcaccgcattgatatcgtccgatggccgccgg 900
Query: 901 tttgcctgcgactatgccctgctcgcggtgccctatctgacgctgcgagagctggccaaa 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 tttgcctgcgactatgccctgctcgcggtgccctatctgacgctgcgagagctggccaaa 960
Query: 961 tcagctcatgtcaagcgatatctccctcagctcacacagcagcacgcccttgcgcttgag 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 tcagctcatgtcaagcgatatctccctcagctcacacagcagcacgcccttgcgcttgag 1020
Query: 1021 gcatcgaacggaatccagtgttttctgcgcgacctccctgcgacgtggcctccgttcatc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gcatcgaacggaatccagtgttttctgcgcgacctccctgcgacgtggcctccgttcatc 1080
Query: 1081 cgccctggagtcgtcactacgcatctgcaaagccagtggtcgctggtctgcgttctgcag 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 cgccctggagtcgtcactacgcatctgcaaagccagtggtcgctggtctgcgttctgcag 1140
Query: 1141 ggagaaggtttctggaaaaacgtccgcctgccggaaggaacccgctacgttctgtcaata 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 ggagaaggtttctggaaaaacgtccgcctgccggaaggaacccgctacgttctgtcaata 1200
Query: 1201 acctggagtgatgtggaaacgcccggacctgtttttgatcggccattgagtgaatgtacg 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 acctggagtgatgtggaaacgcccggacctgtttttgatcggccattgagtgaatgtacg 1260
Query: 1261 ccagatgagatcttgaccgagtgcctgacgcagtgcggcctcgataaatcgaacgtcttg 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 ccagatgagatcttgaccgagtgcctgacgcagtgcggcctcgataaatcgaacgtcttg 1320
Query: 1321 ggctggcggatcgatcacgagctgaagcacttagacgaggccgaatacgaaaaggtggcg 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 ggctggcggatcgatcacgagctgaagcacttagacgaggccgaatacgaaaaggtggcg 1380
Query: 1381 agcgagctgcctcctcatcttgtctcggcgcctgcgcgcgggcagcgcatggtgaatttc 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 agcgagctgcctcctcatcttgtctcggcgcctgcgcgcgggcagcgcatggtgaatttc 1440
Query: 1441 tcgccgcttaccgtattgatgccgggcgcgcgccaccgctccccgggtatttgcacctca 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 tcgccgcttaccgtattgatgccgggcgcgcgccaccgctccccgggtatttgcacctca 1500
Query: 1501 gtgcctaaccttttgctagccggtgaggtgatctattcacccgacctgaccttgtttgtt 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 gtgcctaaccttttgctagccggtgaggtgatctattcacccgacctgaccttgtttgtt 1560
Query: 1561 ccgaccatggagaaggcggcatgctccggctatctggccgcccgccaaatcatgaacatg 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 ccgaccatggagaaggcggcatgctccggctatctggccgcccgccaaatcatgaacatg 1620
Query: 1621 gttgcttcgcacgccgcaccgctgcggatcgacttccgggatcccgccccatttgcggtt 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 gttgcttcgcacgccgcaccgctgcggatcgacttccgggatcccgccccatttgcggtt 1680
Query: 1681 ctgcggcgggtggaccgatggttttggagccgccgccgacgaccgccagaccggtcgaca 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 ctgcggcgggtggaccgatggttttggagccgccgccgacgaccgccagaccggtcgaca 1740
Query: 1741 tttgcaaccccaccaaccgccatgccggcgccgagccacctgaccgacgtggatcgctct 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 tttgcaaccccaccaaccgccatgccggcgccgagccacctgaccgacgtggatcgctct 1800
Query: 1801 gcaagttag 1809
|||||||||
Sbjct: 1801 gcaagttag 1809
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00020 8123 11338 len=3216
(3216 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218245.1 [gene=Rv3728] [protein=hypothe... 6340 0.0
lcl|NC_000962.2_cdsid_NP_217756.1 [gene=Rv3239c] [protein=transm... 86 2e-16
>lcl|NC_000962.2_cdsid_NP_218245.1 [gene=Rv3728] [protein=hypothetical
protein] [protein_id=NP_218245.1]
[location=4174873..4178070]
Length = 3198
Score = 6340 bits (3198), Expect = 0.0
Identities = 3198/3198 (100%)
Strand = Plus / Plus
Query: 19 gtgcacaccgtcgccaccaacaatgctgcgcccgtcatagccgccggtcccgtcggccct 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgcacaccgtcgccaccaacaatgctgcgcccgtcatagccgccggtcccgtcggccct 60
Query: 79 agcagacgacgccgtcgcgtgcacgccccacttacgcgacgccgccaaccctcctcctcg 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agcagacgacgccgtcgcgtgcacgccccacttacgcgacgccgccaaccctcctcctcg 120
Query: 139 gcggtgctgctggtggcggctttcggcgccttcctcgctttccttgactccacgatcgtc 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcggtgctgctggtggcggctttcggcgccttcctcgctttccttgactccacgatcgtc 180
Query: 199 aacgtcgcgttccccgatatccagcggcacttccacagcgacatcagtgacctgtcctgg 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aacgtcgcgttccccgatatccagcggcacttccacagcgacatcagtgacctgtcctgg 240
Query: 259 atgctcaacgcctacaacattgttttcgcggcgttcctggtggccgccggcaggctggcc 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgctcaacgcctacaacattgttttcgcggcgttcctggtggccgccggcaggctggcc 300
Query: 319 gacctgatggggcgcaagcgggtgttcatcttgggggtggcgttgttcaccgtcgcgtcc 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gacctgatggggcgcaagcgggtgttcatcttgggggtggcgttgttcaccgtcgcgtcc 360
Query: 379 gggctgtgcgcgatcgccgaaagcgtcggggaactggttgcgttccgtgtgctgcaaggc 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gggctgtgcgcgatcgccgaaagcgtcggggaactggttgcgttccgtgtgctgcaaggc 420
Query: 439 atcggcgcagcggttctggtaccggcttcgctggggctggtcgtcgaggccttcccggcc 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atcggcgcagcggttctggtaccggcttcgctggggctggtcgtcgaggccttcccggcc 480
Query: 499 gagcggcgcgcgcacggggtcaacctgtggggtgcggcgggggccatcgccgcgggcctc 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gagcggcgcgcgcacggggtcaacctgtggggtgcggcgggggccatcgccgcgggcctc 540
Query: 559 ggcccgccgatcggtggcgccctcatcgaggcggatggctggcggtgggtgttcctggtg 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggcccgccgatcggtggcgccctcatcgaggcggatggctggcggtgggtgttcctggtg 600
Query: 619 aaccttccgctgggggtattcgctgtgctggccgctcggcgggcactggtggagaaccgg 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaccttccgctgggggtattcgctgtgctggccgctcggcgggcactggtggagaaccgg 660
Query: 679 gccgccggacgtcggcgtgtgcccgacgtgcgcggcgcggtgctgctggctttcgcgctg 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gccgccggacgtcggcgtgtgcccgacgtgcgcggcgcggtgctgctggctttcgcgctg 720
Query: 739 ggccttttgacgctgggattgatcaagggcccggattggggttgggccagcctgccgacc 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ggccttttgacgctgggattgatcaagggcccggattggggttgggccagcctgccgacc 780
Query: 799 agcgggtcattgctggccgcggcggtcgcgatggttgggtttgtgatgagctcacgacac 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 agcgggtcattgctggccgcggcggtcgcgatggttgggtttgtgatgagctcacgacac 840
Query: 859 cacccggcaccgatggtcgagcccacgctgttgcgcatccagtcgttcgtggccggcacc 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 cacccggcaccgatggtcgagcccacgctgttgcgcatccagtcgttcgtggccggcacc 900
Query: 919 gggctgaccgccgtggccagcgccggcttctacgcctatctgctgacgcacgtgctgttc 978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gggctgaccgccgtggccagcgccggcttctacgcctatctgctgacgcacgtgctgttc 960
Query: 979 ctcaactacgtctggggttacacgctgctggaggctggcatggccgtcgcccccgccgcg 1038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ctcaactacgtctggggttacacgctgctggaggctggcatggccgtcgcccccgccgcg 1020
Query: 1039 ctggtcgccgccgtcgtcgcggcggtgcttggccgcgtcgccgaccggcacggttaccgc 1098
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 ctggtcgccgccgtcgtcgcggcggtgcttggccgcgtcgccgaccggcacggttaccgc 1080
Query: 1099 ttcatcgtcggcatcggcgcgttgatctgggctgccagcctgctgtggtatctcaaggtt 1158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ttcatcgtcggcatcggcgcgttgatctgggctgccagcctgctgtggtatctcaaggtt 1140
Query: 1159 gtcgggtcccagcccgatttcctcggtgaatggctgcccggccagatactgcagggaatc 1218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gtcgggtcccagcccgatttcctcggtgaatggctgcccggccagatactgcagggaatc 1200
Query: 1219 ggggtgggcgctaccttcccgctgctcggcagtgccgccttggcccggctggccaagggc 1278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ggggtgggcgctaccttcccgctgctcggcagtgccgccttggcccggctggccaagggc 1260
Query: 1279 ggcagctacgccaccgcttcggcggtgaccggcaccatccgccaggttggcgccgtcatc 1338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 ggcagctacgccaccgcttcggcggtgaccggcaccatccgccaggttggcgccgtcatc 1320
Query: 1339 ggcgtcgcggtgctggtgatcctggtcggcacaccggcaccgggcgcagccgaagaggcg 1398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 ggcgtcgcggtgctggtgatcctggtcggcacaccggcaccgggcgcagccgaagaggcg 1380
Query: 1399 ttgcgtcacgggtgggcgttggccgcgatctgtttcgtggcggtggggatcggggcgctg 1458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 ttgcgtcacgggtgggcgttggccgcgatctgtttcgtggcggtggggatcggggcgctg 1440
Query: 1459 tcgctgggtcgcatccgcccagtcccagctgcggttgaacccccgccggggccgccggtg 1518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 tcgctgggtcgcatccgcccagtcccagctgcggttgaacccccgccggggccgccggtg 1500
Query: 1519 gctccgttgggagcgcggcggccgccgagacccgcaccggtggcctcacccgccgcggca 1578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 gctccgttgggagcgcggcggccgccgagacccgcaccggtggcctcacccgccgcggca 1560
Query: 1579 gtggccccgacccccaagacttcccgcgaagtcaacctgctggaggctctgcggtttgcc 1638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 gtggccccgacccccaagacttcccgcgaagtcaacctgctggaggctctgcggtttgcc 1620
Query: 1639 aggccggacacgcaacagattgagctgcaagcaggctcgtatttgttccacgcgggcgat 1698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 aggccggacacgcaacagattgagctgcaagcaggctcgtatttgttccacgcgggcgat 1680
Query: 1699 gtgtccgatgcgctctacgtggtgcgcagcggccgcctgcaagtcctcgccggcgacggc 1758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 gtgtccgatgcgctctacgtggtgcgcagcggccgcctgcaagtcctcgccggcgacggc 1740
Query: 1759 gcaaaggacgaagtggtggccgagctgggccgtggtcaggtggtcggggagctcggggtg 1818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 gcaaaggacgaagtggtggccgagctgggccgtggtcaggtggtcggggagctcggggtg 1800
Query: 1819 ctgctcgatgcgccgcggtccgcgtcggttcgtgcggtacgcgactcgtccctgatgcga 1878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 ctgctcgatgcgccgcggtccgcgtcggttcgtgcggtacgcgactcgtccctgatgcga 1860
Query: 1879 gtgaccaaggccgaattcgcgaagatcgccgatgccggggtgcttggggcgctggcgggg 1938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 gtgaccaaggccgaattcgcgaagatcgccgatgccggggtgcttggggcgctggcgggg 1920
Query: 1939 gtactggccaaacgacagcaccagacacgcgtggcctctcagcggacaacgccggaggtc 1998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 gtactggccaaacgacagcaccagacacgcgtggcctctcagcggacaacgccggaggtc 1980
Query: 1999 gttgtcgcggtcgtcggtgtcgacgccaatgcaccggtcgcaatggtggccaccgaattg 2058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1981 gttgtcgcggtcgtcggtgtcgacgccaatgcaccggtcgcaatggtggccaccgaattg 2040
Query: 2059 tgcagggcactgtcgacacggctacgtgctgtcgcccccggccgggtcgactgcgacggg 2118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2041 tgcagggcactgtcgacacggctacgtgctgtcgcccccggccgggtcgactgcgacggg 2100
Query: 2119 ttggaacgtgccgagcagaccgccgaccgggtggtgctgcatgcggccgtcggcgacgcg 2178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2101 ttggaacgtgccgagcagaccgccgaccgggtggtgctgcatgcggccgtcggcgacgcg 2160
Query: 2179 cggtggcgggaattctgtttgcgtgtcgccgatcgcgtggtgctggtggccagcaacccg 2238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2161 cggtggcgggaattctgtttgcgtgtcgccgatcgcgtggtgctggtggccagcaacccg 2220
Query: 2239 gccgtgcctgtggccccgctgccgacccgagcgaccggcgccgacctggtgctggccgga 2298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2221 gccgtgcctgtggccccgctgccgacccgagcgaccggcgccgacctggtgctggccgga 2280
Query: 2299 cggcccgccggccgggagcaccgacgtgcctgggagcagttgatcacgccgcggtcgatg 2358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2281 cggcccgccggccgggagcaccgacgtgcctgggagcagttgatcacgccgcggtcgatg 2340
Query: 2359 catgtggtccgacgcgaatttgtcgccgacgacctgcgggtgctcgccacgcgtatcgcg 2418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2341 catgtggtccgacgcgaatttgtcgccgacgacctgcgggtgctcgccacgcgtatcgcg 2400
Query: 2419 ggccgttccgtggggctagtcctcagcggtggggcagcgagggcgtgtgcccacttgggc 2478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2401 ggccgttccgtggggctagtcctcagcggtggggcagcgagggcgtgtgcccacttgggc 2460
Query: 2479 gtgctggaggaactggaggccgccggggtcaccgtcgaccgctttgccggcaccagcatg 2538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2461 gtgctggaggaactggaggccgccggggtcaccgtcgaccgctttgccggcaccagcatg 2520
Query: 2539 ggcgcaatcatcgcggctctggcggccagcggtttggatgctgccggggtggatgcgcaa 2598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2521 ggcgcaatcatcgcggctctggcggccagcggtttggatgctgccggggtggatgcgcaa 2580
Query: 2599 atctacgagcacttcgtgcgcaagagccacggcgactacaccctgccgagcaaggggctg 2658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2581 atctacgagcacttcgtgcgcaagagccacggcgactacaccctgccgagcaaggggctg 2640
Query: 2659 atccgcgggaaacgcacccagtccacgctacgcacgatcttcggagaccatttggtggag 2718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2641 atccgcgggaaacgcacccagtccacgctacgcacgatcttcggagaccatttggtggag 2700
Query: 2719 gagctgccgaaacatttccgctgcgtcagtgtcgacctattggcccggcgtcccgtcgtg 2778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2701 gagctgccgaaacatttccgctgcgtcagtgtcgacctattggcccggcgtcccgtcgtg 2760
Query: 2779 caccgccaaggcccgctcgccgacgtcgtcggctgctcgatgcggctgccttttctgtat 2838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2761 caccgccaaggcccgctcgccgacgtcgtcggctgctcgatgcggctgccttttctgtat 2820
Query: 2839 gcgccactgccctacggcggcaccctgcacgtcgacggcggtgtgctggacaacgtgccc 2898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2821 gcgccactgccctacggcggcaccctgcacgtcgacggcggtgtgctggacaacgtgccc 2880
Query: 2899 gtcaccacgctggtgggcaaggacggcccactgattgcggtaaacgtggcctctggcgga 2958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2881 gtcaccacgctggtgggcaaggacggcccactgattgcggtaaacgtggcctctggcgga 2940
Query: 2959 aatccaagccccgcgtccggcggccatcgccgcggcaaaccacgggtgcccggcctaacc 3018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2941 aatccaagccccgcgtccggcggccatcgccgcggcaaaccacgggtgcccggcctaacc 3000
Query: 3019 gacaccctgctgcgcaccatgacaatcagcagcgcgatggcatcggaaaaagtgttggcc 3078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3001 gacaccctgctgcgcaccatgacaatcagcagcgcgatggcatcggaaaaagtgttggcc 3060
Query: 3079 caggccgacctggtgatcaagcccaacccgatcggcgtcggactcatggagtaccaccag 3138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3061 caggccgacctggtgatcaagcccaacccgatcggcgtcggactcatggagtaccaccag 3120
Query: 3139 atcgaccgcgcccgtgaagcgggccggatcgcggcccgtgaagcgttgccacaaatcatg 3198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3121 atcgaccgcgcccgtgaagcgggccggatcgcggcccgtgaagcgttgccacaaatcatg 3180
Query: 3199 gagctggtgcacggctga 3216
||||||||||||||||||
Sbjct: 3181 gagctggtgcacggctga 3198
>lcl|NC_000962.2_cdsid_NP_217756.1 [gene=Rv3239c]
[protein=transmembrane transport protein]
[protein_id=NP_217756.1]
[location=complement(3614457..3617603)]
Length = 3147
Score = 85.7 bits (43), Expect = 2e-16
Identities = 214/271 (78%)
Strand = Plus / Plus
Query: 362 tgttcaccgtcgcgtccgggctgtgcgcgatcgccgaaagcgtcggggaactggttgcgt 421
|||||||| | ||||||||||||||||| |||||| || |||| | | |||| ||||
Sbjct: 296 tgttcaccattgcgtccgggctgtgcgccgtcgccggcagtgtcgagcagttggtggcgt 355
Query: 422 tccgtgtgctgcaaggcatcggcgcagcggttctggtaccggcttcgctggggctggtcg 481
|||| |||||||| |||||||| || ||| | || || || |||||||| | |||||||
Sbjct: 356 tccgggtgctgcagggcatcggggctgcgatactcgtgcctgcttcgctcgcactggtcg 415
Query: 482 tcgaggccttcccggccgagcggcgcgcgcacggggtcaacctgtggggtgcggcggggg 541
| |||| |||| || | ||| |||||||||| || ||||||||||||||||| |
Sbjct: 416 ttgagggcttcgacgcggcgcgccgcgcgcacgctatcggcctgtggggtgcggcggcag 475
Query: 542 ccatcgccgcgggcctcggcccgccgatcggtggcgccctcatcgaggcggatggctggc 601
| ||||| || ||||| |||||||||||||| || |||| | ||| || |||||||
Sbjct: 476 cgatcgcggctggcctgggcccgccgatcggcgggctcctcgtggagtgggccggctggc 535
Query: 602 ggtgggtgttcctggtgaaccttccgctggg 632
|||||||||| ||||| || ||||||||||
Sbjct: 536 ggtgggtgttactggtcaatgttccgctggg 566
Score = 65.9 bits (33), Expect = 2e-10
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 140 cggtgctgctggtggcggctttcggcgccttcctcgctttccttgactccacgatcgtca 199
|||| |||||||| |||| |||||||| ||||| || || || ||||| || |||||||
Sbjct: 71 cggttctgctggtagcggggttcggcgctttcctggcgtttctcgactcgacaatcgtca 130
Query: 200 acgtcgcgttccccgatatccagcg 224
|| |||||||||| |||||||||||
Sbjct: 131 acatcgcgttcccggatatccagcg 155
Score = 65.9 bits (33), Expect = 2e-10
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 2278 gccgacctggtgctggccggacggcccgccggccgggagcaccgacgtgcctgggagcag 2337
|||||||| ||||||||||| | | ||||| ||||||||||||| ||| |||||| |
Sbjct: 2212 gccgacctcgtgctggccggtccggccgccagccgggagcaccggcgtcagtgggaggaa 2271
Query: 2338 ttgatcacgccgcggtcgatgcatgtggt 2366
|||||||||||||| ||| | ||||||||
Sbjct: 2272 ttgatcacgccgcgatcggttcatgtggt 2300
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 2502 cggggtcaccgtcgaccgctttgccggcaccagcatggg 2540
|||||||||| ||||||| || |||||||||||||||||
Sbjct: 2436 cggggtcaccatcgaccggttcgccggcaccagcatggg 2474
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00024 11364 13883 len=2520
(2520 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218246.1 [gene=Rv3729] [protein=transfe... 4621 0.0
>lcl|NC_000962.2_cdsid_NP_218246.1 [gene=Rv3729] [protein=transferase]
[protein_id=NP_218246.1] [location=4178285..4180615]
Length = 2331
Score = 4621 bits (2331), Expect = 0.0
Identities = 2331/2331 (100%)
Strand = Plus / Plus
Query: 190 atgttcgtcgaatacaccaagagcatctgccccgtctgcaaggtcgtggtcgacgcccag 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgttcgtcgaatacaccaagagcatctgccccgtctgcaaggtcgtggtcgacgcccag 60
Query: 250 gtcaatatccgccacgacaaggtgtatttgcgtaagcgctgccgcgagcacggaagtttc 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtcaatatccgccacgacaaggtgtatttgcgtaagcgctgccgcgagcacggaagtttc 120
Query: 310 gaggccctggtgtacggggatgcccagatgtatttggaatcagcacgattcaacaaaccg 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaggccctggtgtacggggatgcccagatgtatttggaatcagcacgattcaacaaaccg 180
Query: 370 ggcacctttccgctgcggtttcagaccgaggtgcgcgacggctgtcccagtgactgcggg 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcacctttccgctgcggtttcagaccgaggtgcgcgacggctgtcccagtgactgcggg 240
Query: 430 ctgtgcccggaccacaagcaacacgcctgcctggggttgatcgaggtcaacacacactgc 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctgtgcccggaccacaagcaacacgcctgcctggggttgatcgaggtcaacacacactgc 300
Query: 490 aacctggactgcccgatctgtttcgccgactctggccaccaacccgacggctacgccatc 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aacctggactgcccgatctgtttcgccgactctggccaccaacccgacggctacgccatc 360
Query: 550 accgcggcgcagtgtgaacggatgctcgacacgctcgttgccgccgagggtgaacccgaa 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 accgcggcgcagtgtgaacggatgctcgacacgctcgttgccgccgagggtgaacccgaa 420
Query: 610 gtggtgatgttctccggtggcgaaccgaccatccacaaacaactcctcgagttcgtcgac 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtggtgatgttctccggtggcgaaccgaccatccacaaacaactcctcgagttcgtcgac 480
Query: 670 gccgcccaggcccgcccggtcaagaccgtcatcatcaacaccaacggcatccggctggcc 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gccgcccaggcccgcccggtcaagaccgtcatcatcaacaccaacggcatccggctggcc 540
Query: 730 tccgaccggcgattcgtcgaccagctcgccacccgcaaccgtcccggccaccccgtgcac 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tccgaccggcgattcgtcgaccagctcgccacccgcaaccgtcccggccaccccgtgcac 600
Query: 790 atctacctgcagttcgacggcctggacgaggcaacacatcgtcgaatccggggccacgat 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atctacctgcagttcgacggcctggacgaggcaacacatcgtcgaatccggggccacgat 660
Query: 850 ctgcgggacgtaaagcagcgggccctggacaactgcgccgcggcgggcctgaccgtcagc 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ctgcgggacgtaaagcagcgggccctggacaactgcgccgcggcgggcctgaccgtcagc 720
Query: 910 ctggtggccgcggtggaacgcggcctcaacgagcacgagctcggcgcggtcatccgccac 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ctggtggccgcggtggaacgcggcctcaacgagcacgagctcggcgcggtcatccgccac 780
Query: 970 ggcatggcgcagcccggagtgcaaccggtggtatttcagccggtcacccacgccggccgg 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ggcatggcgcagcccggagtgcaaccggtggtatttcagccggtcacccacgccggccgg 840
Query: 1030 catgtgcagttcgacccgctgacccgactgaccaactccgacatcatcgcctgcatcacc 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 catgtgcagttcgacccgctgacccgactgaccaactccgacatcatcgcctgcatcacc 900
Query: 1090 gcgcaactgcccgaatggttcaggcccggtgacttctttccggtgccatgctgcttcccc 1149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gcgcaactgcccgaatggttcaggcccggtgacttctttccggtgccatgctgcttcccc 960
Query: 1150 agctgccgatcgatcacctacctgctcaccgacggggagcatgtggtcccgattccgcgg 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 agctgccgatcgatcacctacctgctcaccgacggggagcatgtggtcccgattccgcgg 1020
Query: 1210 ctgctcaatgtcgaggactacctcgactacgtctccaaccgggtgatccctgacctggcg 1269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 ctgctcaatgtcgaggactacctcgactacgtctccaaccgggtgatccctgacctggcg 1080
Query: 1270 atccgcgaagccttggagaacttgtggtcggcgtcggcggtgccaggcaccgacaccatg 1329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 atccgcgaagccttggagaacttgtggtcggcgtcggcggtgccaggcaccgacaccatg 1140
Query: 1330 accgcacagctacagcgggctaccgccgccctgaactgcgccgagggctgcgggatcaac 1389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 accgcacagctacagcgggctaccgccgccctgaactgcgccgagggctgcgggatcaac 1200
Query: 1390 ctgcccgaggccctcacgcacctcaccgaccgggtcttcgccatcgtcatccaagacttc 1449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ctgcccgaggccctcacgcacctcaccgaccgggtcttcgccatcgtcatccaagacttc 1260
Query: 1450 caggatccctacaccctcaacgtcaaacagctgatgaaatgctgcgtgcaacagatcacc 1509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 caggatccctacaccctcaacgtcaaacagctgatgaaatgctgcgtgcaacagatcacc 1320
Query: 1510 ccggacggacggctgatcccgttctgcgcctacaactcggtcggctatcgagagcaggtg 1569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 ccggacggacggctgatcccgttctgcgcctacaactcggtcggctatcgagagcaggtg 1380
Query: 1570 cgtgaacagctcaccggggtaccggtacccgacattgtgcccaatgccatcccactcgcc 1629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 cgtgaacagctcaccggggtaccggtacccgacattgtgcccaatgccatcccactcgcc 1440
Query: 1630 gggttgctggcggacgcaccacacggatcaaaacaggccaataccggtgggagtatcgcc 1689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 gggttgctggcggacgcaccacacggatcaaaacaggccaataccggtgggagtatcgcc 1500
Query: 1690 aggctcgcggggccaacccgaggtgcgccgatggcactgccaccacagcagatcaaagcg 1749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 aggctcgcggggccaacccgaggtgcgccgatggcactgccaccacagcagatcaaagcg 1560
Query: 1750 tgttgcgccgacgcctattcccgcgacatcgtcgccttgctactcggtgactcctttcac 1809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 tgttgcgccgacgcctattcccgcgacatcgtcgccttgctactcggtgactcctttcac 1620
Query: 1810 ccgggcggcgcgacattgacccgtaggttggctgaccaactcgggctgaggtcgacaggc 1869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 ccgggcggcgcgacattgacccgtaggttggctgaccaactcgggctgaggtcgacaggc 1680
Query: 1870 gacccgcggcgggtcgccgacatcgccgccgggcccggcgcctccgcacggctgctggcc 1929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 gacccgcggcgggtcgccgacatcgccgccgggcccggcgcctccgcacggctgctggcc 1740
Query: 1930 agcgactacggtgtggctgtcgacggggtcgacatcagcgagatcaacgtgaagcgcgcc 1989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 agcgactacggtgtggctgtcgacggggtcgacatcagcgagatcaacgtgaagcgcgcc 1800
Query: 1990 caagccgccgtcgcgcaaaccggcctgaccgagcgggtgcgcttccacctgggcgacgcc 2049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 caagccgccgtcgcgcaaaccggcctgaccgagcgggtgcgcttccacctgggcgacgcc 1860
Query: 2050 gaatcagtcccgttgcccgacgacacattcgacgcgctggtgtgcgagtgcgcgttctgc 2109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 gaatcagtcccgttgcccgacgacacattcgacgcgctggtgtgcgagtgcgcgttctgc 1920
Query: 2110 acattcccggacaagaacgccgccgcccagcagttcgctcggattctgcgtcctggtggc 2169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 acattcccggacaagaacgccgccgcccagcagttcgctcggattctgcgtcctggtggc 1980
Query: 2170 ctggccggcatcaccgatgtcactgtcggggacggcggcctgccggcggagctgacccca 2229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1981 ctggccggcatcaccgatgtcactgtcggggacggcggcctgccggcggagctgacccca 2040
Query: 2230 ttggccgcgtgggtcgcctgcatcgccgacgcccgaaccgtcaccgactacaccgacatc 2289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2041 ttggccgcgtgggtcgcctgcatcgccgacgcccgaaccgtcaccgactacaccgacatc 2100
Query: 2290 ctcgaaggggccggattgcgcacccgccacatcgagtctcatgacgagagcctgctggac 2349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2101 ctcgaaggggccggattgcgcacccgccacatcgagtctcatgacgagagcctgctggac 2160
Query: 2350 atgatcgaccgcatcgacgcgcggatcaccgccttgcacgtcgccgcaccggagatcctc 2409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2161 atgatcgaccgcatcgacgcgcggatcaccgccttgcacgtcgccgcaccggagatcctc 2220
Query: 2410 gccgacaacggcattcgccacgactcggtgcgcgatttcacagcgctcgcacgcgccgcg 2469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2221 gccgacaacggcattcgccacgactcggtgcgcgatttcacagcgctcgcacgcgccgcg 2280
Query: 2470 gtacaaaccggacgaatcggatacacgttgatgatcgcggaaaagccgtga 2520
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2281 gtacaaaccggacgaatcggatacacgttgatgatcgcggaaaagccgtga 2331
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00026 15513 15403 len=111
(111 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218248.1 [gene=ligC] [protein=ATP-depen... 220 2e-58
>lcl|NC_000962.2_cdsid_NP_218248.1 [gene=ligC]
[protein=ATP-dependent DNA ligase]
[protein_id=NP_218248.1] [location=4181758..4182834]
Length = 1077
Score = 220 bits (111), Expect = 2e-58
Identities = 111/111 (100%)
Strand = Plus / Minus
Query: 1 atgtcggtggttgccggggtgacgtggatcgacaggtcagcgtcggcccccgaaccagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 atgtcggtggttgccggggtgacgtggatcgacaggtcagcgtcggcccccgaaccagtt 429
Query: 61 acggcatcgaccagagcggctcgtctttcgctgaacggtcgcccggtgtag 111
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 acggcatcgaccagagcggctcgtctttcgctgaacggtcgcccggtgtag 378
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00027 15668 16102 len=435
(435 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218248.1 [gene=ligC] [protein=ATP-depen... 862 0.0
>lcl|NC_000962.2_cdsid_NP_218248.1 [gene=ligC] [protein=ATP-dependent
DNA ligase] [protein_id=NP_218248.1]
[location=4181758..4182834]
Length = 1077
Score = 862 bits (435), Expect = 0.0
Identities = 435/435 (100%)
Strand = Plus / Plus
Query: 1 gtgcacaagtccggcagtgacgcgatcggctcactgctgctagggctttaccaggaggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 gtgcacaagtccggcagtgacgcgatcggctcactgctgctagggctttaccaggaggac 702
Query: 61 ggccaactcgcgtcggtcggcgtgatcggcgcgttccccatggccgaacgacgccggcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 ggccaactcgcgtcggtcggcgtgatcggcgcgttccccatggccgaacgacgccggcta 762
Query: 121 ttaaccgagctgcagccgctggtcaccagcttcgacgaccacccatggaactgggccgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 ttaaccgagctgcagccgctggtcaccagcttcgacgaccacccatggaactgggccgcc 822
Query: 181 cacgttgccggccagcgcaccccacgtaagaacgagttctcccgctggaatgtcggcaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 cacgttgccggccagcgcaccccacgtaagaacgagttctcccgctggaatgtcggcaaa 882
Query: 241 gacctgtcgttcgtgccgctgcgacccgagcgggtggtcgaggtccgctacgaccgcatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 gacctgtcgttcgtgccgctgcgacccgagcgggtggtcgaggtccgctacgaccgcatg 942
Query: 301 gaaggcgcgcggttccgccacaccgcacagttcaaccggtggcgccccgaccgcgaccca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943 gaaggcgcgcggttccgccacaccgcacagttcaaccggtggcgccccgaccgcgaccca 1002
Query: 361 cgctcatgcagctatgcccagctcgaacgcccgctcaccgtcagcctctccgacattgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1003 cgctcatgcagctatgcccagctcgaacgcccgctcaccgtcagcctctccgacattgtg 1062
Query: 421 ccgggcctacgctaa 435
|||||||||||||||
Sbjct: 1063 ccgggcctacgctaa 1077
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00031 17408 17280 len=129
(129 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218250.1 [gene=Rv3733c] [protein=hypoth... 256 3e-69
>lcl|NC_000962.2_cdsid_NP_218250.1 [gene=Rv3733c]
[protein=hypothetical protein] [protein_id=NP_218250.1]
[location=complement(4184012..4184512)]
Length = 501
Score = 256 bits (129), Expect = 3e-69
Identities = 129/129 (100%)
Strand = Plus / Plus
Query: 1 gtgagctggtttccggtagcgcgggcacgcaccaaactgctcaaggggcagcggggtttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gtgagctggtttccggtagcgcgggcacgcaccaaactgctcaaggggcagcggggtttt 432
Query: 61 ctcgaccggttgatggcgcacccggccgtggcgggtttgtctgaaggaccagaatccctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ctcgaccggttgatggcgcacccggccgtggcgggtttgtctgaaggaccagaatccctg 492
Query: 121 cctcgctga 129
|||||||||
Sbjct: 493 cctcgctga 501
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00033 19341 17794 len=1548
(1548 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218251.1 [gene=Rv3734c] [protein=hypoth... 2706 0.0
lcl|NC_000962.2_cdsid_NP_218257.1 [gene=Rv3740c] [protein=hypoth... 60 5e-09
>lcl|NC_000962.2_cdsid_NP_218251.1 [gene=Rv3734c]
[protein=hypothetical protein] [protein_id=NP_218251.1]
[location=complement(4184526..4185890)]
Length = 1365
Score = 2706 bits (1365), Expect = 0.0
Identities = 1365/1365 (100%)
Strand = Plus / Plus
Query: 184 atggatctgatgatgcccaacgactcgatgtttcttttcattgaatctcgtgaacacccc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggatctgatgatgcccaacgactcgatgtttcttttcattgaatctcgtgaacacccc 60
Query: 244 atgcatgtgggtggcttgtcgttgttcgagccaccgcagggagctggtcctgagttcgtc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgcatgtgggtggcttgtcgttgttcgagccaccgcagggagctggtcctgagttcgtc 120
Query: 304 cgtgagttcaccgagcgtttggttgccaacgacgaattccagcccatgttccgaaagcac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgtgagttcaccgagcgtttggttgccaacgacgaattccagcccatgttccgaaagcac 180
Query: 364 cctgcgacgatcgggggtggaatcgcccgtgtggcatgggcttatgacgacgacatcgac 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cctgcgacgatcgggggtggaatcgcccgtgtggcatgggcttatgacgacgacatcgac 240
Query: 424 atcgattaccacgttcgccgctcggcgctgccctcgccaggacgagtccgcgatctgctc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atcgattaccacgttcgccgctcggcgctgccctcgccaggacgagtccgcgatctgctc 300
Query: 484 gagctgacctcaaggctgcataccagcctgctcgatcgccaccgcccgctgtgggagctg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gagctgacctcaaggctgcataccagcctgctcgatcgccaccgcccgctgtgggagctg 360
Query: 544 cacgtggtggaggggctgaacgacggccggtttgctatgtacaccaaaatgcaccacgcc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cacgtggtggaggggctgaacgacggccggtttgctatgtacaccaaaatgcaccacgcc 420
Query: 604 ctgatcgacggtgtttcggcgatgaagctggcgcagcgcacgctgtcggctgacccggac 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctgatcgacggtgtttcggcgatgaagctggcgcagcgcacgctgtcggctgacccggac 480
Query: 664 gacgccgaggtgcgcgccatctggaacctgcctccgcgcccacgtacgcgcccgccatcg 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gacgccgaggtgcgcgccatctggaacctgcctccgcgcccacgtacgcgcccgccatcg 540
Query: 724 gacggctcgtcactgttggatgcgctgttcaagatggcgggatccgttgtcggacttgca 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gacggctcgtcactgttggatgcgctgttcaagatggcgggatccgttgtcggacttgca 600
Query: 784 ccgtcgacgctgaagctggctcgtgcggcgctactcgagcagcagttgacgctgccgttc 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ccgtcgacgctgaagctggctcgtgcggcgctactcgagcagcagttgacgctgccgttc 660
Query: 844 gcggcgccacacagcatgttcaacgtcaaggtcgggggagcccgccggtgcgctgcgcag 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gcggcgccacacagcatgttcaacgtcaaggtcgggggagcccgccggtgcgctgcgcag 720
Query: 904 tcctggtcgctggaccggatcaagagcgtcaagcaggccgccggtgtgaccgtcaacgac 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tcctggtcgctggaccggatcaagagcgtcaagcaggccgccggtgtgaccgtcaacgac 780
Query: 964 gccgtcctggcgatgtgtgccggtgcgttgcgctactacctgatagagcggaatgcgctg 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gccgtcctggcgatgtgtgccggtgcgttgcgctactacctgatagagcggaatgcgctg 840
Query: 1024 ccggacagaccgctgatcgcgatggttccggtgagcctacgctccaaagaggacgctgac 1083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ccggacagaccgctgatcgcgatggttccggtgagcctacgctccaaagaggacgctgac 900
Query: 1084 gccggcggcaacttggtcggcagcgtcctgtgcaatctcgccacccatgtcgacgaccca 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gccggcggcaacttggtcggcagcgtcctgtgcaatctcgccacccatgtcgacgaccca 960
Query: 1144 gcgcaacggattcagaccatcagcgcgtccatggacggcaacaagaaagtgctctccgaa 1203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gcgcaacggattcagaccatcagcgcgtccatggacggcaacaagaaagtgctctccgaa 1020
Query: 1204 ttgccgcagctgcaggtgcttgcattgtcggcattgaatatggcgccgctgacgttggcg 1263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 ttgccgcagctgcaggtgcttgcattgtcggcattgaatatggcgccgctgacgttggcg 1080
Query: 1264 ggtgtaccgggtttcttgtcggcagtgccgccaccgttcaacatcgtcatctcgaatgtg 1323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ggtgtaccgggtttcttgtcggcagtgccgccaccgttcaacatcgtcatctcgaatgtg 1140
Query: 1324 ccggggccggtagacccgctctactacggcacggcccggcttgacggtagttacccattg 1383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 ccggggccggtagacccgctctactacggcacggcccggcttgacggtagttacccattg 1200
Query: 1384 tcgaacatcccggacggtcaagcgttgaacatcaccctggtgaacaatgctgggaatctc 1443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 tcgaacatcccggacggtcaagcgttgaacatcaccctggtgaacaatgctgggaatctc 1260
Query: 1444 gacttcggactggtcgggtgccgtcgcagtgtgccccacttgcagcggctgcttgcgcac 1503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 gacttcggactggtcgggtgccgtcgcagtgtgccccacttgcagcggctgcttgcgcac 1320
Query: 1504 ctggaatcgtcgctgaaggatctggaacaggccgtcgggatctaa 1548
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 ctggaatcgtcgctgaaggatctggaacaggccgtcgggatctaa 1365
>lcl|NC_000962.2_cdsid_NP_218257.1 [gene=Rv3740c]
[protein=hypothetical protein] [protein_id=NP_218257.1]
[location=complement(4190833..4192179)]
Length = 1347
Score = 60.0 bits (30), Expect = 5e-09
Identities = 84/102 (82%)
Strand = Plus / Plus
Query: 826 cagttgacgctgccgttcgcggcgccacacagcatgttcaacgtcaaggtcgggggagcc 885
|||||||| ||||| |||| ||| || |||| |||| |||| ||| |||||||||||
Sbjct: 628 cagttgacactgcccttcggggccccgcacaccatgctcaatgtcgccgtcgggggagcg 687
Query: 886 cgccggtgcgctgcgcagtcctggtcgctggaccggatcaag 927
|| || ||||| |||||||||||| || |||||||| |||||
Sbjct: 688 cggcgctgcgccgcgcagtcctggccgttggaccgggtcaag 729
Score = 56.0 bits (28), Expect = 8e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1018 gcgctgccggacagaccgctgatcgcgatggttccggtgagcct 1061
||||||||||||| |||||| | ||||||||||||||||||||
Sbjct: 820 gcgctgccggacacgccgctggttgcgatggttccggtgagcct 863
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00041 20967 22556 len=1590
(1590 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218254.1 [gene=Rv3737] [protein=hypothe... 3152 0.0
>lcl|NC_000962.2_cdsid_NP_218254.1 [gene=Rv3737] [protein=hypothetical
protein] [protein_id=NP_218254.1]
[location=4187699..4189288]
Length = 1590
Score = 3152 bits (1590), Expect = 0.0
Identities = 1590/1590 (100%)
Strand = Plus / Plus
Query: 1 atggatcaagatcgatcggacaacacggcattgcgccgtggtctgcgaattgccctgcgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggatcaagatcgatcggacaacacggcattgcgccgtggtctgcgaattgccctgcgc 60
Query: 61 gggcgccgcgatccgctgcccgtggcgggccggcggagccggacctccggcggaatcgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gggcgccgcgatccgctgcccgtggcgggccggcggagccggacctccggcggaatcgat 120
Query: 121 gacctgcacacccggaaggtgcttgacctgaccatccggctcgccgaggtgatgttgtcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gacctgcacacccggaaggtgcttgacctgaccatccggctcgccgaggtgatgttgtcg 180
Query: 181 tccggctctggcaccgcggatgtcgtcgccacagcccaggacgtggctcaggcctaccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tccggctctggcaccgcggatgtcgtcgccacagcccaggacgtggctcaggcctaccag 240
Query: 241 ctcaccgattgcgttgtcgacatcaccgttaccaccatcatcgtgtccgcgctagcgacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctcaccgattgcgttgtcgacatcaccgttaccaccatcatcgtgtccgcgctagcgacc 300
Query: 301 acagacactccgccggtcaccatcatgcggtcggtccggacccggtccactgactacagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acagacactccgccggtcaccatcatgcggtcggtccggacccggtccactgactacagc 360
Query: 361 cggctggccgaactcgatcgactcgttcagcggataacctccggtggcgtcgcagtcgac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cggctggccgaactcgatcgactcgttcagcggataacctccggtggcgtcgcagtcgac 420
Query: 421 caggctcacgaggctatggacgagttgaccgaacggccccacccctacccgcgctggctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caggctcacgaggctatggacgagttgaccgaacggccccacccctacccgcgctggctc 480
Query: 481 gcgaccgcgggggcggcgggcttcgcactcggcgtcgccatgttgctcggcggaacctgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gcgaccgcgggggcggcgggcttcgcactcggcgtcgccatgttgctcggcggaacctgg 540
Query: 541 ctgacctgcgtcttggctgccgtgacgtctggcgtgatcgaccgactgggccggctgctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctgacctgcgtcttggctgccgtgacgtctggcgtgatcgaccgactgggccggctgctg 600
Query: 601 aaccggatcgggaccccgttgttcttccagcgcgtgttcggcgcggggatcgcgaccctg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaccggatcgggaccccgttgttcttccagcgcgtgttcggcgcggggatcgcgaccctg 660
Query: 661 gtcgcggtggcggcttacctgatcgccggccaggatccgaccgcgctggtggccaccgga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gtcgcggtggcggcttacctgatcgccggccaggatccgaccgcgctggtggccaccgga 720
Query: 721 atcgttgtgctgctgtctgggatgaccttggtgggttcgatgcaggacgcggtcaccggg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 atcgttgtgctgctgtctgggatgaccttggtgggttcgatgcaggacgcggtcaccggg 780
Query: 781 tacatgctcaccgcactcgcccggcttggcgacgccctgttcctgaccgcagggatcgtc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacatgctcaccgcactcgcccggcttggcgacgccctgttcctgaccgcagggatcgtc 840
Query: 841 gtcggcatcctcatctcgttgcggggcgtcaccaatgccggcatccagatcgaactgcat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gtcggcatcctcatctcgttgcggggcgtcaccaatgccggcatccagatcgaactgcat 900
Query: 901 gtcgacgcaaccacgacgctcgccaccccgggcatgccgctaccgattctcgtcgcggta 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gtcgacgcaaccacgacgctcgccaccccgggcatgccgctaccgattctcgtcgcggta 960
Query: 961 agcggtgcggcgctgtccggcgtgtgcctgacgatcgcgagctatgcgccgctacgttct 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 agcggtgcggcgctgtccggcgtgtgcctgacgatcgcgagctatgcgccgctacgttct 1020
Query: 1021 gtggccaccgccggactctcggccggactcgccgaactggtgctcatcggactcggcgcg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gtggccaccgccggactctcggccggactcgccgaactggtgctcatcggactcggcgcg 1080
Query: 1081 gccgggttcggccgagtggtcgccacctggaccgccgcgatcggcgtcggcttcttggcc 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gccgggttcggccgagtggtcgccacctggaccgccgcgatcggcgtcggcttcttggcc 1140
Query: 1141 accctgatctcaatccgtcggcaggctcccgccttggtgacggccaccgccggcatcatg 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 accctgatctcaatccgtcggcaggctcccgccttggtgacggccaccgccggcatcatg 1200
Query: 1201 ccgatgctgccgggccttgcggtcttccgtgccgtgttcgcgttcgccgtcaatgacaca 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ccgatgctgccgggccttgcggtcttccgtgccgtgttcgcgttcgccgtcaatgacaca 1260
Query: 1261 cccgacggcggtctgacccagctgctggaagcggccgcgactgcactcgcgcttggcagc 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 cccgacggcggtctgacccagctgctggaagcggccgcgactgcactcgcgcttggcagc 1320
Query: 1321 ggggtggtgttgggcgagttcctcgcctcaccattgcggtacggcgccggccggatcggc 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 ggggtggtgttgggcgagttcctcgcctcaccattgcggtacggcgccggccggatcggc 1380
Query: 1381 gacctctttcggatcgagggtccacccgggctccggcgggcggtcggccgtgtggtgcgc 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 gacctctttcggatcgagggtccacccgggctccggcgggcggtcggccgtgtggtgcgc 1440
Query: 1441 ctacagccggccaagagccagcagccgaccggcaccggtggccaacggtggcgaagcgtc 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 ctacagccggccaagagccagcagccgaccggcaccggtggccaacggtggcgaagcgtc 1500
Query: 1501 gcgctggagccgacgacggccgacgacgtggacgccggctatcgcggcgattggcccgct 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 gcgctggagccgacgacggccgacgacgtggacgccggctatcgcggcgattggcccgct 1560
Query: 1561 acctgcaccagcgcgaccgaggtgcgctag 1590
||||||||||||||||||||||||||||||
Sbjct: 1561 acctgcaccagcgcgaccgaggtgcgctag 1590
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00049 26047 24101 len=1947
(1947 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218257.1 [gene=Rv3740c] [protein=hypoth... 2670 0.0
lcl|NC_000962.2_cdsid_NP_218258.1 [gene=Rv3741c] [protein=oxidor... 1191 0.0
lcl|NC_000962.2_cdsid_NP_218251.1 [gene=Rv3734c] [protein=hypoth... 60 7e-09
>lcl|NC_000962.2_cdsid_NP_218257.1 [gene=Rv3740c]
[protein=hypothetical protein] [protein_id=NP_218257.1]
[location=complement(4190833..4192179)]
Length = 1347
Score = 2670 bits (1347), Expect = 0.0
Identities = 1347/1347 (100%)
Strand = Plus / Plus
Query: 601 atgtcaccgatcgatgcgctgttcttatcagccgagtcgcgagagcatccgctgcatgtc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgtcaccgatcgatgcgctgttcttatcagccgagtcgcgagagcatccgctgcatgtc 60
Query: 661 ggcgcgctgcaactgttcgagccacccgcgggggcgggacgtgggtttgtgcgggaaacc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggcgcgctgcaactgttcgagccacccgcgggggcgggacgtgggtttgtgcgggaaacc 120
Query: 721 tatcaggcgatgcttcagtgccgcgagatagcaccgctatttcgcaagcgccccacgtcg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tatcaggcgatgcttcagtgccgcgagatagcaccgctatttcgcaagcgccccacgtcg 180
Query: 781 cttcacggtgcactcatcaacctcggctggtcgaccgacgctgacgtcgacctcggctac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cttcacggtgcactcatcaacctcggctggtcgaccgacgctgacgtcgacctcggctac 240
Query: 841 cacgcgcggcggtctgccctgccggcgccgggccgggtgcgtgagctgctggaactgacg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cacgcgcggcggtctgccctgccggcgccgggccgggtgcgtgagctgctggaactgacg 300
Query: 901 tcacggttacactccaatctgctcgaccggcaccgcccgctctgggaaacacacgtgatc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcacggttacactccaatctgctcgaccggcaccgcccgctctgggaaacacacgtgatc 360
Query: 961 gagggcctccgggatggacgctttgcgatctattcgaagatgcaccacgccctggtcgac 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gagggcctccgggatggacgctttgcgatctattcgaagatgcaccacgccctggtcgac 420
Query: 1021 ggggtgtccggacttacgctgatgcgccagccgatgaccaccgaccccatcgagggcaag 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggggtgtccggacttacgctgatgcgccagccgatgaccaccgaccccatcgagggcaag 480
Query: 1081 ttgcgcaccgcctggtcaccggcgacgcagcacaccgccatcaagcgacggcgcggccgc 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttgcgcaccgcctggtcaccggcgacgcagcacaccgccatcaagcgacggcgcggccgc 540
Query: 1141 ctgcaacagctggggggcatgctgggatcggttgccgggctcgctccctcaacgttgcga 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctgcaacagctggggggcatgctgggatcggttgccgggctcgctccctcaacgttgcga 600
Query: 1201 ctggcgcgttccgcgttgatcgaacaacagttgacactgcccttcggggccccgcacacc 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctggcgcgttccgcgttgatcgaacaacagttgacactgcccttcggggccccgcacacc 660
Query: 1261 atgctcaatgtcgccgtcgggggagcgcggcgctgcgccgcgcagtcctggccgttggac 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atgctcaatgtcgccgtcgggggagcgcggcgctgcgccgcgcagtcctggccgttggac 720
Query: 1321 cgggtcaaggcggtgaaagacgcggccggggtcagcctcaacgacgtggtgctggcgatg 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cgggtcaaggcggtgaaagacgcggccggggtcagcctcaacgacgtggtgctggcgatg 780
Query: 1381 tgcgccggcgcacttcgcgaatatctggacgacaacgacgcgctgccggacacgccgctg 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tgcgccggcgcacttcgcgaatatctggacgacaacgacgcgctgccggacacgccgctg 840
Query: 1441 gttgcgatggttccggtgagcctgcgcaccgaccgcgactcggtcggcggcaacatggtc 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gttgcgatggttccggtgagcctgcgcaccgaccgcgactcggtcggcggcaacatggtc 900
Query: 1501 ggggcggtgttgtgtaatctggccacccaccttgatgatccagccgaccggctgaacgcc 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ggggcggtgttgtgtaatctggccacccaccttgatgatccagccgaccggctgaacgcc 960
Query: 1561 atccacgcttcgatgcgcggtaataagaacgtactatcgcagctgccccgcgcccaggcg 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 atccacgcttcgatgcgcggtaataagaacgtactatcgcagctgccccgcgcccaggcg 1020
Query: 1621 ttggcggtgtcactgctgctgttgagcccagctgcgctgaacaccctgccgggcttggcc 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 ttggcggtgtcactgctgctgttgagcccagctgcgctgaacaccctgccgggcttggcc 1080
Query: 1681 aaggcaacgccaccgccgtttaatgtgtgcatctcgaacgtgcccggtgcgcgcgaaccg 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 aaggcaacgccaccgccgtttaatgtgtgcatctcgaacgtgcccggtgcgcgcgaaccg 1140
Query: 1741 ctgtacttcaacggcgccaggatggtcggcaactatccaatgtcgttggtgctcgacgga 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 ctgtacttcaacggcgccaggatggtcggcaactatccaatgtcgttggtgctcgacgga 1200
Query: 1801 caagcgctcaacatcaccctgaccagcaccgccgatagtctcgacttcggagtcgtgggt 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 caagcgctcaacatcaccctgaccagcaccgccgatagtctcgacttcggagtcgtgggt 1260
Query: 1861 tgccgccgcagcgttccacacgtgcagcgggtactcagccatctggagacctcgttgaag 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 tgccgccgcagcgttccacacgtgcagcgggtactcagccatctggagacctcgttgaag 1320
Query: 1921 gaactggagcgcgcggtcgggctatga 1947
|||||||||||||||||||||||||||
Sbjct: 1321 gaactggagcgcgcggtcgggctatga 1347
>lcl|NC_000962.2_cdsid_NP_218258.1 [gene=Rv3741c]
[protein=oxidoreductase] [protein_id=NP_218258.1]
[location=complement(4192179..4192853)]
Length = 675
Score = 1191 bits (601), Expect = 0.0
Identities = 601/601 (100%)
Strand = Plus / Plus
Query: 1 atgccaacggtatccgagagccgcccggcgactgatccgtcatctcaacgccaagcagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 atgccaacggtatccgagagccgcccggcgactgatccgtcatctcaacgccaagcagct 134
Query: 61 ggccgccggatatccggccgacgagcacttcaagccggtctacaacccatgggaccaacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 ggccgccggatatccggccgacgagcacttcaagccggtctacaacccatgggaccaacg 194
Query: 121 cctgtgcgcggtgccagatgccgacatgttcaaggccatccgcgacggccgggcctcggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 cctgtgcgcggtgccagatgccgacatgttcaaggccatccgcgacggccgggcctcggt 254
Query: 181 ggtcaccgaggcgatcgatacttttaccgaaaacggaatccggctgcaatccggacgcga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ggtcaccgaggcgatcgatacttttaccgaaaacggaatccggctgcaatccggacgcga 314
Query: 241 attggcggccgacatcagcatcactgccaccggcctcaatctgctggccttcggtggcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 attggcggccgacatcagcatcactgccaccggcctcaatctgctggccttcggtggcat 374
Query: 301 caacctctcggtcgacggagtcgccgtggacgttgccgagaaggtggcattcaagggttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 caacctctcggtcgacggagtcgccgtggacgttgccgagaaggtggcattcaagggttt 434
Query: 361 cctgctcagcgacgtgtccaacttcgccggcccacatggacgcacccgggcacaccatct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 cctgctcagcgacgtgtccaacttcgccggcccacatggacgcacccgggcacaccatct 494
Query: 421 gctgtccgcagctgcccgcagccatgccgacccggccgctgcagggcgccgaagccccct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gctgtccgcagctgcccgcagccatgccgacccggccgctgcagggcgccgaagccccct 554
Query: 481 ggcggacctcaaggtgttgcgcgagggcccggtcgacgacgatcacctgcgctttacgac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ggcggacctcaaggtgttgcgcgagggcccggtcgacgacgatcacctgcgctttacgac 614
Query: 541 gtcggcttcggcgagccggctgacggtgaagcgcatcaccaggagcacgccatggaactg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gtcggcttcggcgagccggctgacggtgaagcgcatcaccaggagcacgccatggaactg 674
Query: 601 a 601
|
Sbjct: 675 a 675
>lcl|NC_000962.2_cdsid_NP_218251.1 [gene=Rv3734c]
[protein=hypothetical protein] [protein_id=NP_218251.1]
[location=complement(4184526..4185890)]
Length = 1365
Score = 60.0 bits (30), Expect = 7e-09
Identities = 84/102 (82%)
Strand = Plus / Plus
Query: 1228 cagttgacactgcccttcggggccccgcacaccatgctcaatgtcgccgtcgggggagcg 1287
|||||||| ||||| |||| ||| || |||| |||| |||| ||| |||||||||||
Sbjct: 643 cagttgacgctgccgttcgcggcgccacacagcatgttcaacgtcaaggtcgggggagcc 702
Query: 1288 cggcgctgcgccgcgcagtcctggccgttggaccgggtcaag 1329
|| || ||||| |||||||||||| || |||||||| |||||
Sbjct: 703 cgccggtgcgctgcgcagtcctggtcgctggaccggatcaag 744
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1420 gcgctgccggacacgccgctggttgcgatggttccggtgagcct 1463
||||||||||||| |||||| | ||||||||||||||||||||
Sbjct: 835 gcgctgccggacagaccgctgatcgcgatggttccggtgagcct 878
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00052 26282 26118 len=165
(165 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218259.1 [gene=Rv3742c] [protein=oxidor... 327 1e-90
lcl|NC_000962.2_cdsid_NP_217599.1 [gene=Rv3083] [protein=monooxy... 46 8e-06
>lcl|NC_000962.2_cdsid_NP_218259.1 [gene=Rv3742c]
[protein=oxidoreductase] [protein_id=NP_218259.1]
[location=complement(4192850..4193245)]
Length = 396
Score = 327 bits (165), Expect = 1e-90
Identities = 165/165 (100%)
Strand = Plus / Plus
Query: 1 atggtccaccgaggacgctcgctggctggtggagatcgaacgcttcgacaccggcgaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 atggtccaccgaggacgctcgctggctggtggagatcgaacgcttcgacaccggcgaaca 291
Query: 61 cgtcaccatgagctgcggatggtgatcatcggcagcggcgcgaccgcggtcacgctggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 cgtcaccatgagctgcggatggtgatcatcggcagcggcgcgaccgcggtcacgctggtg 351
Query: 121 ccggccatggcccagaccgccggcgcggtaaccatgcccaaatga 165
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ccggccatggcccagaccgccggcgcggtaaccatgcccaaatga 396
>lcl|NC_000962.2_cdsid_NP_217599.1 [gene=Rv3083]
[protein=monooxygenase] [protein_id=NP_217599.1]
[location=3448504..3449991]
Length = 1488
Score = 46.1 bits (23), Expect = 8e-06
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 86 tcatcggcagcggcgcgaccgcggtcacgctggtgccggccatggcc 132
|||||||||||||||| || |||||||| |||| ||||| ||||||
Sbjct: 545 tcatcggcagcggcgcaacggcggtcactttggttccggcgatggcc 591
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00057 28641 26659 len=1983
(1983 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218260.1 [gene=ctpJ] [protein=cation tr... 3931 0.0
lcl|NC_000962.2_cdsid_NP_215985.1 [gene=ctpD] [protein=ATPase P]... 84 5e-16
lcl|NC_000962.2_cdsid_NP_215484.2 [gene=ctpV] [protein=metal cat... 50 7e-06
>lcl|NC_000962.2_cdsid_NP_218260.1 [gene=ctpJ] [protein=cation
transporter P-type ATPase CtpJ] [protein_id=NP_218260.1]
[location=complement(4193391..4195373)]
Length = 1983
Score = 3931 bits (1983), Expect = 0.0
Identities = 1983/1983 (100%)
Strand = Plus / Plus
Query: 1 gtggctgttcgtgaactctctcccgcccggtgcacctcagcgtcgccgttggtcctagcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggctgttcgtgaactctctcccgcccggtgcacctcagcgtcgccgttggtcctagcg 60
Query: 61 cgccgaaccaagctgttcgcgttgtcggagatgcgttgggccgcgctggcgttgggcctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgccgaaccaagctgttcgcgttgtcggagatgcgttgggccgcgctggcgttgggcctg 120
Query: 121 ttttcagcgggactactgacacagctgtgcggagcaccgcaatgggtgcggtgggcgctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttttcagcgggactactgacacagctgtgcggagcaccgcaatgggtgcggtgggcgctg 180
Query: 181 tttctggcgtgctacgcgaccggcggttgggagccagggctggccgggctacaggcgcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttctggcgtgctacgcgaccggcggttgggagccagggctggccgggctacaggcgcta 240
Query: 241 cagcgaaggaccctagatgtcgatctgctgatggtggtcgcggcgatcggcgcggccgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cagcgaaggaccctagatgtcgatctgctgatggtggtcgcggcgatcggcgcggccgcc 300
Query: 301 atcgggcagatcgccgagggcgctctgctcattgtcatcttcgcaacctccggtgctctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atcgggcagatcgccgagggcgctctgctcattgtcatcttcgcaacctccggtgctctg 360
Query: 361 gaagcactggtaacggcccgcaccgcggactcggtgcgtgggctaatgggcctcgcgccg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaagcactggtaacggcccgcaccgcggactcggtgcgtgggctaatgggcctcgcgccg 420
Query: 421 ggcaccgcgacccgcgtgggcgccggcggtggtgaggaaacggtcaacgccgccgaccta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggcaccgcgacccgcgtgggcgccggcggtggtgaggaaacggtcaacgccgccgaccta 480
Query: 481 aggattggggacatcgtgctggtacggcccggtgagcgcatctcggcggacgcaaccgtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aggattggggacatcgtgctggtacggcccggtgagcgcatctcggcggacgcaaccgtg 540
Query: 541 cttgccggcggcagcgaagtcgatcaggccaccgtcaccggagagccgctgcccgtcgac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cttgccggcggcagcgaagtcgatcaggccaccgtcaccggagagccgctgcccgtcgac 600
Query: 601 aagtcaatcggcgatcaggtgttcgccggcactgtcaacggcaccggcgccctgcggatc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aagtcaatcggcgatcaggtgttcgccggcactgtcaacggcaccggcgccctgcggatc 660
Query: 661 cgggtcgaccggctcgcgcgggattccgtcgtcgctcgcattgccaccctggttgaacag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggtcgaccggctcgcgcgggattccgtcgtcgctcgcattgccaccctggttgaacag 720
Query: 721 gccagccagaccaaggcgcgcacccagctgttcatcgagaaagtcgaacaacgctactcg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gccagccagaccaaggcgcgcacccagctgttcatcgagaaagtcgaacaacgctactcg 780
Query: 781 atcggcatggtcgccgtgaccctcgccgtattcgcggtgcccccgctatggggggagacc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 atcggcatggtcgccgtgaccctcgccgtattcgcggtgcccccgctatggggggagacc 840
Query: 841 ctgcagcgggcgttgctgcgagccatgacgttcatgatcgtcgcgtcgccgtgtgcggtc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ctgcagcgggcgttgctgcgagccatgacgttcatgatcgtcgcgtcgccgtgtgcggtc 900
Query: 901 gtgctggccaccatgccgccactattggccgcaatcgccaacgccggccgccacggggtg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gtgctggccaccatgccgccactattggccgcaatcgccaacgccggccgccacggggtg 960
Query: 961 ctcgccaagtccgcgatcgtgatggaacaacttggaaccaccacacggatcgcgttcgac 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ctcgccaagtccgcgatcgtgatggaacaacttggaaccaccacacggatcgcgttcgac 1020
Query: 1021 aagaccggcacccttacccgcggtacccccgaactcgccggcatctgggtgtacgaacga 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 aagaccggcacccttacccgcggtacccccgaactcgccggcatctgggtgtacgaacga 1080
Query: 1081 cgattcaccgatgatgaactgctgcggcttgcggctgcagcggagtatcccagtgagcac 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 cgattcaccgatgatgaactgctgcggcttgcggctgcagcggagtatcccagtgagcac 1140
Query: 1141 ccactgggtgcggccatcgtgaaagccgcccagtctcgccgcatccggctgccgaccgtc 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 ccactgggtgcggccatcgtgaaagccgcccagtctcgccgcatccggctgccgaccgtc 1200
Query: 1201 ggcgagttcaccgcacacccaggttgccgtgtcaccgcccgcgtcgatggccacgtcatt 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ggcgagttcaccgcacacccaggttgccgtgtcaccgcccgcgtcgatggccacgtcatt 1260
Query: 1261 gcggtcggatcggcgacggcactgctgggcactgccggcgccgccgcgctcgaagcttcc 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 gcggtcggatcggcgacggcactgctgggcactgccggcgccgccgcgctcgaagcttcc 1320
Query: 1321 atgatcacggcggtcgactttctgcaaggcgagggctacaccgtcgtcgtcgtggtatgc 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 atgatcacggcggtcgactttctgcaaggcgagggctacaccgtcgtcgtcgtggtatgc 1380
Query: 1381 gatagccatcccgtcgggctactcgccatcaccgatcagcttcgccccgaagccgccgcg 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 gatagccatcccgtcgggctactcgccatcaccgatcagcttcgccccgaagccgccgcg 1440
Query: 1441 gcgatttccgctgcgaccaaactgaccggggccaaaccggtattgcttaccggcgacaac 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 gcgatttccgctgcgaccaaactgaccggggccaaaccggtattgcttaccggcgacaac 1500
Query: 1501 cgggccaccgccgatcggctcggtgtacaggttggcatcgacgacgtacgggccgggcta 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 cgggccaccgccgatcggctcggtgtacaggttggcatcgacgacgtacgggccgggcta 1560
Query: 1561 ctgcccgacgacaaggtcgcagccgtgcggcagctgcaagctggaggtgccagattgacc 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 ctgcccgacgacaaggtcgcagccgtgcggcagctgcaagctggaggtgccagattgacc 1620
Query: 1621 gtggtcggtgacggtatcaacgacgctccggccttagcggccgcgcatgtcggcatcgcc 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 gtggtcggtgacggtatcaacgacgctccggccttagcggccgcgcatgtcggcatcgcc 1680
Query: 1681 atgggcagcgcccgatcggaactcaccctgcagaccgccgacgccgtcgtcgtccgcgat 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 atgggcagcgcccgatcggaactcaccctgcagaccgccgacgccgtcgtcgtccgcgat 1740
Query: 1741 gacctgaccaccattcccaccgttatcgccatgtcgcggcgagcccgccgcatcgtggtc 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 gacctgaccaccattcccaccgttatcgccatgtcgcggcgagcccgccgcatcgtggtc 1800
Query: 1801 gccaacctcatcgtggccgtgacattcatcgccgggctcgttgtgtgggacctggccttc 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 gccaacctcatcgtggccgtgacattcatcgccgggctcgttgtgtgggacctggccttc 1860
Query: 1861 acgttgccattgccactgggcgtcgcccgacacgaaggttccaccatcatcgtcggactc 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 acgttgccattgccactgggcgtcgcccgacacgaaggttccaccatcatcgtcggactc 1920
Query: 1921 aatgggctgcgcctactgcgccacacggcctggcgccgcgccgctggcaccgcgcacagg 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 aatgggctgcgcctactgcgccacacggcctggcgccgcgccgctggcaccgcgcacagg 1980
Query: 1981 tga 1983
|||
Sbjct: 1981 tga 1983
>lcl|NC_000962.2_cdsid_NP_215985.1 [gene=ctpD] [protein=ATPase P]
[protein_id=NP_215985.1] [location=1656963..1658936]
Length = 1974
Score = 83.8 bits (42), Expect = 5e-16
Identities = 102/122 (83%)
Strand = Plus / Plus
Query: 854 tgctgcgagccatgacgttcatgatcgtcgcgtcgccgtgtgcggtcgtgctggccacca 913
||||||| |||||||| ||||||||||| || ||||| || ||||| |||||||||||||
Sbjct: 875 tgctgcgcgccatgaccttcatgatcgtggcatcgccatgcgcggtggtgctggccacca 934
Query: 914 tgccgccactattggccgcaatcgccaacgccggccgccacggggtgctcgccaagtccg 973
||||||| || | | || ||||||||||| ||||| || |||||||| | ||| ||||
Sbjct: 935 tgccgccgctgctttcggcgatcgccaacgcaggccgtcatggggtgctggtcaaatccg 994
Query: 974 cg 975
||
Sbjct: 995 cg 996
Score = 61.9 bits (31), Expect = 2e-09
Identities = 88/107 (82%)
Strand = Plus / Plus
Query: 256 gatgtcgatctgctgatggtggtcgcggcgatcggcgcggccgccatcgggcagatcgcc 315
||||| |||||||||||| | | ||||||| |||| |||| ||| || ||||||||| |
Sbjct: 277 gatgtggatctgctgatgattgccgcggcggtcggagcggtcgcgattgggcagatcttc 336
Query: 316 gagggcgctctgctcattgtcatcttcgcaacctccggtgctctgga 362
|| ||||| ||||| || || |||||||| || |||||||| |||||
Sbjct: 337 gacggcgcgctgctgatcgtgatcttcgccacgtccggtgcgctgga 383
Score = 50.1 bits (25), Expect = 7e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 742 acccagctgttcatcgagaaagtcgaacaacgctactcgatcggcatggtcgc 794
||||| |||||||| |||||| |||| ||||||||||| | |||||||||||
Sbjct: 763 acccaactgttcattgagaaaatcgagcaacgctactccctgggcatggtcgc 815
>lcl|NC_000962.2_cdsid_NP_215484.2 [gene=ctpV] [protein=metal cation
transporter P-type ATPase CtpV] [protein_id=NP_215484.2]
[location=1078677..1081055]
Length = 2379
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1014 gttcgacaagaccggcacccttacccgcg 1042
||||||||||||||||||||| |||||||
Sbjct: 1440 gttcgacaagaccggcaccctcacccgcg 1468
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00058 28912 29070 len=159
(159 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218261.1 [gene=Rv3744] [protein=ArsR fa... 315 5e-87
>lcl|NC_000962.2_cdsid_NP_218261.1 [gene=Rv3744] [protein=ArsR
family transcriptional regulator]
[protein_id=NP_218261.1] [location=4195440..4195802]
Length = 363
Score = 315 bits (159), Expect = 5e-87
Identities = 159/159 (100%)
Strand = Plus / Plus
Query: 1 gtgttgcggaatctcggcttggtcgtgggcgaccgggcaggccgtagcatcgtctacagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gtgttgcggaatctcggcttggtcgtgggcgaccgggcaggccgtagcatcgtctacagc 264
Query: 61 ctctacgacacgcatgtggcgcagcttcttgacgaagccatttaccacagcgagcacttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctctacgacacgcatgtggcgcagcttcttgacgaagccatttaccacagcgagcacttg 324
Query: 121 caccttggtctctccgaccggcaccccagcgcgggctaa 159
|||||||||||||||||||||||||||||||||||||||
Sbjct: 325 caccttggtctctccgaccggcaccccagcgcgggctaa 363
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00060 31459 31569 len=111
(111 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218267.1 [gene=Rv3750c] [protein=excisi... 192 4e-50
>lcl|NC_000962.2_cdsid_NP_218267.1 [gene=Rv3750c]
[protein=excisionase] [protein_id=NP_218267.1]
[location=complement(4198205..4198597)]
Length = 393
Score = 192 bits (97), Expect = 4e-50
Identities = 97/97 (100%)
Strand = Plus / Minus
Query: 15 ctacttcttttctgcaagcgccgcctggagctcaccaagggcgtcgcggctcaactcgcc 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ctacttcttttctgcaagcgccgcctggagctcaccaagggcgtcgcggctcaactcgcc 334
Query: 75 tagtgctgcacggcgattcgaccgggtttcttgctga 111
|||||||||||||||||||||||||||||||||||||
Sbjct: 333 tagtgctgcacggcgattcgaccgggtttcttgctga 297
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00064 35547 35855 len=309
(309 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218273.1 [gene=proZ] [protein=osmoprote... 613 e-176
>lcl|NC_000962.2_cdsid_NP_218273.1 [gene=proZ]
[protein=osmoprotectant (glycine
betaine/carnitine/choline/L-proline) transport integral
membrane protein ABC transporter PROZ]
[protein_id=NP_218273.1]
[location=complement(4201894..4202613)]
Length = 720
Score = 613 bits (309), Expect = e-176
Identities = 309/309 (100%)
Strand = Plus / Minus
Query: 1 atgccggcgtacgtgctggccagcaaagacgggatacccaacagcatcagcgccaccagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 atgccggcgtacgtgctggccagcaaagacgggatacccaacagcatcagcgccaccagc 276
Query: 61 ggcggccccaatcccagcccgaatagcagcacccctagcagcagaacacccaacgtgggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ggcggccccaatcccagcccgaatagcagcacccctagcagcagaacacccaacgtgggc 216
Query: 121 aaagcgcgcaaaccattgaccgcacccaccaccagcagcgtcccgcgaccggtgtgcccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 aaagcgcgcaaaccattgaccgcacccaccaccagcagcgtcccgcgaccggtgtgcccg 156
Query: 181 ataagcagcccgactggcacggcgatcagtgctgaagcggccaccgccaccgcggtgtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 ataagcagcccgactggcacggcgatcagtgctgaagcggccaccgccaccgcggtgtat 96
Query: 241 tccaggtgctcacacgtgcggactgccaagccgactggaccggtccagttactggcggtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 tccaggtgctcacacgtgcggactgccaagccgactggaccggtccagttactggcggtt 36
Query: 301 agcaggtag 309
|||||||||
Sbjct: 35 agcaggtag 27
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00065 36235 36375 len=141
(141 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218274.1 [gene=proW] [protein=osmoprote... 280 3e-76
>lcl|NC_000962.2_cdsid_NP_218274.1 [gene=proW]
[protein=osmoprotectant (glycine
betaine/carnitine/choline/L-proline) transport integral
membrane protein ABC transporter PROW]
[protein_id=NP_218274.1]
[location=complement(4202610..4203299)]
Length = 690
Score = 280 bits (141), Expect = 3e-76
Identities = 141/141 (100%)
Strand = Plus / Minus
Query: 1 atgcacctgcgccggcaccgcgtccagcgcttcgagcaccgcccgcaccagcagggccgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 atgcacctgcgccggcaccgcgtccagcgcttcgagcaccgcccgcaccagcagggccgt 274
Query: 61 ggtgtaggccgccaacgccacaatgacattggcctcgtcgaggatccgggttccgatgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ggtgtaggccgccaacgccacaatgacattggcctcgtcgaggatccgggttccgatgat 214
Query: 121 cagcggcaacaccacgaatag 141
|||||||||||||||||||||
Sbjct: 213 cagcggcaacaccacgaatag 193
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00066 36350 36562 len=213
(213 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218274.1 [gene=proW] [protein=osmoprote... 422 e-119
>lcl|NC_000962.2_cdsid_NP_218274.1 [gene=proW]
[protein=osmoprotectant (glycine
betaine/carnitine/choline/L-proline) transport integral
membrane protein ABC transporter PROW]
[protein_id=NP_218274.1]
[location=complement(4202610..4203299)]
Length = 690
Score = 422 bits (213), Expect = e-119
Identities = 213/213 (100%)
Strand = Plus / Minus
Query: 1 atgatcagcggcaacaccacgaatagcgctagcgacgggatggtgaatataacgctggcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 atgatcagcggcaacaccacgaatagcgctagcgacgggatggtgaatataacgctggcg 159
Query: 61 gtcgccgtcgtcagccggcgaagcagcggcgcgcgctgcaccagcaggcccaacggcacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 gtcgccgtcgtcagccggcgaagcagcggcgcgcgctgcaccagcaggcccaacggcacc 99
Query: 121 gcgctcatcagcccgatcagcaccggcagcaacgagaggcgcagatggacgacggtcagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 gcgctcatcagcccgatcagcaccggcagcaacgagaggcgcagatggacgacggtcagc 39
Query: 181 gcccaggccgctcccgggtgggtcatcaggtag 213
|||||||||||||||||||||||||||||||||
Sbjct: 38 gcccaggccgctcccgggtgggtcatcaggtag 6
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00069 37736 36555 len=1182
(1182 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218275.1 [gene=proV] [protein=osmoprote... 2242 0.0
lcl|NC_000962.2_cdsid_NP_218276.1 [gene=proX] [protein=betaine/g... 86 7e-17
lcl|NC_000962.2_cdsid_NP_215335.1 [gene=phoT] [protein=phosphate... 50 4e-06
>lcl|NC_000962.2_cdsid_NP_218275.1 [gene=proV] [protein=osmoprotectant
(glycine betaine/carnitine/choline/L-proline) transport
ATP-binding protein ABC transporter PROV]
[protein_id=NP_218275.1]
[location=complement(4203287..4204417)]
Length = 1131
Score = 2242 bits (1131), Expect = 0.0
Identities = 1131/1131 (100%)
Strand = Plus / Plus
Query: 52 ttgatctgctttgacgatgtcagcaaggtgtacgcacacggtgccaccgccgtagaccgg 111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgatctgctttgacgatgtcagcaaggtgtacgcacacggtgccaccgccgtagaccgg 60
Query: 112 ctgacgctggaagtccctaacggcatgctgaccgtcttcgtcggcccctccggctgcggc 171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgacgctggaagtccctaacggcatgctgaccgtcttcgtcggcccctccggctgcggc 120
Query: 172 aagacgacggcgctgcgaatgatcaaccgaatggtggatccgacctcgggcaccatcact 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagacgacggcgctgcgaatgatcaaccgaatggtggatccgacctcgggcaccatcact 180
Query: 232 gtcgacggtaccgacgtgtcgacggtcaatgcggtgaagctgcgcctgggaattggctat 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtcgacggtaccgacgtgtcgacggtcaatgcggtgaagctgcgcctgggaattggctat 240
Query: 292 gtcatccagaacgcggggctgatgcctcatcaacgggtcatcgacaacgtcgcaacggtg 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtcatccagaacgcggggctgatgcctcatcaacgggtcatcgacaacgtcgcaacggtg 300
Query: 352 ccggtgctgaagggtcagccgcgccgggcagcccgcaaagccggttatgaggtgcttgag 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggtgctgaagggtcagccgcgccgggcagcccgcaaagccggttatgaggtgcttgag 360
Query: 412 cgtgtcgggctggaccccaaggtcgccacccgctacccggcccagctctcgggcggcgaa 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgtgtcgggctggaccccaaggtcgccacccgctacccggcccagctctcgggcggcgaa 420
Query: 472 cagcaacgggtcggcgtggcacgggcactcgcggccgatccgccgatcttgttgatggac 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cagcaacgggtcggcgtggcacgggcactcgcggccgatccgccgatcttgttgatggac 480
Query: 532 gagccgttctcggccgtcgacccggtggttcgccacgagctacagaacgaaatacttcgt 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gagccgttctcggccgtcgacccggtggttcgccacgagctacagaacgaaatacttcgt 540
Query: 592 ctgcaagccgagttgcacaagaccattgtcttcgtgacgcacgacatcgacgaggcgttg 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctgcaagccgagttgcacaagaccattgtcttcgtgacgcacgacatcgacgaggcgttg 600
Query: 652 aagctcgccgatctggtggcggtgttcgccccgggcggcgcgcttgcgcagtacgacgaa 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aagctcgccgatctggtggcggtgttcgccccgggcggcgcgcttgcgcagtacgacgaa 660
Query: 712 actgcccggctgttatccagtccggcgaatgacttcgtgtcgaagttcatcggtctcggt 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 actgcccggctgttatccagtccggcgaatgacttcgtgtcgaagttcatcggtctcggt 720
Query: 772 cgcggctatcggtggctgcagctgttcgacgcggccggactacctgtgcgcgacatcgag 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cgcggctatcggtggctgcagctgttcgacgcggccggactacctgtgcgcgacatcgag 780
Query: 832 caagtctcggtgaacggcctttccgatgcccgggacaggcaagttcgtgacggctgggtg 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 caagtctcggtgaacggcctttccgatgcccgggacaggcaagttcgtgacggctgggtg 840
Query: 892 ctggtggtcgacggtgcgggtgcgccgttgggctggatcgacgccgatggccggcggcgt 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ctggtggtcgacggtgcgggtgcgccgttgggctggatcgacgccgatggccggcggcgt 900
Query: 952 caccgcggcggcgcggcattgtcggatgccatgaccgtcggcggttcggtgttccgcccg 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 caccgcggcggcgcggcattgtcggatgccatgaccgtcggcggttcggtgttccgcccg 960
Query: 1012 aacggtaacctcagccaggcgctggacgccgccttgtcctcgccgtcgggggtcggtgtc 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 aacggtaacctcagccaggcgctggacgccgccttgtcctcgccgtcgggggtcggtgtc 1020
Query: 1072 gccgttgacggcggtggcaaggtcatcggcgggatactggccgccgacgtgctggccgag 1131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gccgttgacggcggtggcaaggtcatcggcgggatactggccgccgacgtgctggccgag 1080
Query: 1132 ttccaaaaaggcaagaaggccggcggcggagctaagccatgcactacctga 1182
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ttccaaaaaggcaagaaggccggcggcggagctaagccatgcactacctga 1131
>lcl|NC_000962.2_cdsid_NP_218276.1 [gene=proX]
[protein=betaine/glycine ABC transporter
substrate-binding protein] [protein_id=NP_218276.1]
[location=complement(4204426..4205373)]
Length = 948
Score = 85.7 bits (43), Expect = 7e-17
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 1 atgggtgcgggacaacggtttcgatcatccagtgcggcagtag 43
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 906 atgggtgcgggacaacggtttcgatcatccagtgcggcagtag 948
>lcl|NC_000962.2_cdsid_NP_215335.1 [gene=phoT] [protein=phosphate
transporter ATP-binding protein]
[protein_id=NP_215335.1] [location=912726..913502]
Length = 777
Score = 50.1 bits (25), Expect = 4e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 152 tcggcccctccggctgcggcaagacgacggcgctgcg 188
|||| ||||| ||||||||||||||||||| ||||||
Sbjct: 107 tcggtccctcgggctgcggcaagacgacggtgctgcg 143
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00070 37959 38111 len=153
(153 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218276.1 [gene=proX] [protein=betaine/g... 303 2e-83
>lcl|NC_000962.2_cdsid_NP_218276.1 [gene=proX]
[protein=betaine/glycine ABC transporter
substrate-binding protein] [protein_id=NP_218276.1]
[location=complement(4204426..4205373)]
Length = 948
Score = 303 bits (153), Expect = 2e-83
Identities = 153/153 (100%)
Strand = Plus / Minus
Query: 1 gtgctgaagaggttggcggctgtggccgttccctccaccagtgctcgcacggtcaccgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gtgctgaagaggttggcggctgtggccgttccctccaccagtgctcgcacggtcaccgca 624
Query: 61 ccgccgccgtcgttgatggtcacgaagttgcccggcgcgatgtcgagtgagtatttgtgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ccgccgccgtcgttgatggtcacgaagttgcccggcgcgatgtcgagtgagtatttgtgc 564
Query: 121 cgcagcccgggcaacccggacggccgggtctga 153
|||||||||||||||||||||||||||||||||
Sbjct: 563 cgcagcccgggcaacccggacggccgggtctga 531
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00074 42168 40264 len=1905
(1905 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218279.1 [gene=Rv3762c] [protein=hydrol... 3729 0.0
>lcl|NC_000962.2_cdsid_NP_218279.1 [gene=Rv3762c] [protein=hydrolase]
[protein_id=NP_218279.1]
[location=complement(4206996..4208876)]
Length = 1881
Score = 3729 bits (1881), Expect = 0.0
Identities = 1881/1881 (100%)
Strand = Plus / Plus
Query: 25 gtgccgatggaacacaaacctcccactgccgtcatccaggcggcacacggtgaacactcg 84
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgccgatggaacacaaacctcccactgccgtcatccaggcggcacacggtgaacactcg 60
Query: 85 ttaccgttgcatgacacaacggatttcgacgacgccgatcgcggattcattgccgcgctg 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttaccgttgcatgacacaacggatttcgacgacgccgatcgcggattcattgccgcgctg 120
Query: 145 tccccgtgtgtgatcaaggctgccgatggtcgcgtggtgtgggacaacgacgcgtactcg 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tccccgtgtgtgatcaaggctgccgatggtcgcgtggtgtgggacaacgacgcgtactcg 180
Query: 205 tttctcgacggtgccgcgccgacatcggtgcatcccagcctgtggcggcaatcccagctg 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttctcgacggtgccgcgccgacatcggtgcatcccagcctgtggcggcaatcccagctg 240
Query: 265 accgcgaaacagggcctctaccaggtggtgccgggcatctatcaggtccgcggattcgat 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 accgcgaaacagggcctctaccaggtggtgccgggcatctatcaggtccgcggattcgat 300
Query: 325 atctccaatatcagcttcgttgagggtgacactgggctgatcgtcatcgacccgttggtg 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atctccaatatcagcttcgttgagggtgacactgggctgatcgtcatcgacccgttggtg 360
Query: 385 tccaccgaggtggccgccgccgcgctggacttgtatcgcgcccaccgcggagccgaccgc 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tccaccgaggtggccgccgccgcgctggacttgtatcgcgcccaccgcggagccgaccgc 420
Query: 445 cccgtggtcgcggtcatctacacccacagccatgtcgatcatttcggtggggtgctcggc 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cccgtggtcgcggtcatctacacccacagccatgtcgatcatttcggtggggtgctcggc 480
Query: 505 gtcaccacccaggccgacgtggacgcgggaaaggtggcggtgctggcgccggaggggttc 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtcaccacccaggccgacgtggacgcgggaaaggtggcggtgctggcgccggaggggttc 540
Query: 565 accgcgcacgccgtgcaggaaaacatctacgccggctcggcgatgatgcgccgtgcgggc 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 accgcgcacgccgtgcaggaaaacatctacgccggctcggcgatgatgcgccgtgcgggc 600
Query: 625 tacatgtacggcaccgtgttggcgcgcggtctccgggggcacgtcggctgcggcctcggg 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tacatgtacggcaccgtgttggcgcgcggtctccgggggcacgtcggctgcggcctcggg 660
Query: 685 cagacactgtcgaccggtgaggtttcgctcgtcgtgccgacggtcgacatcaccgagacc 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cagacactgtcgaccggtgaggtttcgctcgtcgtgccgacggtcgacatcaccgagacc 720
Query: 745 ggggagacccacaccatcgacggggtggagatcgagttccagatggccccgggcaccgag 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ggggagacccacaccatcgacggggtggagatcgagttccagatggccccgggcaccgag 780
Query: 805 gcccctgcggagatgcacttctatttcccgcgcttccgcgcgttgtgcatggccgaaaac 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gcccctgcggagatgcacttctatttcccgcgcttccgcgcgttgtgcatggccgaaaac 840
Query: 865 gccacgcataacctgcacaacctgctgaccctgcgcggcgccttggtgcgcgatccgcgc 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gccacgcataacctgcacaacctgctgaccctgcgcggcgccttggtgcgcgatccgcgc 900
Query: 925 gcctggtcgggctatctcaccgaggcgattgacacctttgccgaccgaaccgacgtggtg 984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gcctggtcgggctatctcaccgaggcgattgacacctttgccgaccgaaccgacgtggtg 960
Query: 985 ttcgcctcgcaccactggccgacgtggggacgcgagaagatcgtcgagttcttgtcgcaa 1044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ttcgcctcgcaccactggccgacgtggggacgcgagaagatcgtcgagttcttgtcgcaa 1020
Query: 1045 cagcgcgacatgtattcatatctgcacgatcagacgctgcggctgctgaaccagggctac 1104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 cagcgcgacatgtattcatatctgcacgatcagacgctgcggctgctgaaccagggctac 1080
Query: 1105 accggtgtggagatcgccgagatgttccagctgccaccggcgctgcagcgggcatggcac 1164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 accggtgtggagatcgccgagatgttccagctgccaccggcgctgcagcgggcatggcac 1140
Query: 1165 acccacggctactacgggtcggtcagccataacgtgaaggcgatctatcagcgttacatg 1224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 acccacggctactacgggtcggtcagccataacgtgaaggcgatctatcagcgttacatg 1200
Query: 1225 ggctggtttgacggtaacccgggctggttgtggccgcatccgcccgaggcgctggcgccg 1284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ggctggtttgacggtaacccgggctggttgtggccgcatccgcccgaggcgctggcgccg 1260
Query: 1285 cgttatgtcgacgcgttgggtggcatcgaccgagtgctggagctggcccgcgaagccttc 1344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 cgttatgtcgacgcgttgggtggcatcgaccgagtgctggagctggcccgcgaagccttc 1320
Query: 1345 gacgcaggtgatttccgttgggcggcaacgcttctcgaccatgcggtgttcgccgacagc 1404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 gacgcaggtgatttccgttgggcggcaacgcttctcgaccatgcggtgttcgccgacagc 1380
Query: 1405 gagcacgctgcggcccgcgggctctatgccgacaccctggagcagctggcctacggcgcg 1464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 gagcacgctgcggcccgcgggctctatgccgacaccctggagcagctggcctacggcgcg 1440
Query: 1465 gagtgtgcgacctggcgcaatttctttctgaccggggccgccgagctgcgcgacgggaac 1524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 gagtgtgcgacctggcgcaatttctttctgaccggggccgccgagctgcgcgacgggaac 1500
Query: 1525 ccgggcagctccgggcaagtcccggcgcccacgtttttcgcccagctgacgccggaccaa 1584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 ccgggcagctccgggcaagtcccggcgcccacgtttttcgcccagctgacgccggaccaa 1560
Query: 1585 atctttgacgtcctggcgatcagcatcaatggcccacgcgcatgggacctcgacctggcc 1644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 atctttgacgtcctggcgatcagcatcaatggcccacgcgcatgggacctcgacctggcc 1620
Query: 1645 atcgatttcaccttcaccgagccggatgtcaactatcggctcacgctgcgcaacggcgtg 1704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 atcgatttcaccttcaccgagccggatgtcaactatcggctcacgctgcgcaacggcgtg 1680
Query: 1705 ttgatacatcgcaagcttcccgccgatccggcgacggcgaacgcgacggtgacggtgggc 1764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 ttgatacatcgcaagcttcccgccgatccggcgacggcgaacgcgacggtgacggtgggc 1740
Query: 1765 gacaaggttcggttggtcgccgcggcgctgggcgatatcagctcacccggtttcgaggtg 1824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 gacaaggttcggttggtcgccgcggcgctgggcgatatcagctcacccggtttcgaggtg 1800
Query: 1825 ttcggcgaccggacggtgctgcagacattcttgagcgtcctcgaccggcccgattcggcc 1884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 ttcggcgaccggacggtgctgcagacattcttgagcgtcctcgaccggcccgattcggcc 1860
Query: 1885 ttcaacatcgtgacgccgtag 1905
|||||||||||||||||||||
Sbjct: 1861 ttcaacatcgtgacgccgtag 1881
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00077 44370 42850 len=1521
(1521 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218281.1 [gene=Rv3764c] [protein=two co... 2831 0.0
>lcl|NC_000962.2_cdsid_NP_218281.1 [gene=Rv3764c] [protein=two
component sensor kinase] [protein_id=NP_218281.1]
[location=complement(4209582..4211009)]
Length = 1428
Score = 2831 bits (1428), Expect = 0.0
Identities = 1428/1428 (100%)
Strand = Plus / Plus
Query: 94 gtgggaatcaccgcggcaaccgaaatggcgctgcgtcgtcatctggtggcacaacttgac 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgggaatcaccgcggcaaccgaaatggcgctgcgtcgtcatctggtggcacaacttgac 60
Query: 154 aaccaactcggcggaacgtcgtaccgctcggtgttgatgtatccggagaaaatgccccgt 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaccaactcggcggaacgtcgtaccgctcggtgttgatgtatccggagaaaatgccccgt 120
Query: 214 ccgccctggcggcacgagacgcacaactacatccggtcgggccccggtccgaggtttctc 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccgccctggcggcacgagacgcacaactacatccggtcgggccccggtccgaggtttctc 180
Query: 274 gatgctccgggccagccggccgggatggtggcggcggtggtcagcgacggcacgacggtc 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatgctccgggccagccggccgggatggtggcggcggtggtcagcgacggcacgacggtc 240
Query: 334 gccgccggatatctgaccggcagtggttcgcgggcggcgttgacgtcaaccggccggtcc 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gccgccggatatctgaccggcagtggttcgcgggcggcgttgacgtcaaccggccggtcc 300
Query: 394 cagctggaacggatcgccggcagccgcacaccgctgaccctggatctcgacggtctgggc 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cagctggaacggatcgccggcagccgcacaccgctgaccctggatctcgacggtctgggc 360
Query: 454 cggtaccgtgtgctggccgctccgagccgaaacgggcacgacgtcatcgtcaccggcctg 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cggtaccgtgtgctggccgctccgagccgaaacgggcacgacgtcatcgtcaccggcctg 420
Query: 514 tcgatgggcaacgtcgacgccacgatgttgcagatgctgatcattttcggaatcgtcacg 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcgatgggcaacgtcgacgccacgatgttgcagatgctgatcattttcggaatcgtcacg 480
Query: 574 gtgattgcgttggtcgccgcgacgaccgccggaatcgtcatcatcaagcgggcgctggcg 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtgattgcgttggtcgccgcgacgaccgccggaatcgtcatcatcaagcgggcgctggcg 540
Query: 634 ccgttgcggcgcgtcgcgcaaaccgcgagcgaagtcgtcgacctaccgttggatcgcggc 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ccgttgcggcgcgtcgcgcaaaccgcgagcgaagtcgtcgacctaccgttggatcgcggc 600
Query: 694 gaggtcaagctaccggtccgggtgcccgaacctgacgcaaacccctccaccgaggtgggg 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gaggtcaagctaccggtccgggtgcccgaacctgacgcaaacccctccaccgaggtgggg 660
Query: 754 caactcgggtcggcgctcaaccggatgctcgaccacatcgctgccgcactgtcggcgcgg 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 caactcgggtcggcgctcaaccggatgctcgaccacatcgctgccgcactgtcggcgcgg 720
Query: 814 caggccagtgaaacctgtgtgcgccagttcgttgccgatgccagtcatgaactgcgaact 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 caggccagtgaaacctgtgtgcgccagttcgttgccgatgccagtcatgaactgcgaact 780
Query: 874 ccccttgcggcgatccgtggttacacggaattgacgcagcggataggggacgatcccgag 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ccccttgcggcgatccgtggttacacggaattgacgcagcggataggggacgatcccgag 840
Query: 934 gccgtcgcacacgcgatgagccgggtggcatcggagaccgagcggataacacgtctcgtc 993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gccgtcgcacacgcgatgagccgggtggcatcggagaccgagcggataacacgtctcgtc 900
Query: 994 gaggacctgctgctgctggcgcgtctggactcggggcggccgctggaacgcggaccggtg 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gaggacctgctgctgctggcgcgtctggactcggggcggccgctggaacgcggaccggtg 960
Query: 1054 gacatgtcgcggcttgcggttgacgcggtcagcgacgctcatgttgccggaccagatcac 1113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gacatgtcgcggcttgcggttgacgcggtcagcgacgctcatgttgccggaccagatcac 1020
Query: 1114 cagtgggcgctcgacctgccccccgaaccggtggtcatcccgggtgatgcggcacggttg 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 cagtgggcgctcgacctgccccccgaaccggtggtcatcccgggtgatgcggcacggttg 1080
Query: 1174 caccaggtggtgaccaacctgctggccaacgcccgcgtgcacaccggtcccggcacgatc 1233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 caccaggtggtgaccaacctgctggccaacgcccgcgtgcacaccggtcccggcacgatc 1140
Query: 1234 gtgacgacgcgcttgagcaccgggccgacgcacgtcgtgctgcaggtgatcgacaatggg 1293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gtgacgacgcgcttgagcaccgggccgacgcacgtcgtgctgcaggtgatcgacaatggg 1200
Query: 1294 ccgggtattccggccgcgctgcagtccgaggttttcgagcggttcgcccgcggcgatacg 1353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ccgggtattccggccgcgctgcagtccgaggttttcgagcggttcgcccgcggcgatacg 1260
Query: 1354 tcacggtcccgccaagccggtagcaccgggctcggcctggcgatcgtctccgctgtggtc 1413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 tcacggtcccgccaagccggtagcaccgggctcggcctggcgatcgtctccgctgtggtc 1320
Query: 1414 aaggcgcacaacggaacgatcaccgtgagtagctcacccggatataccgagtttgcggtg 1473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 aaggcgcacaacggaacgatcaccgtgagtagctcacccggatataccgagtttgcggtg 1380
Query: 1474 cggttgccacttgacggatggcaaccgctcgaatcgtcgccgcgctag 1521
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 cggttgccacttgacggatggcaaccgctcgaatcgtcgccgcgctag 1428
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00078 44531 44641 len=111
(111 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218282.1 [gene=Rv3765c] [protein=two co... 220 2e-58
>lcl|NC_000962.2_cdsid_NP_218282.1 [gene=Rv3765c] [protein=two
component transcriptional regulator]
[protein_id=NP_218282.1]
[location=complement(4211080..4211784)]
Length = 705
Score = 220 bits (111), Expect = 2e-58
Identities = 111/111 (100%)
Strand = Plus / Minus
Query: 1 gtgcatcatgaaccgcagcagctcgaactcggtggacgtcaacgacaccggttcgccggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 gtgcatcatgaaccgcagcagctcgaactcggtggacgtcaacgacaccggttcgccggc 463
Query: 61 gcgcatcacctcgtggctgtcttcgtccagcaccaagtctccgaccactag 111
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gcgcatcacctcgtggctgtcttcgtccagcaccaagtctccgaccactag 412
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00081 45223 45390 len=168
(168 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00082 45811 45993 len=183
(183 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218283.1 [gene=Rv3766] [protein=hypothe... 363 e-101
>lcl|NC_000962.2_cdsid_NP_218283.1 [gene=Rv3766]
[protein=hypothetical protein] [protein_id=NP_218283.1]
[location=4212293..4212982]
Length = 690
Score = 363 bits (183), Expect = e-101
Identities = 183/183 (100%)
Strand = Plus / Plus
Query: 1 atgccaacgcctacgacttcttcaacatgtggcgtgttcgcccggcgggcctgcgcgtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 atgccaacgcctacgacttcttcaacatgtggcgtgttcgcccggcgggcctgcgcgtca 310
Query: 61 ttggcgcgggttatggttccaatccgaaccttcccggacaagtggcgcaccagtacaccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ttggcgcgggttatggttccaatccgaaccttcccggacaagtggcgcaccagtacaccg 370
Query: 121 acggcagtgggtatagccccaatcttccacagggcgctccaccgttcggtcgatgcgata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 acggcagtgggtatagccccaatcttccacagggcgctccaccgttcggtcgatgcgata 430
Query: 181 tga 183
|||
Sbjct: 431 tga 433
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00083 48820 48984 len=165
(165 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218287.1 [gene=Rv3770c] [protein=hypoth... 327 1e-90
>lcl|NC_000962.2_cdsid_NP_218287.1 [gene=Rv3770c]
[protein=hypothetical protein] [protein_id=NP_218287.1]
[location=complement(4215200..4215775)]
Length = 576
Score = 327 bits (165), Expect = 1e-90
Identities = 165/165 (100%)
Strand = Plus / Minus
Query: 1 atgatcggggtgttggtccaagcgctgagcccgaacaccggcagctcccagaccagaccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 atgatcggggtgttggtccaagcgctgagcccgaacaccggcagctcccagaccagaccg 165
Query: 61 atgagcgtgccgagcaacagcatccgcgcgagctcgggtcgagtccttcgagcgcgcagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 atgagcgtgccgagcaacagcatccgcgcgagctcgggtcgagtccttcgagcgcgcagc 105
Query: 121 atgagcaccacgaccgcgagcgcgacgagcaggtcggctacgtag 165
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 atgagcaccacgaccgcgagcgcgacgagcaggtcggctacgtag 60
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00084 49753 49547 len=207
(207 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218288.1 [gene=Rv3771c] [protein=hypoth... 163 6e-41
lcl|NC_000962.2_cdsid_NP_217327.1 [gene=Rv2811] [protein=hypothe... 131 2e-31
>lcl|NC_000962.2_cdsid_NP_218288.1 [gene=Rv3771c]
[protein=hypothetical protein] [protein_id=NP_218288.1]
[location=complement(4216404..4216730)]
Length = 327
Score = 163 bits (82), Expect = 6e-41
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 1 gtgccagttcgcgctgtccacggtgtcgctggccgagacggcggtggcggtatcgggtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gtgccagttcgcgctgtccacggtgtcgctggccgagacggcggtggcggtatcgggtgg 305
Query: 61 gcggctggtggcgccggggtga 82
||||||||||||||||||||||
Sbjct: 306 gcggctggtggcgccggggtga 327
>lcl|NC_000962.2_cdsid_NP_217327.1 [gene=Rv2811]
[protein=hypothetical protein] [protein_id=NP_217327.1]
[location=3116139..3116747]
Length = 609
Score = 131 bits (66), Expect = 2e-31
Identities = 96/106 (90%)
Strand = Plus / Plus
Query: 12 cgctgtccacggtgtcgctggccgagacggcggtggcggtatcgggtgggcggctggtgg 71
||||| |||||||||||||||| ||||| ||||| ||||| || ||||||||| || |||
Sbjct: 500 cgctgcccacggtgtcgctggctgagaccgcggtagcggtgtcaggtgggcggttgttgg 559
Query: 72 cgccggggtgacccggcgagtgggtgcaacacgagtcgaccctgcc 117
||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 560 cgccgggctggcccggcgagtgggtgcaacacgagtcgaccctgcc 605
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00085 50797 50369 len=429
(429 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218289.1 [gene=hisC2] [protein=aminotra... 785 0.0
>lcl|NC_000962.2_cdsid_NP_218289.1 [gene=hisC2]
[protein=aminotransferase] [protein_id=NP_218289.1]
[location=4217134..4218195]
Length = 1062
Score = 785 bits (396), Expect = 0.0
Identities = 396/396 (100%)
Strand = Plus / Minus
Query: 1 gtggtcggtcaacggcacctggatggggatagcgccggcgacccggacctgtggtggata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gtggtcggtcaacggcacctggatggggatagcgccggcgacccggacctgtggtggata 337
Query: 61 gagctcaaagctgcgccagccgaagaccacttcgtcaccaaccgaggcggtgacctgaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gagctcaaagctgcgccagccgaagaccacttcgtcaccaaccgaggcggtgacctgaac 277
Query: 121 gagttgctggcagaggctgaccgagccgcaaccgacggcgacgtgctcgggagcgaagtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gagttgctggcagaggctgaccgagccgcaaccgacggcgacgtgctcgggagcgaagtc 217
Query: 181 cgggccaagatgccgggccagcgcggccttgagctgcacgcagccgttgtcggggtagcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 cgggccaagatgccgggccagcgcggccttgagctgcacgcagccgttgtcggggtagcg 157
Query: 241 gttgaccgtgtcggtagcccggtcgatggcggcacggacgctgggcagcgggccgaacac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 gttgaccgtgtcggtagcccggtcgatggcggcacggacgctgggcagcgggccgaacac 97
Query: 301 ggtttcgttgctggccagcttgatggcgcccggcaccgttttgccgggcacataaaccgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 ggtttcgttgctggccagcttgatggcgcccggcaccgttttgccgggcacataaaccgg 37
Query: 361 cagcccagccagctcgggtcgcaggcgggcggtcac 396
||||||||||||||||||||||||||||||||||||
Sbjct: 36 cagcccagccagctcgggtcgcaggcgggcggtcac 1
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00086 52953 54200 len=1248
(1248 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218292.1 [gene=lipE] [protein=lipase Li... 2474 0.0
>lcl|NC_000962.2_cdsid_NP_218292.1 [gene=lipE] [protein=lipase LipE]
[protein_id=NP_218292.1] [location=4219685..4220932]
Length = 1248
Score = 2474 bits (1248), Expect = 0.0
Identities = 1248/1248 (100%)
Strand = Plus / Plus
Query: 1 atgcgcgctggcgacggcaagatccgtgtcccggccgacctagacgccgtcacggcaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgcgcgctggcgacggcaagatccgtgtcccggccgacctagacgccgtcacggcaacc 60
Query: 61 ggcgaagaggaccactccgaaatcgacggtgcggccgtcgaccggatctggcgggccgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggcgaagaggaccactccgaaatcgacggtgcggccgtcgaccggatctggcgggccgca 120
Query: 121 cgccattggtatcgggccggtatgcatcccgcgatccagttgtgcattcggcaccatggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgccattggtatcgggccggtatgcatcccgcgatccagttgtgcattcggcaccatggg 180
Query: 181 cgggtcgtgctcaaccgcgcgatcgggcacggctggggcaacgcccccaccgatgaggcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgggtcgtgctcaaccgcgcgatcgggcacggctggggcaacgcccccaccgatgaggcc 240
Query: 241 gatgccgagaagatcccggtgacgactgacaccccgttctgcgtgtactcggcggccaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gatgccgagaagatcccggtgacgactgacaccccgttctgcgtgtactcggcggccaag 300
Query: 301 gcgatcacggcgaccgttgtacacatgctcgtcgagcgcggacacttcgcgctcgacgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcgatcacggcgaccgttgtacacatgctcgtcgagcgcggacacttcgcgctcgacgac 360
Query: 361 cgcgtctgcgagtacctgccctcctacaccagtcatggcaagcaccgcaccacgatccgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgcgtctgcgagtacctgccctcctacaccagtcatggcaagcaccgcaccacgatccgg 420
Query: 421 cacgtgctgacccacagcgcaggcgtcccgtttcccaccgggccccgacccgacgtcaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cacgtgctgacccacagcgcaggcgtcccgtttcccaccgggccccgacccgacgtcaga 480
Query: 481 cgcgcggacgaccatgaatacgcggtggaaaggctcggcgaactacggccgctatatcgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgcgcggacgaccatgaatacgcggtggaaaggctcggcgaactacggccgctatatcgg 540
Query: 541 cccggactggtacacatctaccacgcgctgacctggggtccgttgatgcgtgagatcgtc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cccggactggtacacatctaccacgcgctgacctggggtccgttgatgcgtgagatcgtc 600
Query: 601 tacgcggccaccggcaaggaaatccgcgagatcctggccaccgagatcctcgacccgctg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tacgcggccaccggcaaggaaatccgcgagatcctggccaccgagatcctcgacccgctg 660
Query: 661 ggctttcggtggaccaacttcggcgtcgccgagcgcgatgtgccgctggtcgcgcccagt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ggctttcggtggaccaacttcggcgtcgccgagcgcgatgtgccgctggtcgcgcccagt 720
Query: 721 cacgccaccgggcggcagctgccgccggtgatcgccgcggtgttccgcaaggcgatcggc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cacgccaccgggcggcagctgccgccggtgatcgccgcggtgttccgcaaggcgatcggc 780
Query: 781 ggaaccgtgcacgagatcatcccctatacgaacaccccgttcttcctcagcaccatcctc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ggaaccgtgcacgagatcatcccctatacgaacaccccgttcttcctcagcaccatcctc 840
Query: 841 ccgtcgtccaacactgtgtcaacggccaacgagctgtcccgctttatggaaatcctgcgc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ccgtcgtccaacactgtgtcaacggccaacgagctgtcccgctttatggaaatcctgcgc 900
Query: 901 cgcggtggcgaactcgacggtgttcgtgtactgagtcccgagacgctgcgcggcgcggtg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 cgcggtggcgaactcgacggtgttcgtgtactgagtcccgagacgctgcgcggcgcggtg 960
Query: 961 acggaatgccggcgcttgcgaccggacttcgccaccgggctgatgccgcttcgctggggc 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 acggaatgccggcgcttgcgaccggacttcgccaccgggctgatgccgcttcgctggggc 1020
Query: 1021 accgggttcatgctggggtccgccaagtacgggccgttcgggcgcaacgcgccggcggca 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 accgggttcatgctggggtccgccaagtacgggccgttcgggcgcaacgcgccggcggca 1080
Query: 1081 ttcggccatctcggtctggtcaacattgcggtttgggccgaccccgaacgagctctgtcg 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ttcggccatctcggtctggtcaacattgcggtttgggccgaccccgaacgagctctgtcg 1140
Query: 1141 ggcggtttgatcagtagcggcaaacccggtagggaccccgaggctgggcgctacggcgcc 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 ggcggtttgatcagtagcggcaaacccggtagggaccccgaggctgggcgctacggcgcc 1200
Query: 1201 ctgctgaacgccattaccgccgaaataccacgggcatcgtcgggctga 1248
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ctgctgaacgccattaccgccgaaataccacgggcatcgtcgggctga 1248
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00088 54288 55916 len=1629
(1629 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218293.1 [gene=Rv3776] [protein=hypothe... 3092 0.0
lcl|NC_000962.2_cdsid_NP_216616.1 [gene=Rv2100] [protein=hypothe... 646 0.0
lcl|NC_000962.2_cdsid_NP_214907.1 [gene=Rv0393] [protein=hypothe... 58 2e-08
>lcl|NC_000962.2_cdsid_NP_218293.1 [gene=Rv3776] [protein=hypothetical
protein] [protein_id=NP_218293.1]
[location=4221089..4222648]
Length = 1560
Score = 3092 bits (1560), Expect = 0.0
Identities = 1560/1560 (100%)
Strand = Plus / Plus
Query: 70 atgttcgagatatcgttgtcggacccggtggagctgcgcgatgccgacgatgccgcgctg 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgttcgagatatcgttgtcggacccggtggagctgcgcgatgccgacgatgccgcgctg 60
Query: 130 cttgccgcaatcgaggactgcgcgcgtgccgaggtggccgccggcgcccgccgcctgtca 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttgccgcaatcgaggactgcgcgcgtgccgaggtggccgccggcgcccgccgcctgtca 120
Query: 190 gcgatcgccgaactcaccagccggcgcaccggcaatgaccagcgggccgactgggcgtgc 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcgatcgccgaactcaccagccggcgcaccggcaatgaccagcgggccgactgggcgtgc 180
Query: 250 gacggctgggactgcgcggccgccgaggtggccgccgcactgaccgtaagccaccgtaag 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gacggctgggactgcgcggccgccgaggtggccgccgcactgaccgtaagccaccgtaag 240
Query: 310 gcctccgggcagatgcatctgagcctcaccctaaaccgactgccccaggtggcggcgttg 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcctccgggcagatgcatctgagcctcaccctaaaccgactgccccaggtggcggcgttg 300
Query: 370 tttttggccgggcagctcagcgcgcggctggtgtcgatcatcgcctggcgcacctacctg 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttttggccgggcagctcagcgcgcggctggtgtcgatcatcgcctggcgcacctacctg 360
Query: 430 gttcgcgaccccgaagcgctgagtctgctcgatgccgccctcgccaaacacgccacagcg 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gttcgcgaccccgaagcgctgagtctgctcgatgccgccctcgccaaacacgccacagcg 420
Query: 490 tggggtccgctgtcggcccccaaactggaaaaggctatcgactcctggattgatcggtac 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tggggtccgctgtcggcccccaaactggaaaaggctatcgactcctggattgatcggtac 480
Query: 550 gatcccgccgcactgcgacgcacccgtatctcggcccgcagccgcgacctgtgcatcggt 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gatcccgccgcactgcgacgcacccgtatctcggcccgcagccgcgacctgtgcatcggt 540
Query: 610 gatcccgacgaagatgccggcaccgccgcactatggggccggttgtttgccaccgacgcc 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gatcccgacgaagatgccggcaccgccgcactatggggccggttgtttgccaccgacgcc 600
Query: 670 gccatgctggataagcgcctcacccagctggcccacggcgtctgcgacgacgatccccga 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gccatgctggataagcgcctcacccagctggcccacggcgtctgcgacgacgatccccga 660
Query: 730 accatcgcccagcggcgcgccgatgcgctgggcgcgctggccgccggcgctgatcggctt 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 accatcgcccagcggcgcgccgatgcgctgggcgcgctggccgccggcgctgatcggctt 720
Query: 790 acctgcggctgcggtaattccgactgcccatccagtgccggcaaccaccggcaggcaacc 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 acctgcggctgcggtaattccgactgcccatccagtgccggcaaccaccggcaggcaacc 780
Query: 850 ggtgtggtcatccacgtcgtcgccgacgcggcagcactaggcgctgcacctgacccacgc 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ggtgtggtcatccacgtcgtcgccgacgcggcagcactaggcgctgcacctgacccacgc 840
Query: 910 ctatccggcccggaacccgcgttggcacccgaagcacccgccaccccggcggtcaagccg 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ctatccggcccggaacccgcgttggcacccgaagcacccgccaccccggcggtcaagccg 900
Query: 970 ccggccgcgctgatcagcggcgggggtgtggtgcccgcgccactgctggccgagctgatc 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ccggccgcgctgatcagcggcgggggtgtggtgcccgcgccactgctggccgagctgatc 960
Query: 1030 cgcggtggggccgccctcagccgcatgcgccatcccggcgatctgcgatcggagccgcac 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 cgcggtggggccgccctcagccgcatgcgccatcccggcgatctgcgatcggagccgcac 1020
Query: 1090 taccggccgtcggccaagctggccgaattcgtccggatccgagacatgacctgccgattc 1149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 taccggccgtcggccaagctggccgaattcgtccggatccgagacatgacctgccgattc 1080
Query: 1150 cccggctgcgaccagcccaccgaattctgcgacatcgaccacacactgccctacccactc 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 cccggctgcgaccagcccaccgaattctgcgacatcgaccacacactgccctacccactc 1140
Query: 1210 gggcccacccacccgtccaacctgaaatgcctctgccgcaaacaccaccttctcaagacc 1269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gggcccacccacccgtccaacctgaaatgcctctgccgcaaacaccaccttctcaagacc 1200
Query: 1270 ttctggaccggctggcgtgatgtgcaactgcccgacggcaccatcatctggaccgcgccc 1329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ttctggaccggctggcgtgatgtgcaactgcccgacggcaccatcatctggaccgcgccc 1260
Query: 1330 aacggccacacctacaccactcatcccgacagccgaatcttcttacctagctggcacacc 1389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 aacggccacacctacaccactcatcccgacagccgaatcttcttacctagctggcacacc 1320
Query: 1390 accaccgccgcactacccccagcaccatccccgccagccattggtcccactcacaccctg 1449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 accaccgccgcactacccccagcaccatccccgccagccattggtcccactcacaccctg 1380
Query: 1450 ctgatgccacgacggcgccggacccgagcggccgagctggcccaccgcattaaacgcgaa 1509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 ctgatgccacgacggcgccggacccgagcggccgagctggcccaccgcattaaacgcgaa 1440
Query: 1510 cgcgcccacgtcacccaacgcaacaagccacccccaagcggcggggatacagcggtggcg 1569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 cgcgcccacgtcacccaacgcaacaagccacccccaagcggcggggatacagcggtggcg 1500
Query: 1570 gagggatttgaacccccggacggtgttagccgtctctcgctttcaaggcgagtgcattag 1629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 gagggatttgaacccccggacggtgttagccgtctctcgctttcaaggcgagtgcattag 1560
>lcl|NC_000962.2_cdsid_NP_216616.1 [gene=Rv2100]
[protein=hypothetical protein] [protein_id=NP_216616.1]
[location=2358389..2360041]
Length = 1653
Score = 646 bits (326), Expect = 0.0
Identities = 721/850 (84%), Gaps = 2/850 (0%)
Strand = Plus / Plus
Query: 70 atgttcgagatatcgttgtcggacccggtggagctgcgc-gatgccgacgatgccgcgct 128
||||||||||||||| || |||||||| ||||||| || ||| |||| |||| ||||||
Sbjct: 115 atgttcgagatatcgctgccggacccgacggagctgtgccgat-ccgatgatggcgcgct 173
Query: 129 gcttgccgcaatcgaggactgcgcgcgtgccgaggtggccgccggcgcccgccgcctgtc 188
| | ||||| |||||||||||||| |||| |||| ||| || ||||||| || ||||
Sbjct: 174 ggtggccgcgatcgaggactgcgctcgtgtggaggcggctgcgagcgcccggcggttgtc 233
Query: 189 agcgatcgccgaactcaccagccggcgcaccggcaatgaccagcgggccgactgggcgtg 248
||||||||||| || ||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 234 ggcgatcgccgagctgaccggccggcgcaccggcgcggaccagcgggccgactgggcgtg 293
Query: 249 cgacggctgggactgcgcggccgccgaggtggccgccgcactgaccgtaagccaccgtaa 308
||| |||||||||||||||||| |||||||| || || |||| | |||||| | ||
Sbjct: 294 tgacttctgggactgcgcggccgcggaggtggctgcggcgttgactatcagccacggcaa 353
Query: 309 ggcctccgggcagatgcatctgagcctcaccctaaaccgactgccccaggtggcggcgtt 368
|||||||| || |||||||||||||| |||| ||||| ||||||||||||||||||||
Sbjct: 354 agcctccggacaaatgcatctgagccttgccctgaaccggctgccccaggtggcggcgtt 413
Query: 369 gtttttggccgggcagctcagcgcgcggctggtgtcgatcatcgcctggcgcacctacct 428
||||||||||||||| || | |||||||| | ||||||||||||||||| ||||||||
Sbjct: 414 gtttttggccgggcatcttggtgcgcggcttttctcgatcatcgcctggcggacctacct 473
Query: 429 ggttcgcgaccccgaagcgctgagtctgctcgatgccgccctcgccaaacacgccacagc 488
||||||||||| | || ||||||||||||||||||||||| ||| |||||||| ||
Sbjct: 474 cgttcgcgacccgcacgcactgagtctgctcgatgccgccctggccgaacacgccggcgc 533
Query: 489 gtggggtccgctgtcggcccccaaactggaaaaggctatcgactcctggattgatcggta 548
|||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||| ||
Sbjct: 534 gtgggggccgctgtcggcccccaaactggaaaaggccatcgactcctggatcgatcgcta 593
Query: 549 cgatcccgccgcactgcgacgcacccgtatctcggcccgcagccgcgacctgtgcatcgg 608
|||||||| || ||||| |||| ||||||||||||||||| ||||||||| ||||||||
Sbjct: 594 cgatcccggggcgctgcggcgcagccgtatctcggcccgcacccgcgacctatgcatcgg 653
Query: 609 tgatcccgacgaagatgccggcaccgccgcactatggggccggttgtttgccaccgacgc 668
||||||||| || || |||||||||||||| || ||||||||| ||| ||||||||||||
Sbjct: 654 tgatcccgatgaggacgccggcaccgccgcgctgtggggccggctgtatgccaccgacgc 713
Query: 669 cgccatgctggataagcgcctcacccagctggcccacggcgtctgcgacgacgatccccg 728
||| ||||||||| || |||||| || ||||||||||||| ||||| || || || ||
Sbjct: 714 cgcgatgctggatcgccggctcaccgagatggcccacggcgtgtgcgaggatgacccgcg 773
Query: 729 aaccatcgcccagcggcgcgccgatgcgctgggcgcgctggccgccggcgctgatcggct 788
||| | |||||||| |||||||| |||||||||||||||||||||||||| || | ||
Sbjct: 774 caccctggcccagcgccgcgccgacgcgctgggcgcgctggccgccggcgccgaccacct 833
Query: 789 tacctgcggctgcggtaattccgactgcccatccagtgccggcaaccaccggcaggcaac 848
| ||||||||||| || |||||||||| ||| ||||||||||| || || ||| |
Sbjct: 834 ggcgtgcggctgcggcaagcccgactgcccctccggtgccggcaacgacgagcgggccgc 893
Query: 849 cggtgtggtcatccacgtcgtcgccgacgcggcagcactaggcgctgcacctgacccacg 908
|||||||||||||||||||||||||||||| ||||||| | ||| ||| |||||||
Sbjct: 894 cggtgtggtcatccacgtcgtcgccgacgcctcagcacttgacgcacaacccgacccaca 953
Query: 909 cctatccggc 918
||||||||||
Sbjct: 954 cctatccggc 963
Score = 159 bits (80), Expect = 8e-39
Identities = 140/160 (87%)
Strand = Plus / Plus
Query: 1249 aaacaccaccttctcaagaccttctggaccggctggcgtgatgtgcaactgcccgacggc 1308
|||||||||||| | || || |||||||| |||||||| |||||||| | ||||| |||
Sbjct: 1339 aaacaccaccttttgaaaactttctggacgggctggcgggatgtgcagttacccgatggc 1398
Query: 1309 accatcatctggaccgcgcccaacggccacacctacaccactcatcccgacagccgaatc 1368
|| |||||||||||||||||||||||||||||||||| || ||||||| |||||| |||
Sbjct: 1399 acggtcatctggaccgcgcccaacggccacacctacactacccatcccggcagccgcatc 1458
Query: 1369 ttcttacctagctggcacaccaccaccgccgcactacccc 1408
||||| || | |||||||||||||||||||| ||||||||
Sbjct: 1459 ttctttcccacctggcacaccaccaccgccgaactacccc 1498
Score = 153 bits (77), Expect = 5e-37
Identities = 125/141 (88%)
Strand = Plus / Plus
Query: 987 cggcgggggtgtggtgcccgcgccactgctggccgagctgatccgcggtggggccgccct 1046
|||||| ||||||||||||||||| ||||||||||| || ||||| ||||||||| || |
Sbjct: 1077 cggcggcggtgtggtgcccgcgccgctgctggccgaactcatccggggtggggccaccat 1136
Query: 1047 cagccgcatgcgccatcccggcgatctgcgatcggagccgcactaccggccgtcggccaa 1106
||||| ||||||||||||||||||| | | ||||||||||||||||||||||||||
Sbjct: 1137 cagccaagtgcgccatcccggcgatctcgcagcagagccgcactaccggccgtcggccaa 1196
Query: 1107 gctggccgaattcgtccggat 1127
|||||| ||||||||||||||
Sbjct: 1197 gctggctgaattcgtccggat 1217
Score = 85.7 bits (43), Expect = 1e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 1446 cctgctgatgccacgacggcgccggacccgagcggccgagctggcccaccgcattaaacg 1505
|||| ||||||| |||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 1536 cctgatgatgccgcgacggcgccggacccgagccgccgagctggcccaccgcatcaacgc 1595
Query: 1506 cgaacgcgccc 1516
|||||||||||
Sbjct: 1596 cgaacgcgccc 1606
>lcl|NC_000962.2_cdsid_NP_214907.1 [gene=Rv0393]
[protein=hypothetical protein] [protein_id=NP_214907.1]
[location=472781..474106]
Length = 1326
Score = 58.0 bits (29), Expect = 2e-08
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 739 cagcggcgcgccgatgcgctgggcgcgctggccgccggcgctgatcggcttacctgcggc 798
||||| |||||||| |||||||||||| |||| ||||| || |||||||| ||||| ||
Sbjct: 529 cagcgccgcgccgacgcgctgggcgcgttggcggccggggcggatcggctggcctgccgc 588
Query: 799 tgcggtaattccgactg 815
|||| ||| |||||||
Sbjct: 589 tgcgacaatcccgactg 605
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00089 56242 56358 len=117
(117 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218294.1 [gene=Rv3777] [protein=oxidore... 232 4e-62
>lcl|NC_000962.2_cdsid_NP_218294.1 [gene=Rv3777]
[protein=oxidoreductase] [protein_id=NP_218294.1]
[location=4222694..4223680]
Length = 987
Score = 232 bits (117), Expect = 4e-62
Identities = 117/117 (100%)
Strand = Plus / Plus
Query: 1 atgccgaatacgttgccgttccggccgaccaggtgctgccgattccgccgagcgtcaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 atgccgaatacgttgccgttccggccgaccaggtgctgccgattccgccgagcgtcaacc 340
Query: 61 tggtcgactcagccgccctgcccgaagtggcgtgcacggtgtggtcgaacctggtga 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tggtcgactcagccgccctgcccgaagtggcgtgcacggtgtggtcgaacctggtga 397
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00093 57582 57695 len=114
(114 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218295.1 [gene=Rv3778c] [protein=aminot... 226 3e-60
>lcl|NC_000962.2_cdsid_NP_218295.1 [gene=Rv3778c]
[protein=aminotransferase] [protein_id=NP_218295.1]
[location=complement(4223699..4224895)]
Length = 1197
Score = 226 bits (114), Expect = 3e-60
Identities = 114/114 (100%)
Strand = Plus / Minus
Query: 1 atggtcgaccaccaccagtgcccccacgtcgtgcaccagtttggtcatcgcccgcagatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 atggtcgaccaccaccagtgcccccacgtcgtgcaccagtttggtcatcgcccgcagatc 523
Query: 61 ggtgaccccgcccagcgttccggatgcggagttgacggcgaccagcctggttga 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 ggtgaccccgcccagcgttccggatgcggagttgacggcgaccagcctggttga 469
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00095 57083 56967 len=117
(117 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218295.1 [gene=Rv3778c] [protein=aminot... 232 4e-62
lcl|NC_000962.2_cdsid_NP_215897.1 [gene=pyrC] [protein=dihydroor... 48 1e-06
>lcl|NC_000962.2_cdsid_NP_218295.1 [gene=Rv3778c]
[protein=aminotransferase] [protein_id=NP_218295.1]
[location=complement(4223699..4224895)]
Length = 1197
Score = 232 bits (117), Expect = 4e-62
Identities = 117/117 (100%)
Strand = Plus / Plus
Query: 1 gtgctcgacgtgctgggcgtcaacgacgtcggcggcgcggtcaccgtcgggctggcgcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gtgctcgacgtgctgggcgtcaacgacgtcggcggcgcggtcaccgtcgggctggcgcat 1140
Query: 61 tactcgacgatggccgaagtcgaccagctggtgcgcgcgctggcgtcgctaggttga 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 tactcgacgatggccgaagtcgaccagctggtgcgcgcgctggcgtcgctaggttga 1197
>lcl|NC_000962.2_cdsid_NP_215897.1 [gene=pyrC]
[protein=dihydroorotase] [protein_id=NP_215897.1]
[location=1554188..1555480]
Length = 1293
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 33 cggcgcggtcaccgtcgggctggc 56
||||||||||||||||||||||||
Sbjct: 360 cggcgcggtcaccgtcgggctggc 383
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00096 58253 60253 len=2001
(2001 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218296.1 [gene=Rv3779] [protein=transme... 3967 0.0
>lcl|NC_000962.2_cdsid_NP_218296.1 [gene=Rv3779]
[protein=transmembrane protein alanine and leucine rich]
[protein_id=NP_218296.1] [location=4224985..4226985]
Length = 2001
Score = 3967 bits (2001), Expect = 0.0
Identities = 2001/2001 (100%)
Strand = Plus / Plus
Query: 1 gtgggcctgtggttcggtacgctaatcgctttgattttgctgatagcgccgggggcaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgggcctgtggttcggtacgctaatcgctttgattttgctgatagcgccgggggcaatg 60
Query: 61 gttgctcgcatcgcccagctgaggtggccggtcgccatcgcggttggcccggcgctgaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttgctcgcatcgcccagctgaggtggccggtcgccatcgcggttggcccggcgctgaca 120
Query: 121 tacggcgtggtggcactcgcgatcatcccctatggcgcgctcggaattccctggaacggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tacggcgtggtggcactcgcgatcatcccctatggcgcgctcggaattccctggaacggt 180
Query: 181 tggaccgcgctggccgccttggcggtgacgtgcgctgtagcgaccggtttgcagctactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggaccgcgctggccgccttggcggtgacgtgcgctgtagcgaccggtttgcagctactg 240
Query: 241 cttgcccgttttcgggacctcgacgccgaggcacttgcggttagccgctggcccgcggtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cttgcccgttttcgggacctcgacgccgaggcacttgcggttagccgctggcccgcggtt 300
Query: 301 acggtcgccgccggggtgctgctgggcgccctgttgatcggatgggccgcatatcgcggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acggtcgccgccggggtgctgctgggcgccctgttgatcggatgggccgcatatcgcggc 360
Query: 361 ataccgcactggcagtccatccccagcacctgggacgcggtctggcacgccaacaccgta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ataccgcactggcagtccatccccagcacctgggacgcggtctggcacgccaacaccgta 420
Query: 421 cgtttcatcctggacaccggccaggcgtcctcgactcacatgggggagcttcgcaacgtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgtttcatcctggacaccggccaggcgtcctcgactcacatgggggagcttcgcaacgtc 480
Query: 481 gagacccatgccccgttgtactacccgtcggtgttccacgggctggtcgcggtgttctgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gagacccatgccccgttgtactacccgtcggtgttccacgggctggtcgcggtgttctgc 540
Query: 541 cagttaaccggcgcggcacccaccaccggctacacactgagttcgctggccgcctcggtc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cagttaaccggcgcggcacccaccaccggctacacactgagttcgctggccgcctcggtc 600
Query: 601 tggctgtttccggtcagtgcagccgttctcacctggcgcgcggtgcgctcacacccgggc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tggctgtttccggtcagtgcagccgttctcacctggcgcgcggtgcgctcacacccgggc 660
Query: 661 gcgctgtggtcggcctcctgcgcctcggcagagtggcgcgccgccggagcggcgggcacc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gcgctgtggtcggcctcctgcgcctcggcagagtggcgcgccgccggagcggcgggcacc 720
Query: 721 gccgcggcactctcggcgtcgttcaccgcggtgccctacgtcgagttcgataccgccgct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gccgcggcactctcggcgtcgttcaccgcggtgccctacgtcgagttcgataccgccgct 780
Query: 781 atgcccaacctggcggcctacggcatcgcggtgccgacgatggtgctgatcacctcgaca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 atgcccaacctggcggcctacggcatcgcggtgccgacgatggtgctgatcacctcgaca 840
Query: 841 ttgcggcaccgcgaccgcatcccggtggccgtgctagcgctggtcggcgtcttctcactg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ttgcggcaccgcgaccgcatcccggtggccgtgctagcgctggtcggcgtcttctcactg 900
Query: 901 cacattaccggcggtatcgtcgtagcgctgttggtgtcggcctggtggcttttcgaggca 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 cacattaccggcggtatcgtcgtagcgctgttggtgtcggcctggtggcttttcgaggca 960
Query: 961 ctgcggcatcctgtgcgatcaaggctggccgacctgttgacgctggccggcgtggcagcg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ctgcggcatcctgtgcgatcaaggctggccgacctgttgacgctggccggcgtggcagcg 1020
Query: 1021 atggccgggttggtcatgttgccgcagttcttgagcgtcaggcagcaggaagacatcatc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 atggccgggttggtcatgttgccgcagttcttgagcgtcaggcagcaggaagacatcatc 1080
Query: 1081 gccggacacgcttttcccacctatctcagcaagaagcgtgggctgttcgacgctgttttc 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gccggacacgcttttcccacctatctcagcaagaagcgtgggctgttcgacgctgttttc 1140
Query: 1141 cagcactcccgccatctcaacgacttcccggtccagtacgcgctcattgtgttggccgcc 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 cagcactcccgccatctcaacgacttcccggtccagtacgcgctcattgtgttggccgcc 1200
Query: 1201 atcggcgggctcattctgctggtcaagaagatctggtggccgctggcggtttggctgctg 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 atcggcgggctcattctgctggtcaagaagatctggtggccgctggcggtttggctgctg 1260
Query: 1261 ttgattgtgatgaacgtcgacgcgggaacaccgttgggcggacctatcggaggggtggcc 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 ttgattgtgatgaacgtcgacgcgggaacaccgttgggcggacctatcggaggggtggcc 1320
Query: 1321 ggcgcactcggcgagttcttctatcacgatccgcgccgcatcgcggcggccacaaccctg 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 ggcgcactcggcgagttcttctatcacgatccgcgccgcatcgcggcggccacaaccctg 1380
Query: 1381 ctgttgatgctgatggcaggtgtggcgctgttcgcgacagtcatgttgctagtggccgcg 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 ctgttgatgctgatggcaggtgtggcgctgttcgcgacagtcatgttgctagtggccgcg 1440
Query: 1441 gcgaaacgactgaccgaccgtttcagaccccagccggtgtctgtctgggcatcggcgacc 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 gcgaaacgactgaccgaccgtttcagaccccagccggtgtctgtctgggcatcggcgacc 1500
Query: 1501 gcgacactactgatcggagccactctggtcagtgcgtggcattactttccccggcaccga 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 gcgacactactgatcggagccactctggtcagtgcgtggcattactttccccggcaccga 1560
Query: 1561 tttctgttcggcgacaagtacgactcggtgatgatcgaccagaaagatctcgacgccatg 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 tttctgttcggcgacaagtacgactcggtgatgatcgaccagaaagatctcgacgccatg 1620
Query: 1621 gcatacctggcgagtttgcccggcgcacgcgacacgttgattggcaacgccaacacggac 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 gcatacctggcgagtttgcccggcgcacgcgacacgttgattggcaacgccaacacggac 1680
Query: 1681 ggcaccgcgtggatgtatgccgtggccggcctacacccgctgtggacccactacgactac 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 ggcaccgcgtggatgtatgccgtggccggcctacacccgctgtggacccactacgactac 1740
Query: 1741 ccgctgcaacagggcccgggctatcaccggttcatcttctgggcctatggccgcaacggg 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 ccgctgcaacagggcccgggctatcaccggttcatcttctgggcctatggccgcaacggg 1800
Query: 1801 gagagcgatcctcgggtactcgaggccatccaagtcctccgtatccgctatatcctgacc 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 gagagcgatcctcgggtactcgaggccatccaagtcctccgtatccgctatatcctgacc 1860
Query: 1861 agcactccgacggtgcgggggtttgccgtgccggacggactagtgtcgttagagacatcg 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 agcactccgacggtgcgggggtttgccgtgccggacggactagtgtcgttagagacatcg 1920
Query: 1921 aggtcgtgggcgaagatctacgacaacggcgaggcccgaatctacgaatggcgcggcact 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 aggtcgtgggcgaagatctacgacaacggcgaggcccgaatctacgaatggcgcggcact 1980
Query: 1981 gccgcagcaacacactcctag 2001
|||||||||||||||||||||
Sbjct: 1981 gccgcagcaacacactcctag 2001
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00099 60513 60250 len=264
(264 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218297.1 [gene=Rv3780] [protein=hypothe... 509 e-145
>lcl|NC_000962.2_cdsid_NP_218297.1 [gene=Rv3780]
[protein=hypothetical protein] [protein_id=NP_218297.1]
[location=4226989..4227525]
Length = 537
Score = 509 bits (257), Expect = e-145
Identities = 257/257 (100%)
Strand = Plus / Minus
Query: 1 atgctggtggcgtggatatcgcgtagccgattgcggctggcttcgtcgagtggggcggcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 atgctggtggcgtggatatcgcgtagccgattgcggctggcttcgtcgagtggggcggcg 198
Query: 61 cgaacctcctcgagcagttgcttgatcatggtgccgatgcgcatcaccttggcgggctgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 cgaacctcctcgagcagttgcttgatcatggtgccgatgcgcatcaccttggcgggctgc 138
Query: 121 tcgaccaggtcggtcagcgacgactcgtcggagtcgttctcctgcaccgctatcagccgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 tcgaccaggtcggtcagcgacgactcgtcggagtcgttctcctgcaccgctatcagccgc 78
Query: 181 gggtcgacgccgccgatgacctcgacgtcgtcgtcgtcgctgccggtactcaatccaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 gggtcgacgccgccgatgacctcgacgtcgtcgtcgtcgctgccggtactcaatccaatc 18
Query: 241 accatcctcttacgcac 257
|||||||||||||||||
Sbjct: 17 accatcctcttacgcac 1
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00102 62695 62543 len=153
(153 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218300.1 [gene=rfbD] [protein=O-antigen... 303 2e-83
>lcl|NC_000962.2_cdsid_NP_218300.1 [gene=rfbD]
[protein=O-antigen/lipopolysaccharide transport integral
membrane protein ABC transporter RfbD]
[protein_id=NP_218300.1] [location=4229258..4230100]
Length = 843
Score = 303 bits (153), Expect = 2e-83
Identities = 153/153 (100%)
Strand = Plus / Minus
Query: 1 gtgatccagaacggccccagcaccgagcggcggtaccgctgcttgatgtcctgccagccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 gtgatccagaacggccccagcaccgagcggcggtaccgctgcttgatgtcctgccagccc 111
Query: 61 aggtgcagccacagctcgtggcggcggaacccgtcgaccagatcgcctcggacgcgggcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 aggtgcagccacagctcgtggcggcggaacccgtcgaccagatcgcctcggacgcgggcc 51
Query: 121 agtgtccgcgactgtgtctggaagctagcttga 153
|||||||||||||||||||||||||||||||||
Sbjct: 50 agtgtccgcgactgtgtctggaagctagcttga 18
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00104 63234 63368 len=135
(135 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218300.1 [gene=rfbD] [protein=O-antigen... 268 9e-73
>lcl|NC_000962.2_cdsid_NP_218300.1 [gene=rfbD]
[protein=O-antigen/lipopolysaccharide transport integral
membrane protein ABC transporter RfbD]
[protein_id=NP_218300.1] [location=4229258..4230100]
Length = 843
Score = 268 bits (135), Expect = 9e-73
Identities = 135/135 (100%)
Strand = Plus / Plus
Query: 1 gtgcgggcgccactgttgggcgctcaccaggagctgcggcactggctggtggtgctggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 gtgcgggcgccactgttgggcgctcaccaggagctgcggcactggctggtggtgctggtg 768
Query: 61 ttgaccgtcgtcggctggatgctggcggcgttcgcgatgcggcagtatcgcgcgcgggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 ttgaccgtcgtcggctggatgctggcggcgttcgcgatgcggcagtatcgcgcgcgggtg 828
Query: 121 ccctactgggtgtag 135
|||||||||||||||
Sbjct: 829 ccctactgggtgtag 843
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00105 63260 63051 len=210
(210 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218300.1 [gene=rfbD] [protein=O-antigen... 416 e-117
>lcl|NC_000962.2_cdsid_NP_218300.1 [gene=rfbD]
[protein=O-antigen/lipopolysaccharide transport integral
membrane protein ABC transporter RfbD]
[protein_id=NP_218300.1] [location=4229258..4230100]
Length = 843
Score = 416 bits (210), Expect = e-117
Identities = 210/210 (100%)
Strand = Plus / Minus
Query: 1 gtgagcgcccaacagtggcgcccgcacgatgtccagatagtgcagcagcgggttgagctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 gtgagcgcccaacagtggcgcccgcacgatgtccagatagtgcagcagcgggttgagctc 676
Query: 61 gacgatgctcgaccagcggcccgcgccctgccgacgcagggtctcgtcgttccagatgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 gacgatgctcgaccagcggcccgcgccctgccgacgcagggtctcgtcgttccagatgat 616
Query: 121 cggcgtcatgaagaacaacaactgcacaacggaaaacagcagcgggccgatgtcgcggta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 cggcgtcatgaagaacaacaactgcacaacggaaaacagcagcgggccgatgtcgcggta 556
Query: 181 gcgggtcgccaggatgccgaaacacagtga 210
||||||||||||||||||||||||||||||
Sbjct: 555 gcgggtcgccaggatgccgaaacacagtga 526
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00109 67444 67644 len=201
(201 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218304.1 [gene=Rv3787c] [protein=hypoth... 398 e-112
lcl|NC_000962.2_cdsid_NP_214795.1 [gene=Rv0281] [protein=hypothe... 56 1e-08
>lcl|NC_000962.2_cdsid_NP_218304.1 [gene=Rv3787c]
[protein=hypothetical protein] [protein_id=NP_218304.1]
[location=complement(4233610..4234536)]
Length = 927
Score = 398 bits (201), Expect = e-112
Identities = 201/201 (100%)
Strand = Plus / Minus
Query: 1 atggcagccggtacccgcgtgcgtcgagccccgacgccaggatcaccgcttgccgaacgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atggcagccggtacccgcgtgcgtcgagccccgacgccaggatcaccgcttgccgaacgc 302
Query: 61 cggcggcggccgcgtccaagaagaactgatcgaagtagcgggtgcgcaccaccaactcgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cggcggcggccgcgtccaagaagaactgatcgaagtagcgggtgcgcaccaccaactcgg 242
Query: 121 tcgtcattcgctgcaagccccaggccgcgtcggggtcgtccacatcggcagcatccagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcgtcattcgctgcaagccccaggccgcgtcggggtcgtccacatcggcagcatccagtt 182
Query: 181 ctccggttgcccatcgggtga 201
|||||||||||||||||||||
Sbjct: 181 ctccggttgcccatcgggtga 161
>lcl|NC_000962.2_cdsid_NP_214795.1 [gene=Rv0281]
[protein=hypothetical protein] [protein_id=NP_214795.1]
[location=340998..341906]
Length = 909
Score = 56.0 bits (28), Expect = 1e-08
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 3 ggcagccggtacccgcgtgcgtcgagccccgacgccaggatcaccgcttgccgaacgccg 62
|||||||||||| |||| | ||| ||||||| ||||||||| ||| | ||||| |||||
Sbjct: 344 ggcagccggtacgcgcgcgagtccagccccgccgccaggatgaccacctgccgcgcgccg 285
Query: 63 gcggcggc 70
||||||||
Sbjct: 284 gcggcggc 277
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00110 67641 67889 len=249
(249 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218304.1 [gene=Rv3787c] [protein=hypoth... 325 9e-90
>lcl|NC_000962.2_cdsid_NP_218304.1 [gene=Rv3787c]
[protein=hypothetical protein] [protein_id=NP_218304.1]
[location=complement(4233610..4234536)]
Length = 927
Score = 325 bits (164), Expect = 9e-90
Identities = 164/164 (100%)
Strand = Plus / Minus
Query: 1 gtgaggaactcgacacccacggcacgaaccaacggttcggcgaacgggtcgtcgatgagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 gtgaggaactcgacacccacggcacgaaccaacggttcggcgaacgggtcgtcgatgagg 105
Query: 61 ggctgggccgccctggccgccctggcccttcccgcggcgaccagcgtggcggtcgcgccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 ggctgggccgccctggccgccctggcccttcccgcggcgaccagcgtggcggtcgcgccg 45
Query: 121 acaccggtggctaggtcccagctatcgtcgtcggtacgcgccac 164
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 acaccggtggctaggtcccagctatcgtcgtcggtacgcgccac 1
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00111 68838 68692 len=147
(147 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218306.1 [gene=Rv3789] [protein=hypothe... 291 7e-80
>lcl|NC_000962.2_cdsid_NP_218306.1 [gene=Rv3789]
[protein=hypothetical protein] [protein_id=NP_218306.1]
[location=4235374..4235739]
Length = 366
Score = 291 bits (147), Expect = 7e-80
Identities = 147/147 (100%)
Strand = Plus / Minus
Query: 1 atgaccgcgacgaatcgggccgtgctgggctcggcctggaatgtccaccggcggttgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 atgaccgcgacgaatcgggccgtgctgggctcggcctggaatgtccaccggcggttgatc 138
Query: 61 aggtacgcggtgatggtgccgacgatgaagctgatggccttggacaggtcgacctgtagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 aggtacgcggtgatggtgccgacgatgaagctgatggccttggacaggtcgacctgtagg 78
Query: 121 cccgccaccttgtacagcacgacgtag 147
|||||||||||||||||||||||||||
Sbjct: 77 cccgccaccttgtacagcacgacgtag 51
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00115 69047 70432 len=1386
(1386 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218307.1 [gene=Rv3790] [protein=oxidore... 2748 0.0
>lcl|NC_000962.2_cdsid_NP_218307.1 [gene=Rv3790]
[protein=oxidoreductase] [protein_id=NP_218307.1]
[location=4235779..4237164]
Length = 1386
Score = 2748 bits (1386), Expect = 0.0
Identities = 1386/1386 (100%)
Strand = Plus / Plus
Query: 1 atgttgagcgtgggagctaccactaccgccacccggctgaccgggtggggccgcacagcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgttgagcgtgggagctaccactaccgccacccggctgaccgggtggggccgcacagcg 60
Query: 61 ccgtcggtggcgaatgtgcttcgcaccccagatgccgagatgatcgtcaaggcggtggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccgtcggtggcgaatgtgcttcgcaccccagatgccgagatgatcgtcaaggcggtggct 120
Query: 121 cgggtcgccgagtcggggggcggccggggtgctatcgcgcgcgggctgggccgctcctat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgggtcgccgagtcggggggcggccggggtgctatcgcgcgcgggctgggccgctcctat 180
Query: 181 ggggacaacgcccaaaacggcggtgggttggtgatcgacatgacgccgctgaacactatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggggacaacgcccaaaacggcggtgggttggtgatcgacatgacgccgctgaacactatc 240
Query: 241 cactccattgacgccgacaccaagctggtcgacatcgacgccggggtcaacctcgaccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cactccattgacgccgacaccaagctggtcgacatcgacgccggggtcaacctcgaccaa 300
Query: 301 ctgatgaaagccgccctgccgttcgggctgtgggtcccggtgctgccgggaacccggcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctgatgaaagccgccctgccgttcgggctgtgggtcccggtgctgccgggaacccggcag 360
Query: 361 gtcaccgtcggcggggcgatcgcctgcgatatccacggcaagaaccatcacagcgctggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtcaccgtcggcggggcgatcgcctgcgatatccacggcaagaaccatcacagcgctggc 420
Query: 421 agcttcggtaaccacgtgcgcagcatggacctgctgaccgccgacggcgagatccgtcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agcttcggtaaccacgtgcgcagcatggacctgctgaccgccgacggcgagatccgtcat 480
Query: 481 ctcactccgaccggcgaggacgccgaactgttctgggccaccgtcgggggcaacggtctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctcactccgaccggcgaggacgccgaactgttctgggccaccgtcgggggcaacggtctc 540
Query: 541 accggcatcatcatgcgggccaccatcgagatgacgcccacttcgacggcgtacttcatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 accggcatcatcatgcgggccaccatcgagatgacgcccacttcgacggcgtacttcatc 600
Query: 601 gccgacggcgacgtcaccgccagcctcgacgagaccatcgccctgcacagcgacggcagc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gccgacggcgacgtcaccgccagcctcgacgagaccatcgccctgcacagcgacggcagc 660
Query: 661 gaagcgcgctacacctattccagtgcctggttcgacgcgatcagcgctcccccgaagctg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gaagcgcgctacacctattccagtgcctggttcgacgcgatcagcgctcccccgaagctg 720
Query: 721 ggccgcgcggcggtatcgcgtggccgcctggccaccgtcgagcaattgcctgcgaaactg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ggccgcgcggcggtatcgcgtggccgcctggccaccgtcgagcaattgcctgcgaaactg 780
Query: 781 cggagcgaacctttgaaattcgatgcgccacagctacttacgttgcccgacgtgtttccc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 cggagcgaacctttgaaattcgatgcgccacagctacttacgttgcccgacgtgtttccc 840
Query: 841 aacgggctggccaacaaatataccttcggcccgatcggcgaactgtggtaccgcaaatcc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 aacgggctggccaacaaatataccttcggcccgatcggcgaactgtggtaccgcaaatcc 900
Query: 901 ggcacctatcgcggcaaggtccagaacctcacgcagttctaccatccgctggacatgttc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ggcacctatcgcggcaaggtccagaacctcacgcagttctaccatccgctggacatgttc 960
Query: 961 ggcgaatggaaccgcgcctacggcccagcgggcttcctgcaatatcagttcgtgatcccc 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ggcgaatggaaccgcgcctacggcccagcgggcttcctgcaatatcagttcgtgatcccc 1020
Query: 1021 acagaggcggttgatgagttcaagaagatcatcggcgttattcaagcctcgggtcactac 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 acagaggcggttgatgagttcaagaagatcatcggcgttattcaagcctcgggtcactac 1080
Query: 1081 tcgtttctcaacgtgttcaagctgttcggcccccgcaaccaggcgccgctcagcttcccc 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 tcgtttctcaacgtgttcaagctgttcggcccccgcaaccaggcgccgctcagcttcccc 1140
Query: 1141 atcccgggctggaacatctgcgtcgacttccccatcaaggacgggctggggaagttcgtc 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 atcccgggctggaacatctgcgtcgacttccccatcaaggacgggctggggaagttcgtc 1200
Query: 1201 agcgaactcgaccgccgggtactggaattcggcggccggctctacaccgccaaagactcc 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 agcgaactcgaccgccgggtactggaattcggcggccggctctacaccgccaaagactcc 1260
Query: 1261 cgtaccaccgccgaaacctttcatgccatgtatccgcgcgtcgacgaatggatctccgtg 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 cgtaccaccgccgaaacctttcatgccatgtatccgcgcgtcgacgaatggatctccgtg 1320
Query: 1321 cgccgcaaggtcgatccgctgcgcgtattcgcctccgacatggcccgacgcttggagctg 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 cgccgcaaggtcgatccgctgcgcgtattcgcctccgacatggcccgacgcttggagctg 1380
Query: 1381 ctgtag 1386
||||||
Sbjct: 1381 ctgtag 1386
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00117 71084 71197 len=114
(114 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218308.1 [gene=Rv3791] [protein=short-c... 226 3e-60
>lcl|NC_000962.2_cdsid_NP_218308.1 [gene=Rv3791]
[protein=short-chain dehydrogenase]
[protein_id=NP_218308.1] [location=4237165..4237929]
Length = 765
Score = 226 bits (114), Expect = 3e-60
Identities = 114/114 (100%)
Strand = Plus / Plus
Query: 1 gtgaccgcgtccgcaaaaggtaaggaattggtttgggcgccagcagcgttccgctacgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 gtgaccgcgtccgcaaaaggtaaggaattggtttgggcgccagcagcgttccgctacgtc 711
Query: 61 atgatggtgttgcgtcacatcccgcggagcatcttccgcaagctgcccatctga 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 atgatggtgttgcgtcacatcccgcggagcatcttccgcaagctgcccatctga 765
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00122 71200 73131 len=1932
(1932 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218309.1 [gene=Rv3792] [protein=transme... 3830 0.0
>lcl|NC_000962.2_cdsid_NP_218309.1 [gene=Rv3792]
[protein=transmembrane protein] [protein_id=NP_218309.1]
[location=4237932..4239863]
Length = 1932
Score = 3830 bits (1932), Expect = 0.0
Identities = 1932/1932 (100%)
Strand = Plus / Plus
Query: 1 atgccgagcagacgcaaaagcccccaattcgggcacgaaatgggggcttttacgtctgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgccgagcagacgcaaaagcccccaattcgggcacgaaatgggggcttttacgtctgct 60
Query: 61 cgcgcccgggaggtgctggtcgctcttggccagctggcagcggcggtggtagtggccgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgcgcccgggaggtgctggtcgctcttggccagctggcagcggcggtggtagtggccgtc 120
Query: 121 ggtgtcgcggtggtgtccctgctcgccattgcgcgggtggagtggcccgccttcccgtcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggtgtcgcggtggtgtccctgctcgccattgcgcgggtggagtggcccgccttcccgtcg 180
Query: 181 tccaaccagctgcatgcgctgaccaccgtcggccaggtcggctgcctggccgggctggtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tccaaccagctgcatgcgctgaccaccgtcggccaggtcggctgcctggccgggctggtc 240
Query: 241 ggcatcggctggttgtggcggcacggtcgattccggcgactggcccggctgggcgggctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggcatcggctggttgtggcggcacggtcgattccggcgactggcccggctgggcgggctg 300
Query: 301 gttttggtatccgcgtttaccgtcgtgacgctgggcatgccgctgggcgccaccaagctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gttttggtatccgcgtttaccgtcgtgacgctgggcatgccgctgggcgccaccaagctg 360
Query: 361 tatctgttcggcatctctgtcgaccagcagttccgcaccgaatacctcacccggctcacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tatctgttcggcatctctgtcgaccagcagttccgcaccgaatacctcacccggctcacc 420
Query: 421 gacaccgccgccctgcgcgacatgacctacatcggactgccaccgttttacccaccgggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gacaccgccgccctgcgcgacatgacctacatcggactgccaccgttttacccaccgggc 480
Query: 481 tggttctggatcggcggacgcgcggcggcgctgaccgggacgccggcctgggagatgttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tggttctggatcggcggacgcgcggcggcgctgaccgggacgccggcctgggagatgttc 540
Query: 541 aagccgtgggcgatcacctcgatggccattgcggtggccgtcgcgctggtgctgtggtgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aagccgtgggcgatcacctcgatggccattgcggtggccgtcgcgctggtgctgtggtgg 600
Query: 601 cggatgatccgcttcgaatacgccttgctggtcaccgtcgccacagcggcggtgatgctg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cggatgatccgcttcgaatacgccttgctggtcaccgtcgccacagcggcggtgatgctg 660
Query: 661 gcctacagctcgccggagccctacgccgcgatgatcacggtgttgttgccgccgatgctc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gcctacagctcgccggagccctacgccgcgatgatcacggtgttgttgccgccgatgctc 720
Query: 721 gtactgacctggtcgggcctgggcgcgcgcgaccgtcagggctgggccgcggtggtcggt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtactgacctggtcgggcctgggcgcgcgcgaccgtcagggctgggccgcggtggtcggt 780
Query: 781 gccggcgtcttcctgggcttcgcggccacctggtacaccctgttggtcgcctacggcgcg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gccggcgtcttcctgggcttcgcggccacctggtacaccctgttggtcgcctacggcgcg 840
Query: 841 ttcacggtggtgctgatggcgctgctgctggccgggtcgcggctgcaatccggaatcaag 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ttcacggtggtgctgatggcgctgctgctggccgggtcgcggctgcaatccggaatcaag 900
Query: 901 gcggcggtagacccgctgtgccggcttgccgtcgtcggcgcgatcgcggccgccatcgga 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gcggcggtagacccgctgtgccggcttgccgtcgtcggcgcgatcgcggccgccatcgga 960
Query: 961 tccaccacctggctgccctacctgctgcgggcggcccgcgacccggtcagcgacaccggc 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 tccaccacctggctgccctacctgctgcgggcggcccgcgacccggtcagcgacaccggc 1020
Query: 1021 agcgcccagcactacctacccgcagacggcgccgcactgaccttccccatgctgcagttc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 agcgcccagcactacctacccgcagacggcgccgcactgaccttccccatgctgcagttc 1080
Query: 1081 tccctgctgggcgcgatctgtctgctgggcacgctgtggctggtgatgcgcgcgcgatca 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 tccctgctgggcgcgatctgtctgctgggcacgctgtggctggtgatgcgcgcgcgatca 1140
Query: 1141 tcggcgccagccggcgccctggccatcggcgtgctggccgtctacctgtggtccctgctg 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 tcggcgccagccggcgccctggccatcggcgtgctggccgtctacctgtggtccctgctg 1200
Query: 1201 tcgatgctggccacattggcgcgcaccacactgctgtcgtttcgcctgcagccgacgctg 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 tcgatgctggccacattggcgcgcaccacactgctgtcgtttcgcctgcagccgacgctg 1260
Query: 1261 agcgtgctgctggtggcggccggtgcgttcggcttcgtcgaagcggtccaagcccttggc 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 agcgtgctgctggtggcggccggtgcgttcggcttcgtcgaagcggtccaagcccttggc 1320
Query: 1321 aaacggggtcgcggtgtcattccgatggccgccgccatcgggttggccggcgcgatcgcg 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 aaacggggtcgcggtgtcattccgatggccgccgccatcgggttggccggcgcgatcgcg 1380
Query: 1381 ttcagccaggacatccccgacgtgttgcggccggacctgaccatcgcctacaccgacacc 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 ttcagccaggacatccccgacgtgttgcggccggacctgaccatcgcctacaccgacacc 1440
Query: 1441 gacggctacggccagcgcggcgaccggcgaccgcccggctccgagaagtactacccagcc 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 gacggctacggccagcgcggcgaccggcgaccgcccggctccgagaagtactacccagcc 1500
Query: 1501 atcgatgccgccatccggcgcgtcaccggcaagcgccgcgatcggaccgtcgtgttgacc 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 atcgatgccgccatccggcgcgtcaccggcaagcgccgcgatcggaccgtcgtgttgacc 1560
Query: 1561 gccgactacagcttcctgtcgtactacccctactggggctttcaggggttgacgccgcac 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 gccgactacagcttcctgtcgtactacccctactggggctttcaggggttgacgccgcac 1620
Query: 1621 tacgccaacccgctggcacagttcgacaagcgcgccacacagatcgacagctggtcggga 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 tacgccaacccgctggcacagttcgacaagcgcgccacacagatcgacagctggtcggga 1680
Query: 1681 ctctccaccgccgacgagttcatcgccgcgctggacaagctgccctggcagccgccgacc 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 ctctccaccgccgacgagttcatcgccgcgctggacaagctgccctggcagccgccgacc 1740
Query: 1741 gtcttcctcatgcgccacggcgcacataacagctacaccctgcggctggcccaggacgtc 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 gtcttcctcatgcgccacggcgcacataacagctacaccctgcggctggcccaggacgtc 1800
Query: 1801 taccccaaccagcccaatgttcgccgctacacggtggacctacggaccgccctcttcgcc 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 taccccaaccagcccaatgttcgccgctacacggtggacctacggaccgccctcttcgcc 1860
Query: 1861 gacccgcgtttcgtcgtcgaggacattggcccgttcgtgctggccatccgcaagccgcag 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 gacccgcgtttcgtcgtcgaggacattggcccgttcgtgctggccatccgcaagccgcag 1920
Query: 1921 gagagcgcgtga 1932
||||||||||||
Sbjct: 1921 gagagcgcgtga 1932
Score = 67.9 bits (34), Expect = 3e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 5 cgagcagacgcaaaagcccccaattcgggcacgaaatgggggcttttacgtctgctcg 62
|||||||||| ||||||||||| |||| || |||| ||||||||||| ||||||||||
Sbjct: 62 cgagcagacgtaaaagcccccatttcgtgcccgaattgggggcttttgcgtctgctcg 5
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00130 73131 76415 len=3285
(3285 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218310.1 [gene=embC] [protein=indolylac... 6512 0.0
lcl|NC_000962.2_cdsid_NP_218312.1 [gene=embB] [protein=indolylac... 90 1e-17
>lcl|NC_000962.2_cdsid_NP_218310.1 [gene=embC]
[protein=indolylacetylinositol arabinosyltransferase]
[protein_id=NP_218310.1] [location=4239863..4243147]
Length = 3285
Score = 6512 bits (3285), Expect = 0.0
Identities = 3285/3285 (100%)
Strand = Plus / Plus
Query: 1 atggctaccgaagccgccccaccccgtatcgccgtccggctaccatctacctccgtgcgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggctaccgaagccgccccaccccgtatcgccgtccggctaccatctacctccgtgcgc 60
Query: 61 gacgcgggagcaaactaccggatcgcccggtacgtcgctgtggtggcgggtctgctaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gacgcgggagcaaactaccggatcgcccggtacgtcgctgtggtggcgggtctgctaggc 120
Query: 121 gctgtgctggccatcgccaccccactgctgccggtcaaccagaccaccgcgcaattgaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctgtgctggccatcgccaccccactgctgccggtcaaccagaccaccgcgcaattgaac 180
Query: 181 tggccccaaaacggcacgttcgccagtgtcgaggcaccgctgattggctacgtggccacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggccccaaaacggcacgttcgccagtgtcgaggcaccgctgattggctacgtggccacc 240
Query: 241 gacttgaacatcaccgtcccctgccaggccgccgccggactggccggatcgcagaacacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gacttgaacatcaccgtcccctgccaggccgccgccggactggccggatcgcagaacacc 300
Query: 301 ggcaagacggtgttgttgtcaacggtgcccaagcaggcgcctaaggccgtcgatcgcggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggcaagacggtgttgttgtcaacggtgcccaagcaggcgcctaaggccgtcgatcgcggg 360
Query: 361 ctgctgctgcaacgggccaacgacgacctggtgcttgtggtgcgtaatgtcccgttggtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctgctgctgcaacgggccaacgacgacctggtgcttgtggtgcgtaatgtcccgttggtc 420
Query: 421 accgccccgctgagtcaggtgctcggcccgacctgtcagcggttgacattcaccgcgcac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 accgccccgctgagtcaggtgctcggcccgacctgtcagcggttgacattcaccgcgcac 480
Query: 481 gccgatcgggtcgccgccgaattcgtcggactggtgcagggacccaatgctgagcacccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gccgatcgggtcgccgccgaattcgtcggactggtgcagggacccaatgctgagcacccc 540
Query: 541 ggtgcaccgctgcgcggtgagcgcagcggctacgacttccgcccgcagatcgtcggggtg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggtgcaccgctgcgcggtgagcgcagcggctacgacttccgcccgcagatcgtcggggtg 600
Query: 601 ttcaccgacctggccgggccggcgccaccgggtctgagcttctcggcgagcgtggatacc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttcaccgacctggccgggccggcgccaccgggtctgagcttctcggcgagcgtggatacc 660
Query: 661 cgctacagcagcagccccacgccgctgaagatggccgccatgatcctcggggtagcgctc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgctacagcagcagccccacgccgctgaagatggccgccatgatcctcggggtagcgctc 720
Query: 721 accggcgccgccctggtggcgctgcacatcctggacaccgccgacggcatgcggcaccgg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 accggcgccgccctggtggcgctgcacatcctggacaccgccgacggcatgcggcaccgg 780
Query: 781 cggttcctgcccgcgcgctggtggtcgaccggcggtctggacaccctggttatcgccgtg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 cggttcctgcccgcgcgctggtggtcgaccggcggtctggacaccctggttatcgccgtg 840
Query: 841 ctggtgtggtggcatttcgtcggggccaacacctccgacgacggctacatcctgaccatg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ctggtgtggtggcatttcgtcggggccaacacctccgacgacggctacatcctgaccatg 900
Query: 901 gcccgggtgtccgagcatgcgggctatatggccaactactaccgctggttcggcacaccc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gcccgggtgtccgagcatgcgggctatatggccaactactaccgctggttcggcacaccc 960
Query: 961 gaggcgcctttcggctggtactacgacctgctggcgctgtgggctcatgtcagcacggcc 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gaggcgcctttcggctggtactacgacctgctggcgctgtgggctcatgtcagcacggcc 1020
Query: 1021 agtatctggatgcgcctacccaccctggcgatggcgctcacctgctggtgggtaatcagc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 agtatctggatgcgcctacccaccctggcgatggcgctcacctgctggtgggtaatcagc 1080
Query: 1081 cgtgaggtcattccccggctggggcacgccgtcaagacgagccgggcagcggcgtggacg 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 cgtgaggtcattccccggctggggcacgccgtcaagacgagccgggcagcggcgtggacg 1140
Query: 1141 gcggcgggcatgtttctggctgtctggctgccgctggacaacggccttcggcccgagccg 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gcggcgggcatgtttctggctgtctggctgccgctggacaacggccttcggcccgagccg 1200
Query: 1201 atcatcgccctgggcatcctgctgacctggtgctcggtggagcgggcggtggccaccagc 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 atcatcgccctgggcatcctgctgacctggtgctcggtggagcgggcggtggccaccagc 1260
Query: 1261 cggctgctgccggtggcaatcgcctgcatcatcggtgccttgaccctgttctccgggccg 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 cggctgctgccggtggcaatcgcctgcatcatcggtgccttgaccctgttctccgggccg 1320
Query: 1321 acgggcatcgcctcgatcggtgcgctgctggtcgcgatcgggccgctacggaccatcctg 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 acgggcatcgcctcgatcggtgcgctgctggtcgcgatcgggccgctacggaccatcctg 1380
Query: 1381 caccggcgttccaggcggttcggcgtgctaccactggtggcgccgatcctggccgcggcc 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 caccggcgttccaggcggttcggcgtgctaccactggtggcgccgatcctggccgcggcc 1440
Query: 1441 accgtcaccgcgatcccgatctttcgtgatcagaccttcgcgggcgagatccaggccaac 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 accgtcaccgcgatcccgatctttcgtgatcagaccttcgcgggcgagatccaggccaac 1500
Query: 1501 ctcctcaagcgtgccgtagggcccagcctgaagtggttcgacgaacacatccgctacgag 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 ctcctcaagcgtgccgtagggcccagcctgaagtggttcgacgaacacatccgctacgag 1560
Query: 1561 cggctgttcatggccagccccgacggctcgatcgcccgccgcttcgccgtgctggccttg 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 cggctgttcatggccagccccgacggctcgatcgcccgccgcttcgccgtgctggccttg 1620
Query: 1621 gtgctggcgctcgcggtatcggtggcaatgtcgttacgtaagggccgcattccaggtacc 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 gtgctggcgctcgcggtatcggtggcaatgtcgttacgtaagggccgcattccaggtacc 1680
Query: 1681 gctgctggaccgagccgccgcatcatcggcatcacgatcatttccttcctcgcgatgatg 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 gctgctggaccgagccgccgcatcatcggcatcacgatcatttccttcctcgcgatgatg 1740
Query: 1741 ttcaccccgacaaagtggacccatcacttcggggtgttcgcggggttggccgggtcgctg 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 ttcaccccgacaaagtggacccatcacttcggggtgttcgcggggttggccgggtcgctg 1800
Query: 1801 ggggcgcttgccgcggtcgcggtgacgggcgctgcgatgcgctcgcggcggaaccggacc 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 ggggcgcttgccgcggtcgcggtgacgggcgctgcgatgcgctcgcggcggaaccggacc 1860
Query: 1861 gtgttcgccgccgtggtggtcttcgtgttggccctgtcgttcgccagtgtcaacggctgg 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 gtgttcgccgccgtggtggtcttcgtgttggccctgtcgttcgccagtgtcaacggctgg 1920
Query: 1921 tggtacgtgtccaacttcggtgtgccatggtcgaactcgtttccgaagtggcgatggtcg 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 tggtacgtgtccaacttcggtgtgccatggtcgaactcgtttccgaagtggcgatggtcg 1980
Query: 1981 cttaccaccgcactcctcgagctgacggtgctggtgctgctgctagcggcatggttccac 2040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1981 cttaccaccgcactcctcgagctgacggtgctggtgctgctgctagcggcatggttccac 2040
Query: 2041 ttcgtcgccaacggtgacgggcgccgaacagccaggccaacccggtttagggcacgacta 2100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2041 ttcgtcgccaacggtgacgggcgccgaacagccaggccaacccggtttagggcacgacta 2100
Query: 2101 gccggaattgtccagtccccgttggcaattgccacgtggttgctggtgcttttcgaggtg 2160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2101 gccggaattgtccagtccccgttggcaattgccacgtggttgctggtgcttttcgaggtg 2160
Query: 2161 gtatcgctgacccaggcgatgatttcccagtacccggcgtggtcggttggccggtctaac 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2161 gtatcgctgacccaggcgatgatttcccagtacccggcgtggtcggttggccggtctaac 2220
Query: 2221 ctacaggctttggccggcaagacctgcgggctggccgaagacgtgctggtggagctggat 2280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2221 ctacaggctttggccggcaagacctgcgggctggccgaagacgtgctggtggagctggat 2280
Query: 2281 cccaacgcaggcatgctggcgccggtgaccgcgccgttggccgacgccctgggagccggc 2340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2281 cccaacgcaggcatgctggcgccggtgaccgcgccgttggccgacgccctgggagccggc 2340
Query: 2341 ctgtctgaagccttcacacccaacggcattcccgccgacgtcaccgccgacccggtgatg 2400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2341 ctgtctgaagccttcacacccaacggcattcccgccgacgtcaccgccgacccggtgatg 2400
Query: 2401 gaacgtccaggggatcgcagtttcctcaacgacgacgggctgatcaccggcagcgaaccc 2460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2401 gaacgtccaggggatcgcagtttcctcaacgacgacgggctgatcaccggcagcgaaccc 2460
Query: 2461 ggcaccgaagggggcaccacggccgcaccgggaatcaacggctcccgcgcccggctgccc 2520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2461 ggcaccgaagggggcaccacggccgcaccgggaatcaacggctcccgcgcccggctgccc 2520
Query: 2521 tacaacctggacccggcccgtacaccggtgctgggcagctggcgagccggcgtgcaggtg 2580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2521 tacaacctggacccggcccgtacaccggtgctgggcagctggcgagccggcgtgcaggtg 2580
Query: 2581 cccgccatgctgcggtcgggctggtaccggctgcccaccaacgagcagcgggacagggcg 2640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2581 cccgccatgctgcggtcgggctggtaccggctgcccaccaacgagcagcgggacagggcg 2640
Query: 2641 ccgctgctggtggtgacggcggccgggcgattcgactcccgcgaggtccggttgcagtgg 2700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2641 ccgctgctggtggtgacggcggccgggcgattcgactcccgcgaggtccggttgcagtgg 2700
Query: 2701 gccaccgacgagcaagcggccgccggacaccacggtgggtcgatggaattcgccgacgtc 2760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2701 gccaccgacgagcaagcggccgccggacaccacggtgggtcgatggaattcgccgacgtc 2760
Query: 2761 ggtgccgcgccggcctggcgcaacctgcgcgcaccactgtccgccatcccgagcaccgcc 2820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2761 ggtgccgcgccggcctggcgcaacctgcgcgcaccactgtccgccatcccgagcaccgcc 2820
Query: 2821 acccaggtccggttggtcgccgacgaccaggatctggcgccgcagcactggatcgccctc 2880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2821 acccaggtccggttggtcgccgacgaccaggatctggcgccgcagcactggatcgccctc 2880
Query: 2881 acaccaccgcggattccgcgggtgcgcacgctgcagaacgtggtgggcgcagcggatccg 2940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2881 acaccaccgcggattccgcgggtgcgcacgctgcagaacgtggtgggcgcagcggatccg 2940
Query: 2941 gtgttcctggactggctggtggggctggcattcccctgccaacgcccgttcggccaccaa 3000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2941 gtgttcctggactggctggtggggctggcattcccctgccaacgcccgttcggccaccaa 3000
Query: 3001 tacggcgtcgacgagacacccaagtggcggatcctgccggaccggttcggcgccgaagcc 3060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3001 tacggcgtcgacgagacacccaagtggcggatcctgccggaccggttcggcgccgaagcc 3060
Query: 3061 aactcaccggtgatggatcacaatggcggtggcccgctgggcatcaccgagctgctgatg 3120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3061 aactcaccggtgatggatcacaatggcggtggcccgctgggcatcaccgagctgctgatg 3120
Query: 3121 cgcgcaaccacggtggccagctacctcaaagacgactggtttagggactggggcgcgtta 3180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3121 cgcgcaaccacggtggccagctacctcaaagacgactggtttagggactggggcgcgtta 3180
Query: 3181 cagcggttgacgccttactaccccgacgcccagcccgctgatctgaacctaggaacggtg 3240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3181 cagcggttgacgccttactaccccgacgcccagcccgctgatctgaacctaggaacggtg 3240
Query: 3241 actcgcagcgggctgtggagtccggcgccgttgcgccgcggctag 3285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3241 actcgcagcgggctgtggagtccggcgccgttgcgccgcggctag 3285
>lcl|NC_000962.2_cdsid_NP_218312.1 [gene=embB]
[protein=indolylacetylinositol arabinosyltransferase]
[protein_id=NP_218312.1] [location=4246514..4249810]
Length = 3297
Score = 89.7 bits (45), Expect = 1e-17
Identities = 132/161 (81%)
Strand = Plus / Plus
Query: 877 gacgacggctacatcctgaccatggcccgggtgtccgagcatgcgggctatatggccaac 936
|||||||||||||||||| ||||||||| || |||| || || ||||| ||| |||||
Sbjct: 895 gacgacggctacatcctgggcatggcccgagtcgccgaccacgccggctacatgtccaac 954
Query: 937 tactaccgctggttcggcacacccgaggcgcctttcggctggtactacgacctgctggcg 996
|| | |||||||||||||| || |||| || ||||||||||| ||| |||||||||||
Sbjct: 955 tatttccgctggttcggcagcccggaggatcccttcggctggtattacaacctgctggcg 1014
Query: 997 ctgtgggctcatgtcagcacggccagtatctggatgcgcct 1037
||| | | ||||||||| |||||| | |||||||||||
Sbjct: 1015 ctgatgacccatgtcagcgacgccagtctgtggatgcgcct 1055
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 580 cgcccgcagatcgtcggggtgttcaccgacctggccgggccggcgcc 626
||||||||||| ||||||||||||||||||||| ||||||| |||||
Sbjct: 544 cgcccgcagattgtcggggtgttcaccgacctgaccgggcccgcgcc 590
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00138 76501 79785 len=3285
(3285 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218311.1 [gene=embA] [protein=indolylac... 6512 0.0
>lcl|NC_000962.2_cdsid_NP_218311.1 [gene=embA]
[protein=indolylacetylinositol arabinosyltransferase]
[protein_id=NP_218311.1] [location=4243233..4246517]
Length = 3285
Score = 6512 bits (3285), Expect = 0.0
Identities = 3285/3285 (100%)
Strand = Plus / Plus
Query: 1 gtgccccacgacggtaatgagcgatctcaccggatcgcacgcctagcagccgtcgtctcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgccccacgacggtaatgagcgatctcaccggatcgcacgcctagcagccgtcgtctcg 60
Query: 61 ggaatcgcgggtctgctgctgtgcggcatcgttccgctgcttccggtgaaccaaaccacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggaatcgcgggtctgctgctgtgcggcatcgttccgctgcttccggtgaaccaaaccacc 120
Query: 121 gcgaccatcttctggccgcagggcagcaccgccgacggcaacatcacccagatcaccgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcgaccatcttctggccgcagggcagcaccgccgacggcaacatcacccagatcaccgcc 180
Query: 181 cctctggtatccggggcgccacgcgcgctggacatctcgatcccctgctcggccatcgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cctctggtatccggggcgccacgcgcgctggacatctcgatcccctgctcggccatcgcc 240
Query: 241 acgctgcccgccaacggcggcctggtgctgtccacactgccggccggtggcgtggatacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acgctgcccgccaacggcggcctggtgctgtccacactgccggccggtggcgtggatacc 300
Query: 301 ggtaaggccgggctgttcgtccgcgccaaccaggacacggtcgtcgtggcgttccgcgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggtaaggccgggctgttcgtccgcgccaaccaggacacggtcgtcgtggcgttccgcgac 360
Query: 361 tcggtggccgcggtggcggcccgctccacgatcgcagcgggaggctgtagcgcgctgcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcggtggccgcggtggcggcccgctccacgatcgcagcgggaggctgtagcgcgctgcat 420
Query: 421 atctgggccgataccggcggcgcgggcgctgattttatgggtatacccggcggcgccggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atctgggccgataccggcggcgcgggcgctgattttatgggtatacccggcggcgccggg 480
Query: 481 accctgccgccggagaagaagccacaggttggcggcatcttcaccgacctgaaggtcgga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 accctgccgccggagaagaagccacaggttggcggcatcttcaccgacctgaaggtcgga 540
Query: 541 gcgcagcccgggctgtcggcccgcgtcgacatcgacactcggtttatcacgacgcccggc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gcgcagcccgggctgtcggcccgcgtcgacatcgacactcggtttatcacgacgcccggc 600
Query: 601 gcgctcaagaaggccgtgatgctcctcggcgtgctggcggtcctggtagccatggtgggg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gcgctcaagaaggccgtgatgctcctcggcgtgctggcggtcctggtagccatggtgggg 660
Query: 661 ctggccgcgctggaccggctcagcaggggccgcaccctgcgcgactggctgacccgatat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ctggccgcgctggaccggctcagcaggggccgcaccctgcgcgactggctgacccgatat 720
Query: 721 cgcccgcgggtgcgggtcggattcgccagccggctcgctgacgcagcggtgatcgcgacc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cgcccgcgggtgcgggtcggattcgccagccggctcgctgacgcagcggtgatcgcgacc 780
Query: 781 ttgttgctctggcatgtcatcggcgccacctcgtccgatgacggctaccttctgaccgtc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ttgttgctctggcatgtcatcggcgccacctcgtccgatgacggctaccttctgaccgtc 840
Query: 841 gcccgggtcgccccgaaggccggctatgtagccaactactaccggtatttcggcacgacg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gcccgggtcgccccgaaggccggctatgtagccaactactaccggtatttcggcacgacg 900
Query: 901 gaggcgccgttcgactggtatacatcggtgcttgcccagctggcggcggtgagcaccgcc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gaggcgccgttcgactggtatacatcggtgcttgcccagctggcggcggtgagcaccgcc 960
Query: 961 ggcgtctggatgcgcctgcccgccaccctggccggaatcgcctgctggctgatcgtcagc 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ggcgtctggatgcgcctgcccgccaccctggccggaatcgcctgctggctgatcgtcagc 1020
Query: 1021 cgtttcgtgctgcggcggctgggaccgggcccgggcgggctggcgtccaaccgggtcgct 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 cgtttcgtgctgcggcggctgggaccgggcccgggcgggctggcgtccaaccgggtcgct 1080
Query: 1081 gtgttcaccgctggtgcggtgttcctgtccgcctggctgccgttcaacaacggcctgcgt 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gtgttcaccgctggtgcggtgttcctgtccgcctggctgccgttcaacaacggcctgcgt 1140
Query: 1141 cccgagccgctgatcgcgctgggtgtgctggtcacgtgggtgttggtggaacggtcgatc 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 cccgagccgctgatcgcgctgggtgtgctggtcacgtgggtgttggtggaacggtcgatc 1200
Query: 1201 gcgctcggacggctggccccggccgcggtagccatcatcgtggcgacgcttaccgcgacg 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 gcgctcggacggctggccccggccgcggtagccatcatcgtggcgacgcttaccgcgacg 1260
Query: 1261 ctggcaccgcaggggttgatcgcgctggccccgctgctgactggtgcgcgcgccatcgcc 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 ctggcaccgcaggggttgatcgcgctggccccgctgctgactggtgcgcgcgccatcgcc 1320
Query: 1321 cagaggatccggcgccgccgggcgaccgatggactgctggcgccgctggcggtgctggcc 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 cagaggatccggcgccgccgggcgaccgatggactgctggcgccgctggcggtgctggcc 1380
Query: 1381 gcggcgttgtcgctgatcaccgtggtggtgtttcgggaccagacgctggccacggtggcc 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 gcggcgttgtcgctgatcaccgtggtggtgtttcgggaccagacgctggccacggtggcc 1440
Query: 1441 gaatcggcacgcatcaagtacaaggtcggcccgaccatcgcctggtaccaggacttcctg 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 gaatcggcacgcatcaagtacaaggtcggcccgaccatcgcctggtaccaggacttcctg 1500
Query: 1501 cgctactacttccttaccgtggagagcaacgttgaggggtcgatgtcccgccggttcgcg 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 cgctactacttccttaccgtggagagcaacgttgaggggtcgatgtcccgccggttcgcg 1560
Query: 1561 gtgctggtgttgctgttctgcctgttcggggtgctgttcgtgctgctgcggcgcggccgg 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 gtgctggtgttgctgttctgcctgttcggggtgctgttcgtgctgctgcggcgcggccgg 1620
Query: 1621 gtggcggggctggccagcggcccggcctggcgactgatcggcactacggcggtcggcctg 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 gtggcggggctggccagcggcccggcctggcgactgatcggcactacggcggtcggcctg 1680
Query: 1681 ctgctgctcacgttcacgccaaccaagtgggccgtgcagttcggcgcattcgccgggctg 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 ctgctgctcacgttcacgccaaccaagtgggccgtgcagttcggcgcattcgccgggctg 1740
Query: 1741 gccggggtgttgggtgcggtcaccgcgttcacctttgcccgcatcggtctacatagtcga 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 gccggggtgttgggtgcggtcaccgcgttcacctttgcccgcatcggtctacatagtcga 1800
Query: 1801 cgcaacctcacgctgtacgtgaccgcgttgctgttcgtgctggcgtgggcaacctcgggc 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 cgcaacctcacgctgtacgtgaccgcgttgctgttcgtgctggcgtgggcaacctcgggc 1860
Query: 1861 atcaacgggtggttctacgtcggcaactacggggtgccgtggtatgacatccagcccgtc 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 atcaacgggtggttctacgtcggcaactacggggtgccgtggtatgacatccagcccgtc 1920
Query: 1921 atcgccagccacccggtgacgtcgatgtttctgacgctgtcgatcctcaccggattgctg 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 atcgccagccacccggtgacgtcgatgtttctgacgctgtcgatcctcaccggattgctg 1980
Query: 1981 gcagcctggtatcacttccggatggactacgccgggcacaccgaagtcaaagacaaccgg 2040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1981 gcagcctggtatcacttccggatggactacgccgggcacaccgaagtcaaagacaaccgg 2040
Query: 2041 cgcaaccgcatcttggcctctacgccactgctggtggtcgcggtgatcatggtcgcaggc 2100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2041 cgcaaccgcatcttggcctctacgccactgctggtggtcgcggtgatcatggtcgcaggc 2100
Query: 2101 gaagtcggctcgatggccaaggccgcggtgttccgttacccgctttacaccaccgccaag 2160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2101 gaagtcggctcgatggccaaggccgcggtgttccgttacccgctttacaccaccgccaag 2160
Query: 2161 gccaacctgaccgcgctcagcaccgggctgtccagctgtgcgatggccgacgacgtgctg 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2161 gccaacctgaccgcgctcagcaccgggctgtccagctgtgcgatggccgacgacgtgctg 2220
Query: 2221 gccgagcccgaccccaatgccggcatgctgcaaccggttccgggccaggcgttcggaccg 2280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2221 gccgagcccgaccccaatgccggcatgctgcaaccggttccgggccaggcgttcggaccg 2280
Query: 2281 gacggaccgctgggcggtatcagtcccgtcggcttcaaacccgagggcgtgggcgaggac 2340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2281 gacggaccgctgggcggtatcagtcccgtcggcttcaaacccgagggcgtgggcgaggac 2340
Query: 2341 ctcaagtccgacccggtggtctccaaacccgggctggtcaactccgatgcgtcgcccaac 2400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2341 ctcaagtccgacccggtggtctccaaacccgggctggtcaactccgatgcgtcgcccaac 2400
Query: 2401 aaacccaacgccgccatcaccgactccgcgggcaccgccggagggaagggcccggtcggg 2460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2401 aaacccaacgccgccatcaccgactccgcgggcaccgccggagggaagggcccggtcggg 2460
Query: 2461 atcaacgggtcgcacgcggcgctgccgttcggattggacccggcacgtaccccggtgatg 2520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2461 atcaacgggtcgcacgcggcgctgccgttcggattggacccggcacgtaccccggtgatg 2520
Query: 2521 ggcagctacggggagaacaacctggccgccacggccacctcggcctggtaccagttaccg 2580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2521 ggcagctacggggagaacaacctggccgccacggccacctcggcctggtaccagttaccg 2580
Query: 2581 ccccgcagcccggaccggccgctggtggtggtttccgcggccggcgccatctggtcctac 2640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2581 ccccgcagcccggaccggccgctggtggtggtttccgcggccggcgccatctggtcctac 2640
Query: 2641 aaggaggacggcgatttcatctacggccagtccctgaaactgcagtggggcgtcaccggc 2700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2641 aaggaggacggcgatttcatctacggccagtccctgaaactgcagtggggcgtcaccggc 2700
Query: 2701 ccggacggccgcatccagccactggggcaggtatttccgatcgacatcggaccgcaaccc 2760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2701 ccggacggccgcatccagccactggggcaggtatttccgatcgacatcggaccgcaaccc 2760
Query: 2761 gcgtggcgcaatctgcggtttccgctggcctgggcgccgccggaggccgacgtggcgcgc 2820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2761 gcgtggcgcaatctgcggtttccgctggcctgggcgccgccggaggccgacgtggcgcgc 2820
Query: 2821 attgtcgcctatgacccgaacctgagccctgagcaatggttcgccttcaccccgccccgg 2880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2821 attgtcgcctatgacccgaacctgagccctgagcaatggttcgccttcaccccgccccgg 2880
Query: 2881 gttccggtgctggaatctctgcagcggttgatcgggtcagcgacaccggtgttgatggac 2940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2881 gttccggtgctggaatctctgcagcggttgatcgggtcagcgacaccggtgttgatggac 2940
Query: 2941 atcgcgaccgcagccaacttcccctgccagcgaccgttttccgagcatctcggcattgcc 3000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2941 atcgcgaccgcagccaacttcccctgccagcgaccgttttccgagcatctcggcattgcc 3000
Query: 3001 gagcttccgcagtaccggatcctgccggaccacaagcagacggcggcgtcgtcgaaccta 3060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3001 gagcttccgcagtaccggatcctgccggaccacaagcagacggcggcgtcgtcgaaccta 3060
Query: 3061 tggcagtccagctcgaccggcggtccgttcctgttcacccaggcgctgctgcgcacctcg 3120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3061 tggcagtccagctcgaccggcggtccgttcctgttcacccaggcgctgctgcgcacctcg 3120
Query: 3121 acgatcgccacgtacctgcgtggggactggtatcgcgactggggatcggtggagcagtac 3180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3121 acgatcgccacgtacctgcgtggggactggtatcgcgactggggatcggtggagcagtac 3180
Query: 3181 caccggctggtgccggccgatcaggctccagacgccgttgtcgaggagggcgtgatcact 3240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3181 caccggctggtgccggccgatcaggctccagacgccgttgtcgaggagggcgtgatcact 3240
Query: 3241 gtgcccggctggggtcggccaggaccgatcagggcgctgccatga 3285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3241 gtgcccggctggggtcggccaggaccgatcagggcgctgccatga 3285
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00141 79782 83078 len=3297
(3297 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218312.1 [gene=embB] [protein=indolylac... 6536 0.0
lcl|NC_000962.2_cdsid_NP_218310.1 [gene=embC] [protein=indolylac... 90 1e-17
>lcl|NC_000962.2_cdsid_NP_218312.1 [gene=embB]
[protein=indolylacetylinositol arabinosyltransferase]
[protein_id=NP_218312.1] [location=4246514..4249810]
Length = 3297
Score = 6536 bits (3297), Expect = 0.0
Identities = 3297/3297 (100%)
Strand = Plus / Plus
Query: 1 atgacacagtgcgcgagcagacgcaaaagcaccccaaatcgggcgattttgggggctttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgacacagtgcgcgagcagacgcaaaagcaccccaaatcgggcgattttgggggctttt 60
Query: 61 gcgtctgctcgcgggacgcgctgggtggccaccatcgccgggctgattggctttgtgttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcgtctgctcgcgggacgcgctgggtggccaccatcgccgggctgattggctttgtgttg 120
Query: 121 tcggtggcgacgccgctgctgcccgtcgtgcagaccaccgcgatgctcgactggccacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcggtggcgacgccgctgctgcccgtcgtgcagaccaccgcgatgctcgactggccacag 180
Query: 181 cgggggcaactgggcagcgtgaccgccccgctgatctcgctgacgccggtcgactttacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgggggcaactgggcagcgtgaccgccccgctgatctcgctgacgccggtcgactttacc 240
Query: 241 gccaccgtgccgtgcgacgtggtgcgcgccatgccacccgcgggcggggtggtgctgggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gccaccgtgccgtgcgacgtggtgcgcgccatgccacccgcgggcggggtggtgctgggc 300
Query: 301 accgcacccaagcaaggcaaggacgccaatttgcaggcgttgttcgtcgtcgtcagcgcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 accgcacccaagcaaggcaaggacgccaatttgcaggcgttgttcgtcgtcgtcagcgcc 360
Query: 361 cagcgcgtggacgtcaccgaccgcaacgtggtgatcttgtccgtgccgcgcgagcaggtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cagcgcgtggacgtcaccgaccgcaacgtggtgatcttgtccgtgccgcgcgagcaggtg 420
Query: 421 acgtccccgcagtgtcaacgcatcgaggtcacctctacccacgccggcaccttcgccaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acgtccccgcagtgtcaacgcatcgaggtcacctctacccacgccggcaccttcgccaac 480
Query: 481 ttcgtcgggctcaaggacccgtcgggcgcgccgctgcgcagcggcttccccgaccccaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttcgtcgggctcaaggacccgtcgggcgcgccgctgcgcagcggcttccccgaccccaac 540
Query: 541 ctgcgcccgcagattgtcggggtgttcaccgacctgaccgggcccgcgccgcccgggctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctgcgcccgcagattgtcggggtgttcaccgacctgaccgggcccgcgccgcccgggctg 600
Query: 601 gcggtctcggcgaccatcgacacccggttctccacccggccgaccacgctgaaactgctg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gcggtctcggcgaccatcgacacccggttctccacccggccgaccacgctgaaactgctg 660
Query: 661 gcgatcatcggggcgatcgtggccaccgtcgtcgcactgatcgcgttgtggcgcctggac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gcgatcatcggggcgatcgtggccaccgtcgtcgcactgatcgcgttgtggcgcctggac 720
Query: 721 cagttggacgggcggggctcaattgcccagctcctcctcaggccgttccggcctgcatcg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cagttggacgggcggggctcaattgcccagctcctcctcaggccgttccggcctgcatcg 780
Query: 781 tcgccgggcggcatgcgccggctgattccggcaagctggcgcaccttcaccctgaccgac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tcgccgggcggcatgcgccggctgattccggcaagctggcgcaccttcaccctgaccgac 840
Query: 841 gccgtggtgatattcggcttcctgctctggcatgtcatcggcgcgaattcgtcggacgac 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gccgtggtgatattcggcttcctgctctggcatgtcatcggcgcgaattcgtcggacgac 900
Query: 901 ggctacatcctgggcatggcccgagtcgccgaccacgccggctacatgtccaactatttc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ggctacatcctgggcatggcccgagtcgccgaccacgccggctacatgtccaactatttc 960
Query: 961 cgctggttcggcagcccggaggatcccttcggctggtattacaacctgctggcgctgatg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 cgctggttcggcagcccggaggatcccttcggctggtattacaacctgctggcgctgatg 1020
Query: 1021 acccatgtcagcgacgccagtctgtggatgcgcctgccagacctggccgccgggctagtg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 acccatgtcagcgacgccagtctgtggatgcgcctgccagacctggccgccgggctagtg 1080
Query: 1081 tgctggctgctgctgtcgcgtgaggtgctgccccgcctcgggccggcggtggaggccagc 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 tgctggctgctgctgtcgcgtgaggtgctgccccgcctcgggccggcggtggaggccagc 1140
Query: 1141 aaacccgcctactgggcggcggccatggtcttgctgaccgcgtggatgccgttcaacaac 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 aaacccgcctactgggcggcggccatggtcttgctgaccgcgtggatgccgttcaacaac 1200
Query: 1201 ggcctgcggccggagggcatcatcgcgctcggctcgctggtcacctatgtgctgatcgag 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ggcctgcggccggagggcatcatcgcgctcggctcgctggtcacctatgtgctgatcgag 1260
Query: 1261 cggtccatgcggtacagccggctcacaccggcggcgctggccgtcgttaccgccgcattc 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 cggtccatgcggtacagccggctcacaccggcggcgctggccgtcgttaccgccgcattc 1320
Query: 1321 acactgggtgtgcagcccaccggcctgatcgcggtggccgcgctggtggccggcggccgc 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 acactgggtgtgcagcccaccggcctgatcgcggtggccgcgctggtggccggcggccgc 1380
Query: 1381 ccgatgctgcggatcttggtgcgccgtcatcgcctggtcggcacgttgccgttggtgtcg 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 ccgatgctgcggatcttggtgcgccgtcatcgcctggtcggcacgttgccgttggtgtcg 1440
Query: 1441 ccgatgctggccgccggcaccgtcatcctgaccgtggtgttcgccgaccagaccctgtca 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 ccgatgctggccgccggcaccgtcatcctgaccgtggtgttcgccgaccagaccctgtca 1500
Query: 1501 acggtgttggaagccaccagggttcgcgccaaaatcgggccgagccaggcgtggtatacc 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 acggtgttggaagccaccagggttcgcgccaaaatcgggccgagccaggcgtggtatacc 1560
Query: 1561 gagaacctgcgttactactacctcatcctgcccaccgtcgacggttcgctgtcgcggcgc 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 gagaacctgcgttactactacctcatcctgcccaccgtcgacggttcgctgtcgcggcgc 1620
Query: 1621 ttcggctttttgatcaccgcgctatgcctgttcaccgcggtgttcatcatgttgcggcgc 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 ttcggctttttgatcaccgcgctatgcctgttcaccgcggtgttcatcatgttgcggcgc 1680
Query: 1681 aagcgaattcccagcgtggcccgcggaccggcgtggcggctgatgggcgtcatcttcggc 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 aagcgaattcccagcgtggcccgcggaccggcgtggcggctgatgggcgtcatcttcggc 1740
Query: 1741 accatgttcttcctgatgttcacgcccaccaagtgggtgcaccacttcgggctgttcgcc 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 accatgttcttcctgatgttcacgcccaccaagtgggtgcaccacttcgggctgttcgcc 1800
Query: 1801 gccgtaggggcggcgatggccgcgctgacgacggtgttggtatccccatcggtgctgcgc 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 gccgtaggggcggcgatggccgcgctgacgacggtgttggtatccccatcggtgctgcgc 1860
Query: 1861 tggtcgcgcaaccggatggcgttcctggcggcgttattcttcctgctggcgttgtgttgg 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 tggtcgcgcaaccggatggcgttcctggcggcgttattcttcctgctggcgttgtgttgg 1920
Query: 1921 gccaccaccaacggctggtggtatgtctccagctacggtgtgccgttcaacagcgcgatg 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 gccaccaccaacggctggtggtatgtctccagctacggtgtgccgttcaacagcgcgatg 1980
Query: 1981 ccgaagatcgacgggatcacagtcagcacaatctttttcgccctgtttgcgatcgccgcc 2040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1981 ccgaagatcgacgggatcacagtcagcacaatctttttcgccctgtttgcgatcgccgcc 2040
Query: 2041 ggctatgcggcctggctgcacttcgcgccccgcggcgccggcgaagggcggctgatccgc 2100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2041 ggctatgcggcctggctgcacttcgcgccccgcggcgccggcgaagggcggctgatccgc 2100
Query: 2101 gcgctgacgacagccccggtaccgatcgtggccggtttcatggcggcggtgttcgtcgcg 2160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2101 gcgctgacgacagccccggtaccgatcgtggccggtttcatggcggcggtgttcgtcgcg 2160
Query: 2161 tccatggtggccgggatcgtgcgacagtacccgacctactccaacggctggtccaacgtg 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2161 tccatggtggccgggatcgtgcgacagtacccgacctactccaacggctggtccaacgtg 2220
Query: 2221 cgggcgtttgtcggcggctgcggactggccgacgacgtactcgtcgagcctgataccaat 2280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2221 cgggcgtttgtcggcggctgcggactggccgacgacgtactcgtcgagcctgataccaat 2280
Query: 2281 gcgggtttcatgaagccgctggacggcgattcgggttcttggggccccttgggcccgctg 2340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2281 gcgggtttcatgaagccgctggacggcgattcgggttcttggggccccttgggcccgctg 2340
Query: 2341 ggtggagtcaacccggtcggcttcacgcccaacggcgtaccggaacacacggtggccgag 2400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2341 ggtggagtcaacccggtcggcttcacgcccaacggcgtaccggaacacacggtggccgag 2400
Query: 2401 gcgatcgtgatgaaacccaaccagcccggcaccgactacgactgggatgcgccgaccaag 2460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2401 gcgatcgtgatgaaacccaaccagcccggcaccgactacgactgggatgcgccgaccaag 2460
Query: 2461 ctgacgagtcctggcatcaatggttctacggtgccgctgccctatgggctcgatcccgcc 2520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2461 ctgacgagtcctggcatcaatggttctacggtgccgctgccctatgggctcgatcccgcc 2520
Query: 2521 cgggtaccgttggcaggcacctacaccaccggcgcacagcaacagagcacactcgtctcg 2580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2521 cgggtaccgttggcaggcacctacaccaccggcgcacagcaacagagcacactcgtctcg 2580
Query: 2581 gcgtggtatctcctgcctaagccggacgacgggcatccgctggtcgtggtgaccgccgcg 2640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2581 gcgtggtatctcctgcctaagccggacgacgggcatccgctggtcgtggtgaccgccgcg 2640
Query: 2641 ggcaagatcgccggcaacagcgtgctgcacgggtacacccccgggcagactgtggtgctc 2700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2641 ggcaagatcgccggcaacagcgtgctgcacgggtacacccccgggcagactgtggtgctc 2700
Query: 2701 gaatacgccatgccgggacccggagcgctggtacccgccgggcggatggtgcccgacgac 2760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2701 gaatacgccatgccgggacccggagcgctggtacccgccgggcggatggtgcccgacgac 2760
Query: 2761 ctatacggagagcagcccaaggcgtggcgcaacctgcgcttcgcccgagcaaagatgccc 2820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2761 ctatacggagagcagcccaaggcgtggcgcaacctgcgcttcgcccgagcaaagatgccc 2820
Query: 2821 gccgatgccgtcgcggtccgggtggtggccgaggatctgtcgctgacaccggaggactgg 2880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2821 gccgatgccgtcgcggtccgggtggtggccgaggatctgtcgctgacaccggaggactgg 2880
Query: 2881 atcgcggtgaccccgccgcgggtaccggacctgcgctcactgcaggaatatgtgggctcg 2940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2881 atcgcggtgaccccgccgcgggtaccggacctgcgctcactgcaggaatatgtgggctcg 2940
Query: 2941 acgcagccggtgctgctggactgggcggtcggtttggccttcccgtgccagcagccgatg 3000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2941 acgcagccggtgctgctggactgggcggtcggtttggccttcccgtgccagcagccgatg 3000
Query: 3001 ctgcacgccaatggcatcgccgaaatcccgaagttccgcatcacaccggactactcggct 3060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3001 ctgcacgccaatggcatcgccgaaatcccgaagttccgcatcacaccggactactcggct 3060
Query: 3061 aagaagctggacaccgacacgtgggaagacggcactaacggcggcctgctcgggatcacc 3120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3061 aagaagctggacaccgacacgtgggaagacggcactaacggcggcctgctcgggatcacc 3120
Query: 3121 gacctgttgctgcgggcccacgtcatggccacctacctgtcccgcgactgggcccgcgat 3180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3121 gacctgttgctgcgggcccacgtcatggccacctacctgtcccgcgactgggcccgcgat 3180
Query: 3181 tggggttccctgcgcaagttcgacaccctggtcgatgcccctcccgcccagctcgagttg 3240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3181 tggggttccctgcgcaagttcgacaccctggtcgatgcccctcccgcccagctcgagttg 3240
Query: 3241 ggcaccgcgacccgcagcggcctgtggtcaccgggcaagatccgaattggtccatag 3297
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3241 ggcaccgcgacccgcagcggcctgtggtcaccgggcaagatccgaattggtccatag 3297
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 12 cgcgagcagacgcaaaagcaccccaaatcgggcgattttgggggcttttgcgtctgctcg 71
||||||||||||||||||| ||| |||||| |||||| ||| |||||||||||||||||
Sbjct: 73 cgcgagcagacgcaaaagcccccaaaatcgcccgatttggggtgcttttgcgtctgctcg 14
Query: 72 cg 73
||
Sbjct: 13 cg 12
>lcl|NC_000962.2_cdsid_NP_218310.1 [gene=embC]
[protein=indolylacetylinositol arabinosyltransferase]
[protein_id=NP_218310.1] [location=4239863..4243147]
Length = 3285
Score = 89.7 bits (45), Expect = 1e-17
Identities = 132/161 (81%)
Strand = Plus / Plus
Query: 895 gacgacggctacatcctgggcatggcccgagtcgccgaccacgccggctacatgtccaac 954
|||||||||||||||||| ||||||||| || |||| || || ||||| ||| |||||
Sbjct: 877 gacgacggctacatcctgaccatggcccgggtgtccgagcatgcgggctatatggccaac 936
Query: 955 tatttccgctggttcggcagcccggaggatcccttcggctggtattacaacctgctggcg 1014
|| | |||||||||||||| || |||| || ||||||||||| ||| |||||||||||
Sbjct: 937 tactaccgctggttcggcacacccgaggcgcctttcggctggtactacgacctgctggcg 996
Query: 1015 ctgatgacccatgtcagcgacgccagtctgtggatgcgcct 1055
||| | | ||||||||| |||||| | |||||||||||
Sbjct: 997 ctgtgggctcatgtcagcacggccagtatctggatgcgcct 1037
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 544 cgcccgcagattgtcggggtgttcaccgacctgaccgggcccgcgcc 590
||||||||||| ||||||||||||||||||||| ||||||| |||||
Sbjct: 580 cgcccgcagatcgtcggggtgttcaccgacctggccgggccggcgcc 626
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00145 84353 86134 len=1782
(1782 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218314.1 [gene=fadE35] [protein=acyl-Co... 3533 0.0
>lcl|NC_000962.2_cdsid_NP_218314.1 [gene=fadE35] [protein=acyl-CoA
dehydrogenase] [protein_id=NP_218314.1]
[location=4251085..4252866]
Length = 1782
Score = 3533 bits (1782), Expect = 0.0
Identities = 1782/1782 (100%)
Strand = Plus / Plus
Query: 1 atgcccgagtacgacctagaggccgtggacaagctgcccttctcgacccctgaaaaggcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgcccgagtacgacctagaggccgtggacaagctgcccttctcgacccctgaaaaggcg 60
Query: 61 cagcgctaccaaacggaaaactatcgcggggccatgggcctcaactggtacctcacggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cagcgctaccaaacggaaaactatcgcggggccatgggcctcaactggtacctcacggat 120
Query: 121 ccgaccctgcagttcatcatggcctattacctacgacccgatgaattggcgttcgcagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccgaccctgcagttcatcatggcctattacctacgacccgatgaattggcgttcgcagaa 180
Query: 181 ccccatctgacccgcattggtgagctgacgggggggccagtgacgcgttgggccgaggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccccatctgacccgcattggtgagctgacgggggggccagtgacgcgttgggccgaggaa 240
Query: 241 accgaccgcaaccccccgcggctcgaacgctacgaccggtgggggcatgacatcagccgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 accgaccgcaaccccccgcggctcgaacgctacgaccggtgggggcatgacatcagccgg 300
Query: 301 gtagtgctgccggaatcgttcatccaatccaagcgcgccgtcatcgaggcgcgacaagcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtagtgctgccggaatcgttcatccaatccaagcgcgccgtcatcgaggcgcgacaagcc 360
Query: 361 gtgcgcgacgacgcggcacgggccggcgtcaagccgtcgctggcactcttcgccgccgac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtgcgcgacgacgcggcacgggccggcgtcaagccgtcgctggcactcttcgccgccgac 420
Query: 421 tatctgctcaaccaggccgatatcggtatggcttgcgcgctcgccactggcggcaacatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tatctgctcaaccaggccgatatcggtatggcttgcgcgctcgccactggcggcaacatg 480
Query: 481 gtccggtcgctggtgactgcctacgcgccacccgatgtgcgcgaattcgtcctaggcaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtccggtcgctggtgactgcctacgcgccacccgatgtgcgcgaattcgtcctaggcaaa 540
Query: 541 ctcaattccggcgagtgggacggcgaggccgcgcagctgctgacggagcgtgcgggcggc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctcaattccggcgagtgggacggcgaggccgcgcagctgctgacggagcgtgcgggcggc 600
Query: 601 tccgatctgggagctctggagacgacggccacccgcagcggcgacgtgtggctgctgaac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tccgatctgggagctctggagacgacggccacccgcagcggcgacgtgtggctgctgaac 660
Query: 661 ggcttcaagtggtttgcgtccaactgcgccggggaggcgttcgtggtgttggccaagccc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ggcttcaagtggtttgcgtccaactgcgccggggaggcgttcgtggtgttggccaagccc 720
Query: 721 gagggggcgcctgactcgactcgaggtgtggccaccttcctcgtgctacggacgcgccgt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gagggggcgcctgactcgactcgaggtgtggccaccttcctcgtgctacggacgcgccgt 780
Query: 781 gacggttcccgcaacggcgtgcgtatccgtcggctgaaggacaagctcggcacccgctct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gacggttcccgcaacggcgtgcgtatccgtcggctgaaggacaagctcggcacccgctct 840
Query: 841 gtcgcctccggtgaaatcgagttcgtcgacgccgaagcctttctgttgtccggcgaaccg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gtcgcctccggtgaaatcgagttcgtcgacgccgaagcctttctgttgtccggcgaaccg 900
Query: 901 agcgctgacgcgggcccgtccgacggcaagggactcacccgcatgatggagctgaccaac 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 agcgctgacgcgggcccgtccgacggcaagggactcacccgcatgatggagctgaccaac 960
Query: 961 agattgcggttgggcaccgcctcgttcgccctcggcaacgcgcgccgcgcgctggtcgaa 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 agattgcggttgggcaccgcctcgttcgccctcggcaacgcgcgccgcgcgctggtcgaa 1020
Query: 1021 tcgctgtgctacgccgggcagcggcgggcattcggtggggcgctcatcgacaagccgctg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 tcgctgtgctacgccgggcagcggcgggcattcggtggggcgctcatcgacaagccgctg 1080
Query: 1081 atgcgccgcaagctggccgaaatggtcgttgatgtggaagccgcgctggcgatggtgttc 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 atgcgccgcaagctggccgaaatggtcgttgatgtggaagccgcgctggcgatggtgttc 1140
Query: 1141 gacggcttcggagcggcgaaccaccgccagcccagatgcctgccgcaacgtatcgcggtg 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gacggcttcggagcggcgaaccaccgccagcccagatgcctgccgcaacgtatcgcggtg 1200
Query: 1201 ccggtcaccaagcttaagacttgccggctcgggatcaccgtggcatcggatgcgatcgag 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ccggtcaccaagcttaagacttgccggctcgggatcaccgtggcatcggatgcgatcgag 1260
Query: 1261 atccacggcggcaatggctacatcgagacctggccggtggcccggttgctgcgtgacgcg 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 atccacggcggcaatggctacatcgagacctggccggtggcccggttgctgcgtgacgcg 1320
Query: 1321 caagtcaacacgatctgggagggccccgacaacatcctgtgtctggatgtgcggcgcggg 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 caagtcaacacgatctgggagggccccgacaacatcctgtgtctggatgtgcggcgcggg 1380
Query: 1381 atcgagcagacgcgcgctcacgagacactgttggcgcggctgcgcgatgcggtgtcggtg 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 atcgagcagacgcgcgctcacgagacactgttggcgcggctgcgcgatgcggtgtcggtg 1440
Query: 1441 tccgacgatgacgacaccacgcggctggtctcgcgccgcattgaggacctcgacgcggcg 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 tccgacgatgacgacaccacgcggctggtctcgcgccgcattgaggacctcgacgcggcg 1500
Query: 1501 atcaccgcttggaccaaactcgacaggcagctggccgaggcgcggctgttcccgctggcc 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 atcaccgcttggaccaaactcgacaggcagctggccgaggcgcggctgttcccgctggcc 1560
Query: 1561 caattcatgggcgacgtctacgccggcgcgttgctcaccgagcaggccgcctgggaacgg 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 caattcatgggcgacgtctacgccggcgcgttgctcaccgagcaggccgcctgggaacgg 1620
Query: 1621 gcaacccgcggcaccgaccgcaaggcactcgtcgcccgcctgtacgcgcgccggtatctc 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 gcaacccgcggcaccgaccgcaaggcactcgtcgcccgcctgtacgcgcgccggtatctc 1680
Query: 1681 gccgaccaaggcccgctgcgcggtatcgacgcagattgcgatgaggcgctgcagcgtttc 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 gccgaccaaggcccgctgcgcggtatcgacgcagattgcgatgaggcgctgcagcgtttc 1740
Query: 1741 gacgaactcgtggcgggcgcgttcactgccgagcagacgtaa 1782
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 gacgaactcgtggcgggcgcgttcactgccgagcagacgtaa 1782
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00146 86261 87595 len=1335
(1335 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218315.1 [gene=Rv3798] [protein=transpo... 2646 0.0
lcl|NC_000962.2_cdsid_NP_215829.1 [gene=Rv1313c] [protein=transp... 2646 0.0
lcl|NC_000962.2_cdsid_NP_215255.1 [gene=Rv0741] [protein=transpo... 252 6e-67
>lcl|NC_000962.2_cdsid_NP_218315.1 [gene=Rv3798] [protein=transposase]
[protein_id=NP_218315.1] [location=4252993..4254327]
Length = 1335
Score = 2646 bits (1335), Expect = 0.0
Identities = 1335/1335 (100%)
Strand = Plus / Plus
Query: 1 gtgcgcaatgtgaggctatttcgtgcgctgctgggtgtcgacaagcgcaccgtgattgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgcgcaatgtgaggctatttcgtgcgctgctgggtgtcgacaagcgcaccgtgattgag 60
Query: 61 gacatcgaattcgaggaggatgacgccggagacggtgcgcgggtgatcgcccgggtgcgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gacatcgaattcgaggaggatgacgccggagacggtgcgcgggtgatcgcccgggtgcgg 120
Query: 121 ccacgaagtgcagtgttgcgccgctgtggtcgctgcggtcgcaaggcgtcctggtatgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccacgaagtgcagtgttgcgccgctgtggtcgctgcggtcgcaaggcgtcctggtatgac 180
Query: 181 cgcggtgcgggcctgcgccaatggcgcagtctggattggggcaccgtcgaggtgttcttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgcggtgcgggcctgcgccaatggcgcagtctggattggggcaccgtcgaggtgttcttg 240
Query: 241 gaggccgaggcgccgcgggtgaactgccccacccatgggccgacggtggtggcggtgccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaggccgaggcgccgcgggtgaactgccccacccatgggccgacggtggtggcggtgccg 300
Query: 301 tgggcgcgtcatcatgccgggcacacgtatgctttcgatgacacggtggcctggctggcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgggcgcgtcatcatgccgggcacacgtatgctttcgatgacacggtggcctggctggcg 360
Query: 361 gtggcgtgttcgaagaccgcggtgtgcgagttgatgcggatcgcctggcgcaccgtcggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtggcgtgttcgaagaccgcggtgtgcgagttgatgcggatcgcctggcgcaccgtcggg 420
Query: 421 gcgatcgtggcccgggtctgggccgacaccgaaaagcgcattgaccggttcgcgaacttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcgatcgtggcccgggtctgggccgacaccgaaaagcgcattgaccggttcgcgaacttg 480
Query: 481 cgccgcatcggtatcgatgagatctcctacaagcgccaccaccggtacctgacggtggtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgccgcatcggtatcgatgagatctcctacaagcgccaccaccggtacctgacggtggtc 540
Query: 541 gtcgatcacgacagcggccggttggtgtgggccgccccgggccacgacaaggccaccctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtcgatcacgacagcggccggttggtgtgggccgccccgggccacgacaaggccaccctg 600
Query: 601 ggcttgttcttcgatgccctgggcgctgagcgggccgcccagattactcacgtttcggcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ggcttgttcttcgatgccctgggcgctgagcgggccgcccagattactcacgtttcggcc 660
Query: 661 gatgccgcggactggatcgctgacgtggtcaccgagcgctgcccggatgcgattcaatgc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gatgccgcggactggatcgctgacgtggtcaccgagcgctgcccggatgcgattcaatgc 720
Query: 721 gccgatccgtttcatgtggtggcctgggccaccgaggcgctcgacgtcgagcggcgccga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gccgatccgtttcatgtggtggcctgggccaccgaggcgctcgacgtcgagcggcgccga 780
Query: 781 gcctggaacgacgcacgggcgatcgcgcgcaccgaacccaagtggggccggggccggccc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gcctggaacgacgcacgggcgatcgcgcgcaccgaacccaagtggggccggggccggccc 840
Query: 841 ggtaagaacgccgcaccacgtccgggccgcgagcgggcacggcggctcaagggcgcccgc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ggtaagaacgccgcaccacgtccgggccgcgagcgggcacggcggctcaagggcgcccgc 900
Query: 901 tacgcgctgtggaagaaccccgaggacctcaccgaacgccaaagcgccaaactggcctgg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 tacgcgctgtggaagaaccccgaggacctcaccgaacgccaaagcgccaaactggcctgg 960
Query: 961 atcgccaagaccgatccccgtctgtatcgcgcctacctgctcaaagagagcctgcggcat 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 atcgccaagaccgatccccgtctgtatcgcgcctacctgctcaaagagagcctgcggcat 1020
Query: 1021 gtgttttcggtcaagggcgaggaaggtaaacaggccctggaccggtggatctcctgggcc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gtgttttcggtcaagggcgaggaaggtaaacaggccctggaccggtggatctcctgggcc 1080
Query: 1081 cagcgctgtcgcatcccggtattcgtcgagcttgccgcccgcatcaaacgccaccgggtg 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 cagcgctgtcgcatcccggtattcgtcgagcttgccgcccgcatcaaacgccaccgggtg 1140
Query: 1141 gccatcgacgccgccctcgaccacggcctatcccaaggcctgatcgaatccaccaacacc 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gccatcgacgccgccctcgaccacggcctatcccaaggcctgatcgaatccaccaacacc 1200
Query: 1201 aagatccgcctactgacccggatcgcgttcggattccgctcaccacaagccctcatcgcc 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 aagatccgcctactgacccggatcgcgttcggattccgctcaccacaagccctcatcgcc 1260
Query: 1261 ctagccatgctcaccctcgccggccaccgccccaccctgccaggccgacacaaccaccca 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 ctagccatgctcaccctcgccggccaccgccccaccctgccaggccgacacaaccaccca 1320
Query: 1321 cagatcagtcagtag 1335
|||||||||||||||
Sbjct: 1321 cagatcagtcagtag 1335
>lcl|NC_000962.2_cdsid_NP_215829.1 [gene=Rv1313c]
[protein=transposase] [protein_id=NP_215829.1]
[location=complement(1468171..1469505)]
Length = 1335
Score = 2646 bits (1335), Expect = 0.0
Identities = 1335/1335 (100%)
Strand = Plus / Plus
Query: 1 gtgcgcaatgtgaggctatttcgtgcgctgctgggtgtcgacaagcgcaccgtgattgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgcgcaatgtgaggctatttcgtgcgctgctgggtgtcgacaagcgcaccgtgattgag 60
Query: 61 gacatcgaattcgaggaggatgacgccggagacggtgcgcgggtgatcgcccgggtgcgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gacatcgaattcgaggaggatgacgccggagacggtgcgcgggtgatcgcccgggtgcgg 120
Query: 121 ccacgaagtgcagtgttgcgccgctgtggtcgctgcggtcgcaaggcgtcctggtatgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccacgaagtgcagtgttgcgccgctgtggtcgctgcggtcgcaaggcgtcctggtatgac 180
Query: 181 cgcggtgcgggcctgcgccaatggcgcagtctggattggggcaccgtcgaggtgttcttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgcggtgcgggcctgcgccaatggcgcagtctggattggggcaccgtcgaggtgttcttg 240
Query: 241 gaggccgaggcgccgcgggtgaactgccccacccatgggccgacggtggtggcggtgccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaggccgaggcgccgcgggtgaactgccccacccatgggccgacggtggtggcggtgccg 300
Query: 301 tgggcgcgtcatcatgccgggcacacgtatgctttcgatgacacggtggcctggctggcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgggcgcgtcatcatgccgggcacacgtatgctttcgatgacacggtggcctggctggcg 360
Query: 361 gtggcgtgttcgaagaccgcggtgtgcgagttgatgcggatcgcctggcgcaccgtcggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtggcgtgttcgaagaccgcggtgtgcgagttgatgcggatcgcctggcgcaccgtcggg 420
Query: 421 gcgatcgtggcccgggtctgggccgacaccgaaaagcgcattgaccggttcgcgaacttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcgatcgtggcccgggtctgggccgacaccgaaaagcgcattgaccggttcgcgaacttg 480
Query: 481 cgccgcatcggtatcgatgagatctcctacaagcgccaccaccggtacctgacggtggtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgccgcatcggtatcgatgagatctcctacaagcgccaccaccggtacctgacggtggtc 540
Query: 541 gtcgatcacgacagcggccggttggtgtgggccgccccgggccacgacaaggccaccctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtcgatcacgacagcggccggttggtgtgggccgccccgggccacgacaaggccaccctg 600
Query: 601 ggcttgttcttcgatgccctgggcgctgagcgggccgcccagattactcacgtttcggcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ggcttgttcttcgatgccctgggcgctgagcgggccgcccagattactcacgtttcggcc 660
Query: 661 gatgccgcggactggatcgctgacgtggtcaccgagcgctgcccggatgcgattcaatgc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gatgccgcggactggatcgctgacgtggtcaccgagcgctgcccggatgcgattcaatgc 720
Query: 721 gccgatccgtttcatgtggtggcctgggccaccgaggcgctcgacgtcgagcggcgccga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gccgatccgtttcatgtggtggcctgggccaccgaggcgctcgacgtcgagcggcgccga 780
Query: 781 gcctggaacgacgcacgggcgatcgcgcgcaccgaacccaagtggggccggggccggccc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gcctggaacgacgcacgggcgatcgcgcgcaccgaacccaagtggggccggggccggccc 840
Query: 841 ggtaagaacgccgcaccacgtccgggccgcgagcgggcacggcggctcaagggcgcccgc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ggtaagaacgccgcaccacgtccgggccgcgagcgggcacggcggctcaagggcgcccgc 900
Query: 901 tacgcgctgtggaagaaccccgaggacctcaccgaacgccaaagcgccaaactggcctgg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 tacgcgctgtggaagaaccccgaggacctcaccgaacgccaaagcgccaaactggcctgg 960
Query: 961 atcgccaagaccgatccccgtctgtatcgcgcctacctgctcaaagagagcctgcggcat 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 atcgccaagaccgatccccgtctgtatcgcgcctacctgctcaaagagagcctgcggcat 1020
Query: 1021 gtgttttcggtcaagggcgaggaaggtaaacaggccctggaccggtggatctcctgggcc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gtgttttcggtcaagggcgaggaaggtaaacaggccctggaccggtggatctcctgggcc 1080
Query: 1081 cagcgctgtcgcatcccggtattcgtcgagcttgccgcccgcatcaaacgccaccgggtg 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 cagcgctgtcgcatcccggtattcgtcgagcttgccgcccgcatcaaacgccaccgggtg 1140
Query: 1141 gccatcgacgccgccctcgaccacggcctatcccaaggcctgatcgaatccaccaacacc 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gccatcgacgccgccctcgaccacggcctatcccaaggcctgatcgaatccaccaacacc 1200
Query: 1201 aagatccgcctactgacccggatcgcgttcggattccgctcaccacaagccctcatcgcc 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 aagatccgcctactgacccggatcgcgttcggattccgctcaccacaagccctcatcgcc 1260
Query: 1261 ctagccatgctcaccctcgccggccaccgccccaccctgccaggccgacacaaccaccca 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 ctagccatgctcaccctcgccggccaccgccccaccctgccaggccgacacaaccaccca 1320
Query: 1321 cagatcagtcagtag 1335
|||||||||||||||
Sbjct: 1321 cagatcagtcagtag 1335
>lcl|NC_000962.2_cdsid_NP_215255.1 [gene=Rv0741] [protein=transposase]
[protein_id=NP_215255.1] [location=832534..832848]
Length = 315
Score = 252 bits (127), Expect = 6e-67
Identities = 268/315 (85%)
Strand = Plus / Plus
Query: 1021 gtgttttcggtcaagggcgaggaaggtaaacaggccctggaccggtggatctcctgggcc 1080
|||||||||||||| ||||| ||||| || ||||| ||||| |||||||||||||||||
Sbjct: 1 gtgttttcggtcaaaggcgaagaaggcaagcaggcactggatcggtggatctcctgggcg 60
Query: 1081 cagcgctgtcgcatcccggtattcgtcgagcttgccgcccgcatcaaacgccaccgggtg 1140
| |||||| |||||||| || ||||| ||||| |||| | ||||| || |||||
Sbjct: 61 cggcgctgccgcatccccgtcttcgtggagctggccggcggcatcgtgcgacaccgccaa 120
Query: 1141 gccatcgacgccgccctcgaccacggcctatcccaaggcctgatcgaatccaccaacacc 1200
||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 121 gccatcgacgccgcccttgaccacggcctatggcaaggactgatcgaatccaccaacacc 180
Query: 1201 aagatccgcctactgacccggatcgcgttcggattccgctcaccacaagccctcatcgcc 1260
|||||||| || || |||||||||||||||||||||||||| || |||| |||||||||
Sbjct: 181 aagatccgactcctaacccggatcgcgttcggattccgctcccccgaagcactcatcgcc 240
Query: 1261 ctagccatgctcaccctcgccggccaccgccccaccctgccaggccgacacaaccaccca 1320
| ||||||||| |||||| ||||| ||||||| |||| || ||| || ||| ||||||
Sbjct: 241 ttggccatgctcgccctcggcggccgccgccccgccctaccgggcagaaccaaacaccca 300
Query: 1321 cagatcagtcagtag 1335
| |||||||||||||
Sbjct: 301 cggatcagtcagtag 315
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00151 89216 87648 len=1569
(1569 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218316.2 [gene=accD4] [protein=propiony... 3110 0.0
lcl|NC_000962.2_cdsid_NP_217797.1 [gene=accD5] [protein=propiony... 56 9e-08
>lcl|NC_000962.2_cdsid_NP_218316.2 [gene=accD4] [protein=propionyl-CoA
carboxylase subunit beta] [protein_id=NP_218316.2]
[location=complement(4254380..4255948)]
Length = 1569
Score = 3110 bits (1569), Expect = 0.0
Identities = 1569/1569 (100%)
Strand = Plus / Plus
Query: 1 gtgaccgtcaccgagccggttctgcataccaccgccgagaagctggcggagctgcgcgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgaccgtcaccgagccggttctgcataccaccgccgagaagctggcggagctgcgcgaa 60
Query: 61 cgcctggagttggccaaggaacccggcggtgagaaggccgccgccaagcgcgacaagaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgcctggagttggccaaggaacccggcggtgagaaggccgccgccaagcgcgacaagaag 120
Query: 121 ggcatcccgagtgcccgcgcccgcatctacgagctggtcgatccgggtagcttcatggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggcatcccgagtgcccgcgcccgcatctacgagctggtcgatccgggtagcttcatggag 180
Query: 181 atcggagcgctgtgccgcacccccggtgaccccaacgcgctctacggggacggcgtggtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atcggagcgctgtgccgcacccccggtgaccccaacgcgctctacggggacggcgtggtc 240
Query: 241 accggacatggcctcatcaacggccggccggtcggcgtgttctcgcacgaccaaaccgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 accggacatggcctcatcaacggccggccggtcggcgtgttctcgcacgaccaaaccgtg 300
Query: 301 ttcggcggcaccgtcggggagatgtttggccgcaaggtggcccggctgatggagtggtgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttcggcggcaccgtcggggagatgtttggccgcaaggtggcccggctgatggagtggtgc 360
Query: 361 gcgatggtcggctgcccgatcgtcggcatcaacgactccggcggcgcccgcatccaagac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcgatggtcggctgcccgatcgtcggcatcaacgactccggcggcgcccgcatccaagac 420
Query: 421 gccgtcacctcgctggcctggtacgccgagctggggcgccgccacgaactgctcagtggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gccgtcacctcgctggcctggtacgccgagctggggcgccgccacgaactgctcagtggg 480
Query: 481 ctggtgccgcagatctccatcattttgggcaaatgcgctgggggagcggtgtattcgccg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctggtgccgcagatctccatcattttgggcaaatgcgctgggggagcggtgtattcgccg 540
Query: 541 atccagaccgatctggtggtggcggtgcgcgaccagggttacatgttcgtcaccggcccc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atccagaccgatctggtggtggcggtgcgcgaccagggttacatgttcgtcaccggcccc 600
Query: 601 gacgtcatcaaggacgtcaccggtgaggacgtcagcctcgacgagctggggggcgccgac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gacgtcatcaaggacgtcaccggtgaggacgtcagcctcgacgagctggggggcgccgac 660
Query: 661 caccaggcgagctacggcaacatccatcaggtggtggagtccgaggccgccgcataccag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 caccaggcgagctacggcaacatccatcaggtggtggagtccgaggccgccgcataccag 720
Query: 721 tacgtgcgggactttctgtcgtttctgccgtccaactgcttcgacaaaccgccggtcgtc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tacgtgcgggactttctgtcgtttctgccgtccaactgcttcgacaaaccgccggtcgtc 780
Query: 781 aaccccgggctggaacccgaaatcaccggccacgatctggaactcgactcgatcgtgccg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aaccccgggctggaacccgaaatcaccggccacgatctggaactcgactcgatcgtgccg 840
Query: 841 gactcggacaacatggcctacgacatgcacgaggtcctgctgcggatcttcgacgacggc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gactcggacaacatggcctacgacatgcacgaggtcctgctgcggatcttcgacgacggc 900
Query: 901 gacttcctcgacgtcgctgcccaggccgggcaggcgatcatcaccggctacgcgcgggtg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gacttcctcgacgtcgctgcccaggccgggcaggcgatcatcaccggctacgcgcgggtg 960
Query: 961 gacgggcggaccgttggtgtggtggccaaccagcccatgcacatgtcgggggcgatcgac 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gacgggcggaccgttggtgtggtggccaaccagcccatgcacatgtcgggggcgatcgac 1020
Query: 1021 aacgaggcgtccgacaaggccgcacggttcatccggtttagcgacgcgttcgacatcccg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 aacgaggcgtccgacaaggccgcacggttcatccggtttagcgacgcgttcgacatcccg 1080
Query: 1081 ctggtgttcgtcgtggacacaccggggtttttgcccggggtggaacaggaaaagaacggg 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ctggtgttcgtcgtggacacaccggggtttttgcccggggtggaacaggaaaagaacggg 1140
Query: 1141 atcatcaagcgcggtgggaggttcttgtacgcggtggtcgaggctgatgtgccgaaggtg 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 atcatcaagcgcggtgggaggttcttgtacgcggtggtcgaggctgatgtgccgaaggtg 1200
Query: 1201 acgatcaccatccgcaagtcctacggcggtgcctacgcggtgatggggtccaagcagctg 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 acgatcaccatccgcaagtcctacggcggtgcctacgcggtgatggggtccaagcagctg 1260
Query: 1261 accgccgacctgaacttcgcctggcccaccgcgcgcatcgcggtgatcggcgccgacggg 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 accgccgacctgaacttcgcctggcccaccgcgcgcatcgcggtgatcggcgccgacggg 1320
Query: 1321 gccgcgcagttgctgatgaagcgtttcccggacccgaatgcgccggaggcgcaagcgatc 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 gccgcgcagttgctgatgaagcgtttcccggacccgaatgcgccggaggcgcaagcgatc 1380
Query: 1381 cggaagagcttcgtcgagaattacaacctcaacatggcgatcccgtggatcgccgccgag 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 cggaagagcttcgtcgagaattacaacctcaacatggcgatcccgtggatcgccgccgag 1440
Query: 1441 cgcgggttcatcgatgccgtcatcgacccgcatgagacccggctgctgttgcgcaagtcg 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 cgcgggttcatcgatgccgtcatcgacccgcatgagacccggctgctgttgcgcaagtcg 1500
Query: 1501 atgcacctgctgcgggacaagcagctgtggtggcgggtgggccgcaagcacggcctgatc 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 atgcacctgctgcgggacaagcagctgtggtggcgggtgggccgcaagcacggcctgatc 1560
Query: 1561 ccggtctag 1569
|||||||||
Sbjct: 1561 ccggtctag 1569
>lcl|NC_000962.2_cdsid_NP_217797.1 [gene=accD5]
[protein=propionyl-CoA carboxylase subunit beta]
[protein_id=NP_217797.1] [location=3662062..3663708]
Length = 1647
Score = 56.0 bits (28), Expect = 9e-08
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 583 atgttcgtcaccggccccgacgtcatcaaggacgtcaccggtgaggacgtca 634
|||||| ||||||| ||||||||||||||| ||||||||| ||||| ||||
Sbjct: 640 atgttcatcaccgggcccgacgtcatcaagaccgtcaccggcgaggaagtca 691
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00163 94414 89213 len=5202
(5202 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218317.1 [gene=pks13] [protein=polyketi... 1.031e+04 0.0
lcl|NC_000962.2_cdsid_NP_217447.1 [gene=ppsA] [protein=phenolpth... 52 4e-06
>lcl|NC_000962.2_cdsid_NP_218317.1 [gene=pks13] [protein=polyketide
synthase] [protein_id=NP_218317.1]
[location=complement(4255945..4261146)]
Length = 5202
Score = 1.031e+04 bits (5202), Expect = 0.0
Identities = 5202/5202 (100%)
Strand = Plus / Plus
Query: 1 atggctgacgtagcggaatcccaggagaacgcccccgccgaaagggccgagctaacggtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggctgacgtagcggaatcccaggagaacgcccccgccgaaagggccgagctaacggtc 60
Query: 61 cccgagatgcgccagtggctgcgcaactgggtgggtaaggccgtcggaaaggcaccggac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cccgagatgcgccagtggctgcgcaactgggtgggtaaggccgtcggaaaggcaccggac 120
Query: 121 tcgatcgacgaatcggtgcccatggtggagctgggtctgtcgtcgcgcgatgccgtcgcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcgatcgacgaatcggtgcccatggtggagctgggtctgtcgtcgcgcgatgccgtcgcg 180
Query: 181 atggccgccgacatagaagacctgaccggggtcacgctgtcggtcgcggtggcgttcgcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atggccgccgacatagaagacctgaccggggtcacgctgtcggtcgcggtggcgttcgcg 240
Query: 241 catccgaccatcgaatcgctggccacccggatcatcgagggcgagccggagaccgaccta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 catccgaccatcgaatcgctggccacccggatcatcgagggcgagccggagaccgaccta 300
Query: 301 gcgggcgatgacgccgaagactggtcgcgcaccggcccggccgagcgcgtcgacatcgcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcgggcgatgacgccgaagactggtcgcgcaccggcccggccgagcgcgtcgacatcgcg 360
Query: 361 atcgtgggcttgtccacccgcttcccgggcgagatgaacacccccgagcagacctggcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atcgtgggcttgtccacccgcttcccgggcgagatgaacacccccgagcagacctggcag 420
Query: 421 gcgctgctggaaggccgcgacgggatcaccgacctgcccgacgggcgctggtcggaattc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcgctgctggaaggccgcgacgggatcaccgacctgcccgacgggcgctggtcggaattc 480
Query: 481 ctcgaagagccgcggctggccgcgcgggtcgccggggcccgcacccggggcggctacctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctcgaagagccgcggctggccgcgcgggtcgccggggcccgcacccggggcggctacctg 540
Query: 541 aaggacatcaagggcttcgattcggagttcttcgcggtggccaagaccgaagccgacaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaggacatcaagggcttcgattcggagttcttcgcggtggccaagaccgaagccgacaac 600
Query: 601 atcgacccgcagcagcggatggcgctggagctgacctgggaggcgctcgagcacgcccgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atcgacccgcagcagcggatggcgctggagctgacctgggaggcgctcgagcacgcccgc 660
Query: 661 atcccggcgtcgagcctgcgcggccaggccgtcggtgtgtacatcggcagctccaccaac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atcccggcgtcgagcctgcgcggccaggccgtcggtgtgtacatcggcagctccaccaac 720
Query: 721 gactacagcttcctggcggtgtcggacccgacggtcgcgcacccgtatgcgatcaccggc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gactacagcttcctggcggtgtcggacccgacggtcgcgcacccgtatgcgatcaccggc 780
Query: 781 accagcagctcgatcatcgccaaccgggtgtcctacttctacgacttccacggaccgtcg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 accagcagctcgatcatcgccaaccgggtgtcctacttctacgacttccacggaccgtcg 840
Query: 841 gtcaccattgacaccgcgtgctcgagttcgctggtggccatccaccagggggtgcaggcg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gtcaccattgacaccgcgtgctcgagttcgctggtggccatccaccagggggtgcaggcg 900
Query: 901 ctgcgcaacggcgaggccgacgtagtggtcgccggcggggtgaacgcgttgatcacaccg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ctgcgcaacggcgaggccgacgtagtggtcgccggcggggtgaacgcgttgatcacaccg 960
Query: 961 atggtcaccctgggtttcgacgagatcggtgcggtgctggcgcccgacggccggatcaag 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 atggtcaccctgggtttcgacgagatcggtgcggtgctggcgcccgacggccggatcaag 1020
Query: 1021 tcgttctcagccgacgccgacggctacacccgctccgaaggcggcggcatgctggtgctc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 tcgttctcagccgacgccgacggctacacccgctccgaaggcggcggcatgctggtgctc 1080
Query: 1081 aagcgggtcgacgacgcccgccgcgacggcgacgcgatcctggccgtgatcgccggcagc 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 aagcgggtcgacgacgcccgccgcgacggcgacgcgatcctggccgtgatcgccggcagc 1140
Query: 1141 gcggtcaaccacgacggccggtccaacggcctgatcgcacccaaccaggacgcgcaggcc 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gcggtcaaccacgacggccggtccaacggcctgatcgcacccaaccaggacgcgcaggcc 1200
Query: 1201 gacgtgctgcgccgggcctacaaggacgccggcatcgatccgcgcaccgtcgactacatc 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 gacgtgctgcgccgggcctacaaggacgccggcatcgatccgcgcaccgtcgactacatc 1260
Query: 1261 gaggcgcacggcaccggcaccatcctcggcgacccaatcgaggccgaggcgctgggccgg 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 gaggcgcacggcaccggcaccatcctcggcgacccaatcgaggccgaggcgctgggccgg 1320
Query: 1321 gtggtcggtaggggccgtccggccgatcggccggcgctgctgggtgcggtgaaaaccaac 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 gtggtcggtaggggccgtccggccgatcggccggcgctgctgggtgcggtgaaaaccaac 1380
Query: 1381 gtcgggcacctggaatcggcggccggcgcggccagcatggccaaggtggtgctggcgctg 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 gtcgggcacctggaatcggcggccggcgcggccagcatggccaaggtggtgctggcgctg 1440
Query: 1441 cagcacgacaaactgccgccgtcgatcaacttcgccggccccagcccctacatcgacttc 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 cagcacgacaaactgccgccgtcgatcaacttcgccggccccagcccctacatcgacttc 1500
Query: 1501 gacgcgatgcggttgaagatgatcaccacgcccaccgactggccgcgatacggcggctac 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 gacgcgatgcggttgaagatgatcaccacgcccaccgactggccgcgatacggcggctac 1560
Query: 1561 gcgctggccggggtgtccagcttcggcttcggcggcgccaacgcgcacgtggtggtgcgc 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 gcgctggccggggtgtccagcttcggcttcggcggcgccaacgcgcacgtggtggtgcgc 1620
Query: 1621 gaggtcctgccgcgtgacgtggtggaaaaggaaccggaacccgagccggaacccaaggcg 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 gaggtcctgccgcgtgacgtggtggaaaaggaaccggaacccgagccggaacccaaggcg 1680
Query: 1681 gccgccgaacccgccgaggcgcccacgttggcaggccacgcgctgcggttcgacgagttc 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 gccgccgaacccgccgaggcgcccacgttggcaggccacgcgctgcggttcgacgagttc 1740
Query: 1741 ggcaacatcatcaccgactcggcggtcgccgaagagccggagcccgaactgcccggagtc 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 ggcaacatcatcaccgactcggcggtcgccgaagagccggagcccgaactgcccggagtc 1800
Query: 1801 accgaggaggcgctgcggctcaaggaagccgcgttggaagagcttgcggcccaagaggtt 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 accgaggaggcgctgcggctcaaggaagccgcgttggaagagcttgcggcccaagaggtt 1860
Query: 1861 acggcaccattggtcccgttggcggtgtcggcgtttctgacgtcccgcaagaaggcggcg 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 acggcaccattggtcccgttggcggtgtcggcgtttctgacgtcccgcaagaaggcggcg 1920
Query: 1921 gccgccgagttggcggactggatgcaaagcccggaaggccaggcctcctcgctggaatcg 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 gccgccgagttggcggactggatgcaaagcccggaaggccaggcctcctcgctggaatcg 1980
Query: 1981 atcggcaggtcgttgtcgcggcgcaaccacggccgttcccgcgcggtggtgttggcccac 2040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1981 atcggcaggtcgttgtcgcggcgcaaccacggccgttcccgcgcggtggtgttggcccac 2040
Query: 2041 gaccacgacgaggccatcaagggcctgcgcgcggtcgccgcgggcaagcaggcgccgaac 2100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2041 gaccacgacgaggccatcaagggcctgcgcgcggtcgccgcgggcaagcaggcgccgaac 2100
Query: 2101 gtgttcagcgtcgacgggccggtgaccaccggcccggtctgggtgctcgccggattcggc 2160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2101 gtgttcagcgtcgacgggccggtgaccaccggcccggtctgggtgctcgccggattcggc 2160
Query: 2161 gcccagcatcgcaagatgggcaagagcctgtacctgcgcaacgaggtgttcgcggcgtgg 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2161 gcccagcatcgcaagatgggcaagagcctgtacctgcgcaacgaggtgttcgcggcgtgg 2220
Query: 2221 atcgagaaggtcgacgccctggtccaagacgagctgggctactcggtgctggagctgatc 2280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2221 atcgagaaggtcgacgccctggtccaagacgagctgggctactcggtgctggagctgatc 2280
Query: 2281 ctggacgacgcgcaggactacggcatcgagaccacccaggtcaccatcttcgcgatccag 2340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2281 ctggacgacgcgcaggactacggcatcgagaccacccaggtcaccatcttcgcgatccag 2340
Query: 2341 atcgcgctgggtgagctgctgcgccatcacggcgccaaaccggccgcggtcatcggccag 2400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2341 atcgcgctgggtgagctgctgcgccatcacggcgccaaaccggccgcggtcatcggccag 2400
Query: 2401 tcgctgggtgaggccgcgtcggcctacttcgccggcgggctgtcgctgcgggatgccacc 2460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2401 tcgctgggtgaggccgcgtcggcctacttcgccggcgggctgtcgctgcgggatgccacc 2460
Query: 2461 cgggcgatctgctcgcgctcgcacctgatgggcgagggtgaggcgatgctgttcggcgag 2520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2461 cgggcgatctgctcgcgctcgcacctgatgggcgagggtgaggcgatgctgttcggcgag 2520
Query: 2521 tacatccggttgatggcgctggtggaatactccgccgacgaaatcagagaagtgttctcc 2580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2521 tacatccggttgatggcgctggtggaatactccgccgacgaaatcagagaagtgttctcc 2580
Query: 2581 gacttccccgatctggaggtgtgtgtctacgccgcgcccacccagacggtcatcggcggc 2640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2581 gacttccccgatctggaggtgtgtgtctacgccgcgcccacccagacggtcatcggcggc 2640
Query: 2641 ccccccgagcaggtggacgcgatccttgcccgcgccgaggccgagggcaagttcgcccgc 2700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2641 ccccccgagcaggtggacgcgatccttgcccgcgccgaggccgagggcaagttcgcccgc 2700
Query: 2701 aaattcgcgaccaagggcgccagccacacctcgcagatggacccgctgctgggcgagctc 2760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2701 aaattcgcgaccaagggcgccagccacacctcgcagatggacccgctgctgggcgagctc 2760
Query: 2761 accgcggagctgcaaggcatcaagccgacgagcccgacgtgtgggatcttctcgacggtg 2820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2761 accgcggagctgcaaggcatcaagccgacgagcccgacgtgtgggatcttctcgacggtg 2820
Query: 2821 cacgagggccgctacatcaaacccggcggcgaacccatccacgacgtcgaatactggaag 2880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2821 cacgagggccgctacatcaaacccggcggcgaacccatccacgacgtcgaatactggaag 2880
Query: 2881 aaggggctgcggcattccgtctacttcacccacggcatccgcaacgccgtcgacagcggg 2940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2881 aaggggctgcggcattccgtctacttcacccacggcatccgcaacgccgtcgacagcggg 2940
Query: 2941 cacaccaccttcctggagctggcacccaatccggtggcgctgatgcaggtcgccctgacc 3000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2941 cacaccaccttcctggagctggcacccaatccggtggcgctgatgcaggtcgccctgacc 3000
Query: 3001 accgccgatgccgggctgcatgacgcccagttgatcccgacgctggcccgcaagcaagac 3060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3001 accgccgatgccgggctgcatgacgcccagttgatcccgacgctggcccgcaagcaagac 3060
Query: 3061 gaggtctcctcgatggtctcgaccatggcgcagctgtatgtgtacggccacgacctggac 3120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3061 gaggtctcctcgatggtctcgaccatggcgcagctgtatgtgtacggccacgacctggac 3120
Query: 3121 atacgcacgctgtttagccgcgccagtgggccgcaggattacgcgaacattccgccgacc 3180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3121 atacgcacgctgtttagccgcgccagtgggccgcaggattacgcgaacattccgccgacc 3180
Query: 3181 cggttcaagcgcaaggagcactggctgcccgcgcacttctccggcgacggctcgacgtac 3240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3181 cggttcaagcgcaaggagcactggctgcccgcgcacttctccggcgacggctcgacgtac 3240
Query: 3241 atgccgggcacccatgtcgccctgccggatgggcggcacgtctgggagtacgcgccgcgg 3300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3241 atgccgggcacccatgtcgccctgccggatgggcggcacgtctgggagtacgcgccgcgg 3300
Query: 3301 gacggcaatgtggacttggccgcgttggtcagggccgccgccgcccacgtgcttccggac 3360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3301 gacggcaatgtggacttggccgcgttggtcagggccgccgccgcccacgtgcttccggac 3360
Query: 3361 gcgcaactgaccgccgccgagcagcgcgcggtgcccggcgacggcgcccggctggtgacg 3420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3361 gcgcaactgaccgccgccgagcagcgcgcggtgcccggcgacggcgcccggctggtgacg 3420
Query: 3421 acgatgacccgtcaccccggcggcgcctcggtgcaggtgcacgcccgcatcgacgagtcc 3480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3421 acgatgacccgtcaccccggcggcgcctcggtgcaggtgcacgcccgcatcgacgagtcc 3480
Query: 3481 ttcacgctggtctacgacgccctggtgtcccgagcggggtccgaatcggtgttgcccacc 3540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3481 ttcacgctggtctacgacgccctggtgtcccgagcggggtccgaatcggtgttgcccacc 3540
Query: 3541 gcggtgggtgcggcgacggcgatcgcggttgcggacggggcgcctgtcgcgccggaaacg 3600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3541 gcggtgggtgcggcgacggcgatcgcggttgcggacggggcgcctgtcgcgccggaaacg 3600
Query: 3601 cccgccgaagacgcggacgccgagacgctttcggacagcctgaccacccgttacatgccg 3660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3601 cccgccgaagacgcggacgccgagacgctttcggacagcctgaccacccgttacatgccg 3660
Query: 3661 tccggcatgacccgatggtcgcctgattccggtgagaccatcgccgagcggctgggcctg 3720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3661 tccggcatgacccgatggtcgcctgattccggtgagaccatcgccgagcggctgggcctg 3720
Query: 3721 attgtcgggtctgcgatgggctatgagcccgaggacctgccgtgggaggtgccgctgatc 3780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3721 attgtcgggtctgcgatgggctatgagcccgaggacctgccgtgggaggtgccgctgatc 3780
Query: 3781 gagcttggcctggactcgctgatggcggtgcgcatcaaaaaccgcgtcgagtacgacttc 3840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3781 gagcttggcctggactcgctgatggcggtgcgcatcaaaaaccgcgtcgagtacgacttc 3840
Query: 3841 gacctgccaccgatccagctgaccgcggtgcgcgacgccaacctctacaacgtggagaag 3900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3841 gacctgccaccgatccagctgaccgcggtgcgcgacgccaacctctacaacgtggagaag 3900
Query: 3901 ctgatcgaatacgcggtcgagcaccgtgacgaggtgcagcagctgcacgagcaccagaaa 3960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3901 ctgatcgaatacgcggtcgagcaccgtgacgaggtgcagcagctgcacgagcaccagaaa 3960
Query: 3961 acccagaccgctgaggagatcgcgcgggcccaggccgaattgctgcatggcaaggtgggc 4020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3961 acccagaccgctgaggagatcgcgcgggcccaggccgaattgctgcatggcaaggtgggc 4020
Query: 4021 aagaccgagccggtcgactcggaagccggggttgcgctcccgtcgccgcaaaacggcgag 4080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4021 aagaccgagccggtcgactcggaagccggggttgcgctcccgtcgccgcaaaacggcgag 4080
Query: 4081 cagccaaacccgacagggcccgcgctcaacgtcgacgtgccgccgcgggacgctgccgag 4140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4081 cagccaaacccgacagggcccgcgctcaacgtcgacgtgccgccgcgggacgctgccgag 4140
Query: 4141 cgggtcaccttcgccacctgggcgatcgtcaccggcaagtccccgggcggcatcttcaac 4200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4141 cgggtcaccttcgccacctgggcgatcgtcaccggcaagtccccgggcggcatcttcaac 4200
Query: 4201 gagctgcccaggctggacgacgaggccgcggccaagattgcgcagcggctttccgagcgc 4260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4201 gagctgcccaggctggacgacgaggccgcggccaagattgcgcagcggctttccgagcgc 4260
Query: 4261 gccgaaggcccgatcaccgccgaggacgtgctgacgtcgtcgaacatcgaggcgctggcc 4320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4261 gccgaaggcccgatcaccgccgaggacgtgctgacgtcgtcgaacatcgaggcgctggcc 4320
Query: 4321 gacaaggtgcgcacgtatttggaggccgggcagatcgatgggttcgtccgcaccctgcgg 4380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4321 gacaaggtgcgcacgtatttggaggccgggcagatcgatgggttcgtccgcaccctgcgg 4380
Query: 4381 gcgcggcccgaagcaggcgggaaggtgccggtgttcgtgtttcatccggccggcggctcg 4440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4381 gcgcggcccgaagcaggcgggaaggtgccggtgttcgtgtttcatccggccggcggctcg 4440
Query: 4441 acggtggtgtacgagccgctgctgggccggctgccggcggacaccccaatgtatggcttc 4500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4441 acggtggtgtacgagccgctgctgggccggctgccggcggacaccccaatgtatggcttc 4500
Query: 4501 gaacgggtcgaggggtcgatcgaagagcgtgcacagcagtacgtgccgaagctgatcgag 4560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4501 gaacgggtcgaggggtcgatcgaagagcgtgcacagcagtacgtgccgaagctgatcgag 4560
Query: 4561 atgcagggcgacgggccctatgtcctggtgggttggtcgctgggcggtgtgctggcctac 4620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4561 atgcagggcgacgggccctatgtcctggtgggttggtcgctgggcggtgtgctggcctac 4620
Query: 4621 gcgtgcgcgatcggtttgcggcggctgggcaaggacgtgcggttcgtcgggctgatcgac 4680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4621 gcgtgcgcgatcggtttgcggcggctgggcaaggacgtgcggttcgtcgggctgatcgac 4680
Query: 4681 gcggtgcgcgccggtgaggagatcccgcagaccaaggaggagatccgcaagcgctgggac 4740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4681 gcggtgcgcgccggtgaggagatcccgcagaccaaggaggagatccgcaagcgctgggac 4740
Query: 4741 cgctacgccgccttcgccgagaagacgttcaacgtgaccatcccggcgatcccgtacgag 4800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4741 cgctacgccgccttcgccgagaagacgttcaacgtgaccatcccggcgatcccgtacgag 4800
Query: 4801 cagctcgaggagctcgacgacgagggccaggtccggttcgtgctggacgccgtcagccag 4860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4801 cagctcgaggagctcgacgacgagggccaggtccggttcgtgctggacgccgtcagccag 4860
Query: 4861 tccggtgtgcagatcccggccgggatcatcgaacaccaacgcacgtcgtatctggacaac 4920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4861 tccggtgtgcagatcccggccgggatcatcgaacaccaacgcacgtcgtatctggacaac 4920
Query: 4921 cgggcgatcgacaccgcccagatccagccgtacgacgggcatgtcaccctctacatggcc 4980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4921 cgggcgatcgacaccgcccagatccagccgtacgacgggcatgtcaccctctacatggcc 4980
Query: 4981 gatcgctaccatgacgacgcgatcatgttcgagccccgctacgccgtgcgccagccggac 5040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4981 gatcgctaccatgacgacgcgatcatgttcgagccccgctacgccgtgcgccagccggac 5040
Query: 5041 ggcgggtggggcgagtacgtttccgacctcgaggtggtgccgatcggtggcgagcacatt 5100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5041 ggcgggtggggcgagtacgtttccgacctcgaggtggtgccgatcggtggcgagcacatt 5100
Query: 5101 caggccatcgacgagccgatcatcgccaaggtgggcgaacacatgagccgcgcgttgggg 5160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5101 caggccatcgacgagccgatcatcgccaaggtgggcgaacacatgagccgcgcgttgggg 5160
Query: 5161 cagatcgaggccgatcgaacaagtgaggtaggcaagcagtga 5202
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5161 cagatcgaggccgatcgaacaagtgaggtaggcaagcagtga 5202
>lcl|NC_000962.2_cdsid_NP_217447.1 [gene=ppsA]
[protein=phenolpthiocerol synthesis type-I polyketide
synthase PPSA] [protein_id=NP_217447.1]
[location=3245445..3251075]
Length = 5631
Score = 52.0 bits (26), Expect = 4e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 1141 gcggtcaaccacgacggccggtccaacggcctgatcgcacccaacc 1186
||||||||||| |||||||| |||||||| ||||| || |||||||
Sbjct: 1096 gcggtcaaccaggacggccgatccaacgggctgatggcccccaacc 1141
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00167 96334 94421 len=1914
(1914 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218318.1 [gene=fadD32] [protein=long-ch... 3794 0.0
>lcl|NC_000962.2_cdsid_NP_218318.1 [gene=fadD32]
[protein=long-chain-fatty-acid--CoA ligase]
[protein_id=NP_218318.1]
[location=complement(4261153..4263066)]
Length = 1914
Score = 3794 bits (1914), Expect = 0.0
Identities = 1914/1914 (100%)
Strand = Plus / Plus
Query: 1 atgtttgtgacaggagagagtgggatggcgtaccacaacccgttcatcgtgaatggaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgtttgtgacaggagagagtgggatggcgtaccacaacccgttcatcgtgaatggaaag 60
Query: 61 atcaggttcccagccaacaccaacctggttcgtcacgtcgaaaagtgggcgaaggttcgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcaggttcccagccaacaccaacctggttcgtcacgtcgaaaagtgggcgaaggttcgt 120
Query: 121 ggcgacaagctggcctaccggttcctggacttttccaccgaacgagacggtgtcgcgcgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggcgacaagctggcctaccggttcctggacttttccaccgaacgagacggtgtcgcgcgc 180
Query: 181 gacatcttgtggtctgacttcagcgcgcgcaaccgtgcggtgggagcccgcctgcagcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gacatcttgtggtctgacttcagcgcgcgcaaccgtgcggtgggagcccgcctgcagcaa 240
Query: 241 gtcacccagccgggtgaccgcgtcgccatcctgtgcccgcagaacctggactacctcatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtcacccagccgggtgaccgcgtcgccatcctgtgcccgcagaacctggactacctcatc 300
Query: 301 tccttcttcggcgccctctactccggccgcattgcggtgccgttgttcgacccggccgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tccttcttcggcgccctctactccggccgcattgcggtgccgttgttcgacccggccgag 360
Query: 361 ccggggcacgtcggtcggttacacgcggtgctcgacgactgtgccccgtcgacgatcctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccggggcacgtcggtcggttacacgcggtgctcgacgactgtgccccgtcgacgatcctg 420
Query: 421 accaccaccgactccgccgaaggggtccgcaagttcatccgggcccgatcggccaaggag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 accaccaccgactccgccgaaggggtccgcaagttcatccgggcccgatcggccaaggag 480
Query: 481 cgcccgcgcgtcattgccgtcgacgcggtgcccaccgaagtcgccgccacctggcagcag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgcccgcgcgtcattgccgtcgacgcggtgcccaccgaagtcgccgccacctggcagcag 540
Query: 541 cccgaggccaacgaggaaaccgtcgcgtacttgcagtacacgtcgggttccacccgcata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cccgaggccaacgaggaaaccgtcgcgtacttgcagtacacgtcgggttccacccgcata 600
Query: 601 ccgagcggcgtgcagatcacccatctgaacctgcccaccaatgtggtgcaggtgctcaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ccgagcggcgtgcagatcacccatctgaacctgcccaccaatgtggtgcaggtgctcaat 660
Query: 661 gccctggaaggacaggaaggcgaccgcggggtcagctggctcccgttcttccacgacatg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gccctggaaggacaggaaggcgaccgcggggtcagctggctcccgttcttccacgacatg 720
Query: 721 ggtctgatcacggtgctgctggcgtcggtgctaggccacagcttcacctttatgacgccc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ggtctgatcacggtgctgctggcgtcggtgctaggccacagcttcacctttatgacgccc 780
Query: 781 gcggcgttcgtgcggcggcccggtcgctggatccgcgagctcgcccgcaagcccggagaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gcggcgttcgtgcggcggcccggtcgctggatccgcgagctcgcccgcaagcccggagaa 840
Query: 841 accggtggcaccttctctgcggcgccgaacttcgcattcgaacacgccgcggtgcgcggt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 accggtggcaccttctctgcggcgccgaacttcgcattcgaacacgccgcggtgcgcggt 900
Query: 901 gtgcctcgagacgacgagccgccgctggacctgagcaacgtcaagggcatcctcaacggc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gtgcctcgagacgacgagccgccgctggacctgagcaacgtcaagggcatcctcaacggc 960
Query: 961 agcgagccggtgtcgccggcgtcgatgcgcaagttcttcgaagcatttgcgccgtacggt 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 agcgagccggtgtcgccggcgtcgatgcgcaagttcttcgaagcatttgcgccgtacggt 1020
Query: 1021 ttgaagcagaccgccgtcaagccgtcctatgggctagcggaggccacgctgttcgtctcg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 ttgaagcagaccgccgtcaagccgtcctatgggctagcggaggccacgctgttcgtctcg 1080
Query: 1081 accacgccgatggacgaggtgcccaccgtgatccacgtggaccgcgacgagctgaacaac 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 accacgccgatggacgaggtgcccaccgtgatccacgtggaccgcgacgagctgaacaac 1140
Query: 1141 cagcggttcgttgaggtggccgccgatgcacccaacgccgtcgcccaggtctctgcgggc 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 cagcggttcgttgaggtggccgccgatgcacccaacgccgtcgcccaggtctctgcgggc 1200
Query: 1201 aaggtcggggtcagcgaatgggcggtcatcgtcgacgccgacacggccagcgaactgccg 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 aaggtcggggtcagcgaatgggcggtcatcgtcgacgccgacacggccagcgaactgccg 1260
Query: 1261 gacggacagatcggtgagatctggctgcacggcaacaacttgggtaccggttattggggc 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 gacggacagatcggtgagatctggctgcacggcaacaacttgggtaccggttattggggc 1320
Query: 1321 aaagaagaagagtccgcccagaccttcaagaacatcctcaaatcgcggatcagcgagtcg 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 aaagaagaagagtccgcccagaccttcaagaacatcctcaaatcgcggatcagcgagtcg 1380
Query: 1381 cgcgccgagggcgccccagacgacgcgctgtgggtgcgtaccggcgactacggcacctac 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 cgcgccgagggcgccccagacgacgcgctgtgggtgcgtaccggcgactacggcacctac 1440
Query: 1441 ttcaaggaccacctctacatagccggccggatcaaggacctcgtcatcatcgacggccgc 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 ttcaaggaccacctctacatagccggccggatcaaggacctcgtcatcatcgacggccgc 1500
Query: 1501 aatcactacccacaggatctcgagtgcacggcgcaggagtcgaccaaggcgttgcgggtt 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 aatcactacccacaggatctcgagtgcacggcgcaggagtcgaccaaggcgttgcgggtt 1560
Query: 1561 ggctacgcggcggccttctcggttccggccaaccagcttcctcagacagtgttcgacgac 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 ggctacgcggcggccttctcggttccggccaaccagcttcctcagacagtgttcgacgac 1620
Query: 1621 tcgcacgccgggctgaaattcgaccccgaggacacctccgagcagctggtgatcgtcggc 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 tcgcacgccgggctgaaattcgaccccgaggacacctccgagcagctggtgatcgtcggc 1680
Query: 1681 gaacgggcggccggcacgcataagctcgaccaccagcccatcgtcgatgacatccgggcg 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 gaacgggcggccggcacgcataagctcgaccaccagcccatcgtcgatgacatccgggcg 1740
Query: 1741 gccatcgccgtcgggcatggggtgaccgtgcgtgacgtcctgctggtgtcggccggcacg 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 gccatcgccgtcgggcatggggtgaccgtgcgtgacgtcctgctggtgtcggccggcacg 1800
Query: 1801 attccgcgaacctccagcggcaagatcggccgccgcgcctgccgtgcggcctacctcgac 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 attccgcgaacctccagcggcaagatcggccgccgcgcctgccgtgcggcctacctcgac 1860
Query: 1861 ggcagcctgcgcagtggcgtgggttccccgacggtcttcgccacttcggactga 1914
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 ggcagcctgcgcagtggcgtgggttccccgacggtcttcgccacttcggactga 1914
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00168 98086 98568 len=483
(483 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_YP_178017.1 [gene=fbpD] [protein=secreted ... 957 0.0
>lcl|NC_000962.2_cdsid_YP_178017.1 [gene=fbpD] [protein=secreted
MPT51/MPB51 antigen protein FbpD]
[protein_id=YP_178017.1]
[location=complement(4264563..4265462)]
Length = 900
Score = 957 bits (483), Expect = 0.0
Identities = 483/483 (100%)
Strand = Plus / Minus
Query: 1 atgcacccacgggtcgtgccacttccaccgacccagctgtggtgctccccacattccgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 atgcacccacgggtcgtgccacttccaccgacccagctgtggtgctccccacattccgtt 586
Query: 61 ggtgtccacaccgccgaattgctgcatgcccgccgcgatcgcaccgttggtggtggtgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 ggtgtccacaccgccgaattgctgcatgcccgccgcgatcgcaccgttggtggtggtgtt 526
Query: 121 cgacgggtacaaaaagcccgacatcgagccagcgaagccgaagcggtcggggtggaaggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 cgacgggtacaaaaagcccgacatcgagccagcgaagccgaagcggtcggggtggaaggc 466
Query: 181 cgccagcgccatcgccccgtaaccgccctgagcggcgccaacggccgcatggccaccggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 cgccagcgccatcgccccgtaaccgccctgagcggcgccaacggccgcatggccaccggg 406
Query: 241 ggccaagccccggttagcggccagccagtcgggcagctcagcggacaagaaggtgtccca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ggccaagccccggttagcggccagccagtcgggcagctcagcggacaagaaggtgtccca 346
Query: 301 ctgcttgctgccatcctgctcccagttggtgtacatgctgtacgcaccaccggccggtgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ctgcttgctgccatcctgctcccagttggtgtacatgctgtacgcaccaccggccggtgc 286
Query: 361 caccaccgaaatccccttgcccgccaacgtgttcatcgcgttacccgcggtgacccagtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 caccaccgaaatccccttgcccgccaacgtgttcatcgcgttacccgcggtgacccagtt 226
Query: 421 actgacatccgggccggcgttgaaggcgtccagcagatacaccgcgtgcggcccaccggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 actgacatccgggccggcgttgaaggcgtccagcagatacaccgcgtgcggcccaccggc 166
Query: 481 tag 483
|||
Sbjct: 165 tag 163
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00169 98935 99069 len=135
(135 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218321.1 [gene=fbpA] [protein=secreted ... 268 9e-73
lcl|NC_000962.2_cdsid_NP_216402.1 [gene=fbpB] [protein=secreted ... 103 3e-23
>lcl|NC_000962.2_cdsid_NP_218321.1 [gene=fbpA] [protein=secreted
antigen 85-A FbpA] [protein_id=NP_218321.1]
[location=complement(4265642..4266658)]
Length = 1017
Score = 268 bits (135), Expect = 9e-73
Identities = 135/135 (100%)
Strand = Plus / Minus
Query: 1 gtgttgggcgtggcacccagtgcccgttgcaggtcgggcttcatagcgttgagctgcgcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 992 gtgttgggcgtggcacccagtgcccgttgcaggtcgggcttcatagcgttgagctgcgcg 933
Query: 61 ccccagtactcccagctgtgcgtaccgctgtccgggaagtcgaacacgccgttgtggccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 932 ccccagtactcccagctgtgcgtaccgctgtccgggaagtcgaacacgccgttgtggccg 873
Query: 121 ccaccggcgttgtag 135
|||||||||||||||
Sbjct: 872 ccaccggcgttgtag 858
>lcl|NC_000962.2_cdsid_NP_216402.1 [gene=fbpB] [protein=secreted
antigen 85-B FbpB] [protein_id=NP_216402.1]
[location=complement(2134890..2135867)]
Length = 978
Score = 103 bits (52), Expect = 3e-23
Identities = 85/96 (88%)
Strand = Plus / Minus
Query: 39 cttcatagcgttgagctgcgcgccccagtactcccagctgtgcgtaccgctgtccgggaa 98
|||||| ||||||||||| |||||||||||||||||||||||||| ||| || ||||||
Sbjct: 945 cttcatggcgttgagctgagcgccccagtactcccagctgtgcgtgccgttgggcgggaa 886
Query: 99 gtcgaacacgccgttgtggccgccaccggcgttgta 134
|| ||||||| ||||||| ||||| ||||||||||
Sbjct: 885 gttgaacacggcgttgtgcccgcccgcggcgttgta 850
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00170 99715 99494 len=222
(222 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218321.1 [gene=fbpA] [protein=secreted ... 440 e-124
lcl|NC_000962.2_cdsid_NP_216402.1 [gene=fbpB] [protein=secreted ... 202 8e-53
lcl|NC_000962.2_cdsid_YP_177694.1 [gene=fbpC] [protein=secreted ... 125 1e-29
>lcl|NC_000962.2_cdsid_NP_218321.1 [gene=fbpA] [protein=secreted
antigen 85-A FbpA] [protein_id=NP_218321.1]
[location=complement(4265642..4266658)]
Length = 1017
Score = 440 bits (222), Expect = e-124
Identities = 222/222 (100%)
Strand = Plus / Plus
Query: 1 gtggtggtgccaactcgcccgccctgtacctgctcgacggcctgcgcgcgcaggacgact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 gtggtggtgccaactcgcccgccctgtacctgctcgacggcctgcgcgcgcaggacgact 271
Query: 61 tcagcggctgggacatcaacaccccggcgttcgagtggtacgaccagtcgggcctgtcgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 tcagcggctgggacatcaacaccccggcgttcgagtggtacgaccagtcgggcctgtcgg 331
Query: 121 tggtcatgccggtgggtggccagtcaagcttctactccgactggtaccagcccgcctgcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tggtcatgccggtgggtggccagtcaagcttctactccgactggtaccagcccgcctgcg 391
Query: 181 gcaaggccggttgccagacttacaagtgggagaccttcctga 222
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gcaaggccggttgccagacttacaagtgggagaccttcctga 433
>lcl|NC_000962.2_cdsid_NP_216402.1 [gene=fbpB] [protein=secreted
antigen 85-B FbpB] [protein_id=NP_216402.1]
[location=complement(2134890..2135867)]
Length = 978
Score = 202 bits (102), Expect = 8e-53
Identities = 173/194 (89%), Gaps = 2/194 (1%)
Strand = Plus / Plus
Query: 30 ctgctcgacggcctgcgcgcgcaggacgacttcagcggctgggacatcaacaccccggcg 89
|||||||||||||||||||| || ||||||| || ||||||||| |||||||||||||||
Sbjct: 232 ctgctcgacggcctgcgcgcccaagacgactacaacggctgggatatcaacaccccggcg 291
Query: 90 ttcgagtggtacgaccagtcgggcctgtcggtggtcatgccggtgggtggccagtcaagc 149
|||||||||||| |||||||||| |||||| | ||||||||||| || || ||||| |||
Sbjct: 292 ttcgagtggtactaccagtcgggactgtcgatagtcatgccggtcggcgggcagtccagc 351
Query: 150 ttctactccgactggtaccagccc-gcctgcggcaaggccggttgccagacttacaagtg 208
|||||| ||||||||| |||||| |||||||| ||||| || |||||||||||||||||
Sbjct: 352 ttctacagcgactggta-cagcccggcctgcggtaaggctggctgccagacttacaagtg 410
Query: 209 ggagaccttcctga 222
||| ||||||||||
Sbjct: 411 ggaaaccttcctga 424
>lcl|NC_000962.2_cdsid_YP_177694.1 [gene=fbpC] [protein=secreted
antigen 85-C FbpC] [protein_id=YP_177694.1]
[location=complement(156578..157600)]
Length = 1023
Score = 125 bits (63), Expect = 1e-29
Identities = 126/147 (85%)
Strand = Plus / Plus
Query: 27 tacctgctcgacggcctgcgcgcgcaggacgacttcagcggctgggacatcaacaccccg 86
|||||||||||||| ||||| || ||||| |||| || ||||||||||||||||||||||
Sbjct: 241 tacctgctcgacggtctgcgggcccaggatgactacaacggctgggacatcaacaccccg 300
Query: 87 gcgttcgagtggtacgaccagtcgggcctgtcggtggtcatgccggtgggtggccagtca 146
|| |||||| |||| ||||||| || |||||||| ||||||| ||||| ||||| ||
Sbjct: 301 gccttcgaggagtactaccagtcagggttgtcggtgatcatgcccgtgggcggccaatcc 360
Query: 147 agcttctactccgactggtaccagccc 173
|| |||||| |||||||||| ||||||
Sbjct: 361 agtttctacaccgactggtatcagccc 387
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00175 101843 100221 len=1623
(1623 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218322.1 [gene=Rv3805c] [protein=transm... 3217 0.0
>lcl|NC_000962.2_cdsid_NP_218322.1 [gene=Rv3805c]
[protein=transmembrane protein] [protein_id=NP_218322.1]
[location=complement(4266953..4268836)]
Length = 1884
Score = 3217 bits (1623), Expect = 0.0
Identities = 1623/1623 (100%)
Strand = Plus / Plus
Query: 1 atggtgctttcgctgctgggaatggtgctgctcatgctggggaccggccggttgtacgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 atggtgctttcgctgctgggaatggtgctgctcatgctggggaccggccggttgtacgca 321
Query: 61 cccagcctgcggggccgtcgggcgatcatgcttccggccggggcgctggtatatatcgcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cccagcctgcggggccgtcgggcgatcatgcttccggccggggcgctggtatatatcgcg 381
Query: 121 gtgccaccggcccgcgacttcgccacctccggcctggagagcgggctggtgttggcctat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gtgccaccggcccgcgacttcgccacctccggcctggagagcgggctggtgttggcctat 441
Query: 181 ctggggctgttgtggtggatgatggtctgctggtcacagccgctgcgggcccgcccggac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ctggggctgttgtggtggatgatggtctgctggtcacagccgctgcgggcccgcccggac 501
Query: 241 agccagatgttcctcggcgcgttggccttcgtcgccggatgcagcgtgctagtgcggccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 agccagatgttcctcggcgcgttggccttcgtcgccggatgcagcgtgctagtgcggccg 561
Query: 301 gaattcgcgctgatcggcgggctggcgctgatcatgatgttgatcgccgcgcggacctgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gaattcgcgctgatcggcgggctggcgctgatcatgatgttgatcgccgcgcggacctgg 621
Query: 361 cgtcgccgcgtgctgatcgtgctggccggcggattcttgccggtggcctaccagatcttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 cgtcgccgcgtgctgatcgtgctggccggcggattcttgccggtggcctaccagatcttc 681
Query: 421 cggatgggctattacggactgctggttccgagtaccgcgctggccaaggatgccgcgggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 cggatgggctattacggactgctggttccgagtaccgcgctggccaaggatgccgcgggc 741
Query: 481 gacaagtggtcgcaaggcatgatctacgtgtcgaacttcaaccggccgtacgcactgtgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 gacaagtggtcgcaaggcatgatctacgtgtcgaacttcaaccggccgtacgcactgtgg 801
Query: 541 gtgccgttggtgctgtcggtgccgctgggattgctgttgatgacggcgcgccgccggccg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 gtgccgttggtgctgtcggtgccgctgggattgctgttgatgacggcgcgccgccggccg 861
Query: 601 tcgttcctgcgtcccgtgctggcacccgactacggtcgggtggcccgggcggtgcaaagt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 tcgttcctgcgtcccgtgctggcacccgactacggtcgggtggcccgggcggtgcaaagt 921
Query: 661 ccgccggccgtggtggctttcatcgtcggcagcggcgtgctgcaggcgctgtactggatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922 ccgccggccgtggtggctttcatcgtcggcagcggcgtgctgcaggcgctgtactggatt 981
Query: 721 cggcaaggcggcgactttatgcacggccgggtgttgctggcgccgctgttttgtttgctg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 982 cggcaaggcggcgactttatgcacggccgggtgttgctggcgccgctgttttgtttgctg 1041
Query: 781 gccccggtgggggtcattcctattttgctgcccgacggtaaggacttttcgcgggagacc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1042 gccccggtgggggtcattcctattttgctgcccgacggtaaggacttttcgcgggagacc 1101
Query: 841 ggtcgctggctagtcggcgcgctcagcgggctctggctggggatcgcgggttggtcgctg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1102 ggtcgctggctagtcggcgcgctcagcgggctctggctggggatcgcgggttggtcgctg 1161
Query: 901 tgggcggcaaactcgccgggcatgggtgacgacgccacccgggtcacctattcgggcatc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1162 tgggcggcaaactcgccgggcatgggtgacgacgccacccgggtcacctattcgggcatc 1221
Query: 961 gtcgacgagcgccgcttctacgcccaggccaccgggcacgcgcatccgctgaccgccgcg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1222 gtcgacgagcgccgcttctacgcccaggccaccgggcacgcgcatccgctgaccgccgcg 1281
Query: 1021 gactacctcgattacccgcgaatggctgccgtgcttacagcgctcaacaacaccccggaa 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1282 gactacctcgattacccgcgaatggctgccgtgcttacagcgctcaacaacaccccggaa 1341
Query: 1081 ggggcgttgctattgccgtcgggcaactacaaccagtgggacctggtgccgatgatccgg 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1342 ggggcgttgctattgccgtcgggcaactacaaccagtgggacctggtgccgatgatccgg 1401
Query: 1141 ccctcgtcggggaccgcgccgggtggcaagccggcgccgaaaccgcagcacgcagtgttt 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1402 ccctcgtcggggaccgcgccgggtggcaagccggcgccgaaaccgcagcacgcagtgttt 1461
Query: 1201 ttcaccaacatgggcatgctaggcatgaacgtcgggctcgatgtccgggtgatcgaccaa 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1462 ttcaccaacatgggcatgctaggcatgaacgtcgggctcgatgtccgggtgatcgaccaa 1521
Query: 1261 atcgggctggtaaacccattggccgcgcacaccgagcggctgaagcatgcccgtatcggc 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1522 atcgggctggtaaacccattggccgcgcacaccgagcggctgaagcatgcccgtatcggc 1581
Query: 1321 catgacaagaatctgttcccggactgggtgatcgccgacggaccctgggtgaagtggtac 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1582 catgacaagaatctgttcccggactgggtgatcgccgacggaccctgggtgaagtggtac 1641
Query: 1381 ccgggtattcccggctacatcgaccagcagtgggtcacgcaagccgaagcggccctgcaa 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1642 ccgggtattcccggctacatcgaccagcagtgggtcacgcaagccgaagcggccctgcaa 1701
Query: 1441 tgccccgcgactcgggcggtgcttaattctgtgcgcgccccgatcaccctgcaccgattc 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1702 tgccccgcgactcgggcggtgcttaattctgtgcgcgccccgatcaccctgcaccgattc 1761
Query: 1501 ctctccaacgtgttgcattcctacgagttcacccgttaccgcatcgaccgcgttccgcgc 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1762 ctctccaacgtgttgcattcctacgagttcacccgttaccgcatcgaccgcgttccgcgc 1821
Query: 1561 tatgaattggtccggtgtgggctcgatgttcccgacgggcccggcccgccaccgcgggag 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1822 tatgaattggtccggtgtgggctcgatgttcccgacgggcccggcccgccaccgcgggag 1881
Query: 1621 tga 1623
|||
Sbjct: 1882 tga 1884
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00182 101842 103263 len=1422
(1422 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218323.1 [gene=Rv3806c] [protein=phosph... 1802 0.0
lcl|NC_000962.2_cdsid_NP_218322.1 [gene=Rv3805c] [protein=transm... 521 e-148
lcl|NC_000962.2_cdsid_NP_218324.1 [gene=Rv3807c] [protein=transm... 309 3e-84
>lcl|NC_000962.2_cdsid_NP_218323.1 [gene=Rv3806c]
[protein=phosphoribose diphosphate:decaprenyl-phosphate
phosphoribosyltransferase] [protein_id=NP_218323.1]
[location=complement(4268925..4269833)]
Length = 909
Score = 1802 bits (909), Expect = 0.0
Identities = 909/909 (100%)
Strand = Plus / Minus
Query: 352 ctagccgaaggcaacagcggccccaaccgttgctatccacgccagcgccagcagctgcaa 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909 ctagccgaaggcaacagcggccccaaccgttgctatccacgccagcgccagcagctgcaa 850
Query: 412 tacccggtcacgcagcgcgatatcttccggctccccggccaggccgccatcgacgtccac 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 tacccggtcacgcagcgcgatatcttccggctccccggccaggccgccatcgacgtccac 790
Query: 472 cgcgtagcgcaggatcgcgatggtgaacggaatcatcgacaccgcgaaccaggacccgct 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 cgcgtagcgcaggatcgcgatggtgaacggaatcatcgacaccgcgaaccaggacccgct 730
Query: 532 gtagccgtcgcgctcgaaagcccacagcccgtagcacaagaccaccgcggtggccgacaa 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 gtagccgtcgcgctcgaaagcccacagcccgtagcacaagaccaccgcggtggccgacaa 670
Query: 592 cgtccagacgaaccgcagataggtgctggtgtagctttccagcgacttgcggatcgcagc 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 cgtccagacgaaccgcagataggtgctggtgtagctttccagcgacttgcggatcgcagc 610
Query: 652 gccggtgcgttcggccagatgcagctcggcgtagcgcttgccggccaccatgaacagcga 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 gccggtgcgttcggccagatgcagctcggcgtagcgcttgccggccaccatgaacagcga 550
Query: 712 accgaatgccatgatcagcaaaaaccacttggacagcgggattttggtggccacgccccc 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 accgaatgccatgatcagcaaaaaccacttggacagcgggattttggtggccacgccccc 490
Query: 772 ggcgatggcgcggatcaaatacgccgacgacacgacgcagatttccaccaccgcttgatg 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ggcgatggcgcggatcaaatacgccgacgacacgacgcagatttccaccaccgcttgatg 430
Query: 832 cttgagaccaaagcaatacgccaactgcatggcgaggtagacgaccattaccagcgccag 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 cttgagaccaaagcaatacgccaactgcatggcgaggtagacgaccattaccagcgccag 370
Query: 892 gttcggggtcagcatccaggcaccggccagcgatgtcactcccagtaccaccgccacggt 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gttcggggtcagcatccaggcaccggccagcgatgtcactcccagtaccaccgccacggt 310
Query: 952 gtacgccagccactcgggcaccacgccggcggcgatcggccggaaccttttggtggggtg 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gtacgccagccactcgggcaccacgccggcggcgatcggccggaaccttttggtggggtg 250
Query: 1012 ctcccggtctgcctcgacgtcacgcacatcgttgacgaggtacaccgccgaggcggccag 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ctcccggtctgcctcgacgtcacgcacatcgttgacgaggtacaccgccgaggcggccag 190
Query: 1072 gctgaacaccacgaaggccatcgacaccttgctgagcacctcgacgtagtcgtagcggac 1131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gctgaacaccacgaaggccatcgacaccttgctgagcacctcgacgtagtcgtagcggac 130
Query: 1132 accgccgcccaacgcggccagcggcgcggccagcaccagcacgtttttcacccactggcg 1191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 accgccgcccaacgcggccagcggcgcggccagcaccagcacgtttttcacccactggcg 70
Query: 1192 cgggcggatcgccttgaccaccccggcgaccaggtttgccggaggttgagtcaccacatc 1251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 cgggcggatcgccttgaccaccccggcgaccaggtttgccggaggttgagtcaccacatc 10
Query: 1252 ttcactcat 1260
|||||||||
Sbjct: 9 ttcactcat 1
>lcl|NC_000962.2_cdsid_NP_218322.1 [gene=Rv3805c]
[protein=transmembrane protein] [protein_id=NP_218322.1]
[location=complement(4266953..4268836)]
Length = 1884
Score = 521 bits (263), Expect = e-148
Identities = 263/263 (100%)
Strand = Plus / Minus
Query: 1 atggccagggccaacgccacgtactccaggcgcatcggcccgcccacccagccgcccaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 atggccagggccaacgccacgtactccaggcgcatcggcccgcccacccagccgcccaca 204
Query: 61 tacagcagatacgtccacgctgtcgaggtgttcgcttcgactcgctcgccctggttgaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tacagcagatacgtccacgctgtcgaggtgttcgcttcgactcgctcgccctggttgaag 144
Query: 121 accggtccgttgccggccaataggttgcgtaccgtccgcaggacgatcagtccgtcgtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 accggtccgttgccggccaataggttgcgtaccgtccgcaggacgatcagtccgtcgtca 84
Query: 181 gcgatccagcgacgttgccagctcccccagccgaacagcacggcgaccgccgtcaccgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 gcgatccagcgacgttgccagctcccccagccgaacagcacggcgaccgccgtcaccgac 24
Query: 241 agccacaagctgacccggaccat 263
|||||||||||||||||||||||
Sbjct: 23 agccacaagctgacccggaccat 1
>lcl|NC_000962.2_cdsid_NP_218324.1 [gene=Rv3807c]
[protein=transmembrane protein] [protein_id=NP_218324.1]
[location=complement(4269840..4270337)]
Length = 498
Score = 309 bits (156), Expect = 3e-84
Identities = 156/156 (100%)
Strand = Plus / Minus
Query: 1267 tcatctcttccgggccctttgccggcccccgccgacgctgtccacgatggccccgacggt 1326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tcatctcttccgggccctttgccggcccccgccgacgctgtccacgatggccccgacggt 439
Query: 1327 ggcgcccagagcaacacccacggccacatcactggggtagtggacccccagcagtattcg 1386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ggcgcccagagcaacacccacggccacatcactggggtagtggacccccagcagtattcg 379
Query: 1387 cgacagcgccatcggcggcaccagcacaaccggtag 1422
||||||||||||||||||||||||||||||||||||
Sbjct: 378 cgacagcgccatcggcggcaccagcacaaccggtag 343
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00187 105583 105690 len=108
(108 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218326.1 [gene=glf] [protein=UDP-galact... 214 9e-57
>lcl|NC_000962.2_cdsid_NP_218326.1 [gene=glf]
[protein=UDP-galactopyranose mutase Glf]
[protein_id=NP_218326.1]
[location=complement(4272276..4273475)]
Length = 1200
Score = 214 bits (108), Expect = 9e-57
Identities = 108/108 (100%)
Strand = Plus / Minus
Query: 1 atgcggcgcgaggacgttgtcgtacatgttcaaggcgctggcaatggccatatgcatatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1161 atgcggcgcgaggacgttgtcgtacatgttcaaggcgctggcaatggccatatgcatatc 1102
Query: 61 cagatattggtaggtgcccaaccggccgccgaacagtaccttcgatga 108
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1101 cagatattggtaggtgcccaaccggccgccgaacagtaccttcgatga 1054
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00188 105547 103634 len=1914
(1914 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218325.1 [gene=glfT] [protein=bifunctio... 3794 0.0
>lcl|NC_000962.2_cdsid_NP_218325.1 [gene=glfT] [protein=bifunctional
UDP-galactofuranosyl transferase GLFT]
[protein_id=NP_218325.1]
[location=complement(4270366..4272279)]
Length = 1914
Score = 3794 bits (1914), Expect = 0.0
Identities = 1914/1914 (100%)
Strand = Plus / Plus
Query: 1 atgagtgaactcgccgcgagcctgctgtctcgggtcatcctgccgcgcccaggtgaaccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgagtgaactcgccgcgagcctgctgtctcgggtcatcctgccgcgcccaggtgaaccc 60
Query: 61 cttgacgtgcgcaagctgtacctcgaggagtcaacgaccaacgcccggcgcgcgcatgcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttgacgtgcgcaagctgtacctcgaggagtcaacgaccaacgcccggcgcgcgcatgcg 120
Query: 121 ccaacccggacctcgctacagattggcgcggagtccgaggtgtcgttcgccacctacttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccaacccggacctcgctacagattggcgcggagtccgaggtgtcgttcgccacctacttc 180
Query: 181 aacgctttcccggctagctattggcgacgttggacgacgtgcaaatcggtggtgttgcgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aacgctttcccggctagctattggcgacgttggacgacgtgcaaatcggtggtgttgcgc 240
Query: 241 gtgcaggtgaccggcgccgggcgggtagacgtctaccggaccaaggccaccggtgcccgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtgcaggtgaccggcgccgggcgggtagacgtctaccggaccaaggccaccggtgcccgg 300
Query: 301 atcttcgttgagggccacgacttcaccggcaccgaggatcagccagccgccgtggagacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atcttcgttgagggccacgacttcaccggcaccgaggatcagccagccgccgtggagacc 360
Query: 361 gaagtggtgctgcagcctttcgaagacggcgggtgggtctggttcgacatcaccaccgac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaagtggtgctgcagcctttcgaagacggcgggtgggtctggttcgacatcaccaccgac 420
Query: 421 accgcggtcaccctgcacagtggtggctggtatgccaccagccccgctccggggacggcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 accgcggtcaccctgcacagtggtggctggtatgccaccagccccgctccggggacggcc 480
Query: 481 aacatcgcggtcggcatcccgacgttcaaccgccccgcagactgcgtcaacgcgctgcga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aacatcgcggtcggcatcccgacgttcaaccgccccgcagactgcgtcaacgcgctgcga 540
Query: 541 gaactcaccgccgatccgctggtggaccaggtgatcggggcggtgatcgtgcctgatcag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaactcaccgccgatccgctggtggaccaggtgatcggggcggtgatcgtgcctgatcag 600
Query: 601 ggtgagcgcaaggtgcgcgaccacccggatttccccgccgcggctgcgagattgggtagt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ggtgagcgcaaggtgcgcgaccacccggatttccccgccgcggctgcgagattgggtagt 660
Query: 661 cggctctccatccacgaccagcccaacctgggcggttccggcggctacagccgggtgatg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cggctctccatccacgaccagcccaacctgggcggttccggcggctacagccgggtgatg 720
Query: 721 tatgaggcactgaaaaacaccgactgtcagcagatcctattcatggacgacgacatccgc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tatgaggcactgaaaaacaccgactgtcagcagatcctattcatggacgacgacatccgc 780
Query: 781 ctcgagccggactcgattctgcgggtgctggccatgcaccggttcgccaaggcgccgatg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ctcgagccggactcgattctgcgggtgctggccatgcaccggttcgccaaggcgccgatg 840
Query: 841 ctggtgggtggtcagatgctcaacctgcaggagccgtcgcacctgcacatcatgggcgaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ctggtgggtggtcagatgctcaacctgcaggagccgtcgcacctgcacatcatgggcgaa 900
Query: 901 gtcgtagaccggtcgatattcatgtggaccgccgcgccgcatgccgagtatgaccacgac 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gtcgtagaccggtcgatattcatgtggaccgccgcgccgcatgccgagtatgaccacgac 960
Query: 961 ttcgccgaatacccgttgaacgacaacaactcccgtagcaagttgctgcaccggcgtatc 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ttcgccgaatacccgttgaacgacaacaactcccgtagcaagttgctgcaccggcgtatc 1020
Query: 1021 gatgtcgactacaacggctggtggacgtgcatgatcccacgccaggtcgccgaagagcta 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gatgtcgactacaacggctggtggacgtgcatgatcccacgccaggtcgccgaagagcta 1080
Query: 1081 ggacagccgctgccgttgttcatcaaatgggacgacgccgattacggcctgcgggccgcc 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ggacagccgctgccgttgttcatcaaatgggacgacgccgattacggcctgcgggccgcc 1140
Query: 1141 gagcacgggtatccgaccgtcacgctgcccggtgcggcgatctggcacatggcctggagc 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gagcacgggtatccgaccgtcacgctgcccggtgcggcgatctggcacatggcctggagc 1200
Query: 1201 gataaggatgacgccatcgactggcaggcctatttccatctgcgcaaccggctggtggtg 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 gataaggatgacgccatcgactggcaggcctatttccatctgcgcaaccggctggtggtg 1260
Query: 1261 gccgccatgcactgggacggcccaaaggcgcaagtcatcggcctggtccgcagccatctc 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 gccgccatgcactgggacggcccaaaggcgcaagtcatcggcctggtccgcagccatctc 1320
Query: 1321 aaggcaaccctgaaacaccttgcctgcctggaatattcgacggtggcaatccagaacaag 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 aaggcaaccctgaaacaccttgcctgcctggaatattcgacggtggcaatccagaacaag 1380
Query: 1381 gccatcgacgactttctcgccggccccgagcacatcttttcgatcctggaatcggcgctg 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 gccatcgacgactttctcgccggccccgagcacatcttttcgatcctggaatcggcgctg 1440
Query: 1441 ccgcaagtgcaccgcatccgcaagagctatccggacgcggtggtgctgccggcggccagt 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 ccgcaagtgcaccgcatccgcaagagctatccggacgcggtggtgctgccggcggccagt 1500
Query: 1501 gagttgccgccgccgttgcacaagaacaaggcaatgaagccgccggtgaacccgttggtc 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 gagttgccgccgccgttgcacaagaacaaggcaatgaagccgccggtgaacccgttggtc 1560
Query: 1561 atcggctaccggctggcccgcgggatcatgcacaacctgaccgccgccaacccccaacac 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 atcggctaccggctggcccgcgggatcatgcacaacctgaccgccgccaacccccaacac 1620
Query: 1621 caccgtcgcccggagttcaacgttccgacccaggatgcgcgctggttcctgctgtgcact 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 caccgtcgcccggagttcaacgttccgacccaggatgcgcgctggttcctgctgtgcact 1680
Query: 1681 gtcgacggggccaccgtcaccacggccgacggatgcggcgtggtctaccggcagcgcgac 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 gtcgacggggccaccgtcaccacggccgacggatgcggcgtggtctaccggcagcgcgac 1740
Query: 1741 cgggccaagatgttcgcgttgctgtggcagtcgttgcgccgtcagcgccagttgctgaaa 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 cgggccaagatgttcgcgttgctgtggcagtcgttgcgccgtcagcgccagttgctgaaa 1800
Query: 1801 cggttcgaggagatgcgccggatttatcgcgacgcgttgccgacgctgtccagcaagcag 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 cggttcgaggagatgcgccggatttatcgcgacgcgttgccgacgctgtccagcaagcag 1860
Query: 1861 aagtgggagacggcgctgctgccggcggcaaaccaagagcccgagcatggctga 1914
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 aagtgggagacggcgctgctgccggcggcaaaccaagagcccgagcatggctga 1914
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00192 108024 109685 len=1662
(1662 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_YP_178018.1 [gene=Rv3811] [protein=hypothe... 3211 0.0
>lcl|NC_000962.2_cdsid_YP_178018.1 [gene=Rv3811] [protein=hypothetical
protein] [protein_id=YP_178018.1]
[location=4274798..4276417]
Length = 1620
Score = 3211 bits (1620), Expect = 0.0
Identities = 1620/1620 (100%)
Strand = Plus / Plus
Query: 43 atggcagcgaccgtcgtcatcgtcgcgtggatagcgaatcgtccacccgccagctcccat 102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggcagcgaccgtcgtcatcgtcgcgtggatagcgaatcgtccacccgccagctcccat 60
Query: 103 gaaccatcgccgacgcccaacacccagctcgccgagcagccactgatcgggctcggcggc 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaaccatcgccgacgcccaacacccagctcgccgagcagccactgatcgggctcggcggc 120
Query: 163 ggcgtcacggtacgcgaactcacccaggacacaccgttttcattggtggcgttgactggc 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggcgtcacggtacgcgaactcacccaggacacaccgttttcattggtggcgttgactggc 180
Query: 223 gacctggccggtacctccgctcgtgtgcgcgccaagcgcccggacggtgactgggggccg 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gacctggccggtacctccgctcgtgtgcgcgccaagcgcccggacggtgactgggggccg 240
Query: 283 tggtatcagaccgagtatgaaaccgaaccacgcgatccggcgggcaccgacgggtccgtg 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggtatcagaccgagtatgaaaccgaaccacgcgatccggcgggcaccgacgggtccgtg 300
Query: 343 gaacttggaggactcaatccgggtccccgtagcaccgatccggtgttcgtgggcaccacc 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaacttggaggactcaatccgggtccccgtagcaccgatccggtgttcgtgggcaccacc 360
Query: 403 accaccgtgcaggtcgcggtgactcgcccgatcgacgcaccgataactcaaccgccggcg 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 accaccgtgcaggtcgcggtgactcgcccgatcgacgcaccgataactcaaccgccggcg 420
Query: 463 gggcggccgcccaacgacttgctcgacagcggtttgggataccgtccagccaccaaggaa 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gggcggccgcccaacgacttgctcgacagcggtttgggataccgtccagccaccaaggaa 480
Query: 523 cagccattcgggcagaacatctccgcgatcctgatctcgccgccgcaagcgccgcccgga 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cagccattcgggcagaacatctccgcgatcctgatctcgccgccgcaagcgccgcccgga 540
Query: 583 acgcagtggacgccaccaaccgcagtcaccatggcaggccagccgccggccatcatcagc 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acgcagtggacgccaccaaccgcagtcaccatggcaggccagccgccggccatcatcagc 600
Query: 643 cgggcggaatggggcgcagacgagtcactgcgatgcgaaacaccggagtacgacaggggg 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cgggcggaatggggcgcagacgagtcactgcgatgcgaaacaccggagtacgacaggggg 660
Query: 703 gttcgtgccgcggtggtccaccacaccgcggggagcaacgactactctccgctggagtcc 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gttcgtgccgcggtggtccaccacaccgcggggagcaacgactactctccgctggagtcc 720
Query: 763 gccggcatagtcaaagccatctacacttaccacagcaagaccctgggctggtgtgacatc 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gccggcatagtcaaagccatctacacttaccacagcaagaccctgggctggtgtgacatc 780
Query: 823 gcgtacaacgccctcgtcgacaagtacggccaggtgttcgagggtagcgccggcggcctc 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gcgtacaacgccctcgtcgacaagtacggccaggtgttcgagggtagcgccggcggcctc 840
Query: 883 accaagccggtcgaagggttccacaccggcggattcaaccgcaacacctggggggttgcc 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 accaagccggtcgaagggttccacaccggcggattcaaccgcaacacctggggggttgcc 900
Query: 943 atgatcggcaacttcgacgatgtggcccccacgccgatccagatccgaaccgtcggccgg 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 atgatcggcaacttcgacgatgtggcccccacgccgatccagatccgaaccgtcggccgg 960
Query: 1003 ctgctcggctggcggctgggcatggacgacgtcgatcccaggagcatggtggatctgcag 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ctgctcggctggcggctgggcatggacgacgtcgatcccaggagcatggtggatctgcag 1020
Query: 1063 tcagcgggtagctcgtacaccacgtttccgggtggcgccatagcgcgattgcccgccatc 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 tcagcgggtagctcgtacaccacgtttccgggtggcgccatagcgcgattgcccgccatc 1080
Query: 1123 ttcacccatcgcgacgtcggcaacaccgactgtccgggcaacgccgcctacgctgtgatg 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ttcacccatcgcgacgtcggcaacaccgactgtccgggcaacgccgcctacgctgtgatg 1140
Query: 1183 gacgagatccgggacatcgcagcacatttcaacgacccgccggaggagctgatcaaggcg 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gacgagatccgggacatcgcagcacatttcaacgacccgccggaggagctgatcaaggcg 1200
Query: 1243 ctggaaggcggcgcgatctatcagcgctggcaggcgttgggcggcatgaacagcgcgctg 1302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ctggaaggcggcgcgatctatcagcgctggcaggcgttgggcggcatgaacagcgcgctg 1260
Query: 1303 ggtgcaccgacctcgccggaggccgacgccgcggatggggcgcggtatgcaaccttcgct 1362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 ggtgcaccgacctcgccggaggccgacgccgcggatggggcgcggtatgcaaccttcgct 1320
Query: 1363 aagggcgccatgtattggtcgccggtgaccgacgctcagccgatcacgggggcaatctat 1422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 aagggcgccatgtattggtcgccggtgaccgacgctcagccgatcacgggggcaatctat 1380
Query: 1423 gaggcctgggcttcgcagagctacgaacgcggcccgctgggactgccgaccagcgcggag 1482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 gaggcctgggcttcgcagagctacgaacgcggcccgctgggactgccgaccagcgcggag 1440
Query: 1483 atccaggagccgctgcagatcacgcagaactttcaacacggaaccttgaacttcgagcgc 1542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 atccaggagccgctgcagatcacgcagaactttcaacacggaaccttgaacttcgagcgc 1500
Query: 1543 ctcaccggcaatgtcaccgaagtcgtcgacgggatcacgacgccactggcgacgcggccc 1602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 ctcaccggcaatgtcaccgaagtcgtcgacgggatcacgacgccactggcgacgcggccc 1560
Query: 1603 ccgagcggcccgacggtgccgcccgaacacttcacgctgccaacgcatccgatcacctga 1662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 ccgagcggcccgacggtgccgcccgaacacttcacgctgccaacgcatccgatcacctga 1620
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00195 109839 111353 len=1515
(1515 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_YP_178019.1 [gene=PE_PGRS62] [protein=PE-P... 3003 0.0
>lcl|NC_000962.2_cdsid_YP_178019.1 [gene=PE_PGRS62] [protein=PE-PGRS
family protein] [protein_id=YP_178019.1]
[location=4276571..4278085]
Length = 1515
Score = 3003 bits (1515), Expect = 0.0
Identities = 1515/1515 (100%)
Strand = Plus / Plus
Query: 1 gtgtcgttcgtggtcacagtgccggaggccgtggcggctgcggcgggggatttggcggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgtcgttcgtggtcacagtgccggaggccgtggcggctgcggcgggggatttggcggcc 60
Query: 61 atcggctcgacgcttcgggaagcgaccgctgcggcggcgggccccacgaccgggctggcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcggctcgacgcttcgggaagcgaccgctgcggcggcgggccccacgaccgggctggcg 120
Query: 121 gccgcggccgccgacgacgtgtcgatcgctgtctcgcagctgttcggcaggtacggccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gccgcggccgccgacgacgtgtcgatcgctgtctcgcagctgttcggcaggtacggccag 180
Query: 181 gaatttcaaaccgtgagcaaccaactggccgcgtttcataccgagttcgtacgcacgttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaatttcaaaccgtgagcaaccaactggccgcgtttcataccgagttcgtacgcacgttg 240
Query: 241 aaccgcggcgcggcggcgtatctcaacaccgaaagcgctaacggcgggcagctgttcggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaccgcggcgcggcggcgtatctcaacaccgaaagcgctaacggcgggcagctgttcggt 300
Query: 301 cagatcgaggcgggacagcgcgccgtttccgcggccgcggccgccgctccgggcggcgca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cagatcgaggcgggacagcgcgccgtttccgcggccgcggccgccgctccgggcggcgca 360
Query: 361 tacggccaactcgttgccaacacggccaccaacctggaatccctctacggcgcatggtcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tacggccaactcgttgccaacacggccaccaacctggaatccctctacggcgcatggtcg 420
Query: 421 gccaacccgttcccattcctccgccagatcatcgccaaccagcaggtttactggcagcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gccaacccgttcccattcctccgccagatcatcgccaaccagcaggtttactggcagcag 480
Query: 481 atcgccgcggcgctcgccaacgccgtccagaacttccccgccctggtggcgaatttgcca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atcgccgcggcgctcgccaacgccgtccagaacttccccgccctggtggcgaatttgcca 540
Query: 541 gcggccatcgacgcggccgtccagcaattcctggccttcaacgcggcgtactacatccaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gcggccatcgacgcggccgtccagcaattcctggccttcaacgcggcgtactacatccaa 600
Query: 601 cagattattagctcgcagatcggcttcgcccagctattcgccacgacggtcggtcagggg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cagattattagctcgcagatcggcttcgcccagctattcgccacgacggtcggtcagggg 660
Query: 661 gtcaccagcgtcattgccgggtggcccaaccttgcggcggagcttcagctagcgtttcaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gtcaccagcgtcattgccgggtggcccaaccttgcggcggagcttcagctagcgtttcaa 720
Query: 721 cagcttctggtgggtgactacaacgccgcggtggcgaacctgggtaaggccatgacaaac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cagcttctggtgggtgactacaacgccgcggtggcgaacctgggtaaggccatgacaaac 780
Query: 781 cttctggtcaccgggttcgacaccagcgacgtgacgatcggcacaatgggcaccaccatt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 cttctggtcaccgggttcgacaccagcgacgtgacgatcggcacaatgggcaccaccatt 840
Query: 841 agtgtcaccgcgaaacccaagctgctgggcccgctgggagatctgttcaccatcatgacc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 agtgtcaccgcgaaacccaagctgctgggcccgctgggagatctgttcaccatcatgacc 900
Query: 901 atcccggcacaagaggcgcagtacttcaccaacctgatgcccccctccatcctgcgagac 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 atcccggcacaagaggcgcagtacttcaccaacctgatgcccccctccatcctgcgagac 960
Query: 961 atgtcgcagaacttcaccaacgtgctcacgacgctctccaacccgaacatccaggcggtc 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 atgtcgcagaacttcaccaacgtgctcacgacgctctccaacccgaacatccaggcggtc 1020
Query: 1021 gcttcgttcgatatcgcaaccaccgccgggactttgagcaccttcttcggggtgccattg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gcttcgttcgatatcgcaaccaccgccgggactttgagcaccttcttcggggtgccattg 1080
Query: 1081 gtgctcacttacgccacattgggtgcgccgttcgcgtcactgaacgcgattgcgacgagc 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gtgctcacttacgccacattgggtgcgccgttcgcgtcactgaacgcgattgcgacgagc 1140
Query: 1141 gcggaaaccatcgagcaggccctgttggccggcaactacctaggggcggtgggtgcgctt 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gcggaaaccatcgagcaggccctgttggccggcaactacctaggggcggtgggtgcgctt 1200
Query: 1201 atcgacgccccggcccacgcgttagacggcttcctcaacagcgcaaccgtgttggatacg 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 atcgacgccccggcccacgcgttagacggcttcctcaacagcgcaaccgtgttggatacg 1260
Query: 1261 ccgatcctggtgcccacggggctcccgtcccctctgcccccgacggtcgggatcacgctg 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 ccgatcctggtgcccacggggctcccgtcccctctgcccccgacggtcgggatcacgctg 1320
Query: 1321 cacttgcctttcgacgggattctcgtgccgccgcatcccgtcaccgcgacgatcagcttc 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 cacttgcctttcgacgggattctcgtgccgccgcatcccgtcaccgcgacgatcagcttc 1380
Query: 1381 ccgggtgctccggttcctattcccggtttcccaaccaccgtaaccgttttcggcacaccc 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 ccgggtgctccggttcctattcccggtttcccaaccaccgtaaccgttttcggcacaccc 1440
Query: 1441 ttcatgggaatggctccgctgctgatcaactacattccccaacagctcgccctggcaatc 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 ttcatgggaatggctccgctgctgatcaactacattccccaacagctcgccctggcaatc 1500
Query: 1501 aaaccggcggcttag 1515
|||||||||||||||
Sbjct: 1501 aaaccggcggcttag 1515
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00196 111502 111350 len=153
(153 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00204 114709 117267 len=2559
(2559 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218335.1 [gene=Rv3818] [protein=hypothe... 3075 0.0
lcl|NC_000962.2_cdsid_NP_218334.1 [gene=Rv3817] [protein=phospho... 1499 0.0
lcl|NC_000962.2_cdsid_NP_218333.1 [gene=Rv3816c] [protein=acyltr... 260 5e-69
>lcl|NC_000962.2_cdsid_NP_218335.1 [gene=Rv3818] [protein=hypothetical
protein] [protein_id=NP_218335.1]
[location=4282449..4283999]
Length = 1551
Score = 3075 bits (1551), Expect = 0.0
Identities = 1551/1551 (100%)
Strand = Plus / Plus
Query: 1009 gtgcaggtcacaagcgttggtcacgccggctttctgatccagacccaggccggcagcatc 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgcaggtcacaagcgttggtcacgccggctttctgatccagacccaggccggcagcatc 60
Query: 1069 ctgtgcgacccttgggtcaatccggcctactttgcgtcttggtttccgttccccgacaac 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgtgcgacccttgggtcaatccggcctactttgcgtcttggtttccgttccccgacaac 120
Query: 1129 agcgggctggactggggcgctttgggtgagtgcgattatctgtatgtctcgcacctacat 1188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agcgggctggactggggcgctttgggtgagtgcgattatctgtatgtctcgcacctacat 180
Query: 1189 aaggaccacttcgacgcggaaaatctacgagcgcacgtcaacaaggacgccgtcgtgctg 1248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaggaccacttcgacgcggaaaatctacgagcgcacgtcaacaaggacgccgtcgtgctg 240
Query: 1249 ctgcccgactttccggtacccgacctgcgaaatgagttgcagaagttaggatttcatcgg 1308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctgcccgactttccggtacccgacctgcgaaatgagttgcagaagttaggatttcatcgg 300
Query: 1309 ttcttcgaaaccaccgactcggtcaaacaccgcctgaggggacccaacggcgatctcgac 1368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttcttcgaaaccaccgactcggtcaaacaccgcctgaggggacccaacggcgatctcgac 360
Query: 1369 gtgatgatcatcgcactgcgggcccccgccgacggtccgatcggcgactcggcgctagtc 1428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtgatgatcatcgcactgcgggcccccgccgacggtccgatcggcgactcggcgctagtc 420
Query: 1429 gttgccgacggcgaaacaacggctttcaacatgaacgacgcccgcccggtcgatttggac 1488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gttgccgacggcgaaacaacggctttcaacatgaacgacgcccgcccggtcgatttggac 480
Query: 1489 gtgctggcatcggagttcggtcacatcgacgtgcatatgctgcagtactcgggcgcgatc 1548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtgctggcatcggagttcggtcacatcgacgtgcatatgctgcagtactcgggcgcgatc 540
Query: 1549 tggtacccgatggtctacgacatgccggcgcgcgcgaaggatgcgttcggcgcccaaaag 1608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tggtacccgatggtctacgacatgccggcgcgcgcgaaggatgcgttcggcgcccaaaag 600
Query: 1609 cggcaacggcagatggaccgtgctcgccagtacatcgcgcaggtgggagcgacgtgggtg 1668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cggcaacggcagatggaccgtgctcgccagtacatcgcgcaggtgggagcgacgtgggtg 660
Query: 1669 gtgccgtcggcggggccgccatgctttttagcccccgagctgcgccacctcaacgacgac 1728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gtgccgtcggcggggccgccatgctttttagcccccgagctgcgccacctcaacgacgac 720
Query: 1729 ggtagcgatccggccaatatcttccccgaccagatggtgttcctggatcagatgcgggcg 1788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ggtagcgatccggccaatatcttccccgaccagatggtgttcctggatcagatgcgggcg 780
Query: 1789 cacggccaggacggcgggctgctgatgatccccggctcgactgcggatttcactggtaca 1848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 cacggccaggacggcgggctgctgatgatccccggctcgactgcggatttcactggtaca 840
Query: 1849 accctgaattcattgcgccatccactgcccgccgaacaggtcgaggccatctttaccacc 1908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 accctgaattcattgcgccatccactgcccgccgaacaggtcgaggccatctttaccacc 900
Query: 1909 gacaaagccgcatacatcgctgactatgccgaccggatggcgccggtgctcgccgcgcaa 1968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gacaaagccgcatacatcgctgactatgccgaccggatggcgccggtgctcgccgcgcaa 960
Query: 1969 aaggctggctgggccgccgccgccggcgagccactgctgcagccgctgcgcaccctgttc 2028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 aaggctggctgggccgccgccgccggcgagccactgctgcagccgctgcgcaccctgttc 1020
Query: 2029 gagccgatcatgctgcaaagcaacgagatctgcgacggcatcggatacccggtcgagctc 2088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gagccgatcatgctgcaaagcaacgagatctgcgacggcatcggatacccggtcgagctc 1080
Query: 2089 gccatcggtcccgaaaccattgttttggactttccgaaaagagctgtacgagaaccgatt 2148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gccatcggtcccgaaaccattgttttggactttccgaaaagagctgtacgagaaccgatt 1140
Query: 2149 cccgacgagaggttccgctacgggttcgcgatcgcgccggagctggtgcgcacggtgctg 2208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 cccgacgagaggttccgctacgggttcgcgatcgcgccggagctggtgcgcacggtgctg 1200
Query: 2209 cgcgacaacgaacccgactgggtcaacaccatcttcttatccacccgatttcgggcatgg 2268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 cgcgacaacgaacccgactgggtcaacaccatcttcttatccacccgatttcgggcatgg 1260
Query: 2269 cgggttggtggctacaacgaatacctttacacgttcttcaagtgtctgaccgacgaacgc 2328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 cgggttggtggctacaacgaatacctttacacgttcttcaagtgtctgaccgacgaacgc 1320
Query: 2329 atcgcctacgccgacggctggttcgccgaggcccacgatgactcctcatcgatcaccctg 2388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 atcgcctacgccgacggctggttcgccgaggcccacgatgactcctcatcgatcaccctg 1380
Query: 2389 aacggttgggagatccagcgccgctgcccccatctcaaagccgacctatcgaaattcggt 2448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 aacggttgggagatccagcgccgctgcccccatctcaaagccgacctatcgaaattcggt 1440
Query: 2449 gtggtggaaggcaacacgctcacttgtaacctgcacggctggcagtggcgtctggacgac 2508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 gtggtggaaggcaacacgctcacttgtaacctgcacggctggcagtggcgtctggacgac 1500
Query: 2509 ggtcgctgcctcaccgcccggggccatcaactacgcagttcacggccatga 2559
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 ggtcgctgcctcaccgcccggggccatcaactacgcagttcacggccatga 1551
>lcl|NC_000962.2_cdsid_NP_218334.1 [gene=Rv3817]
[protein=phosphotransferase] [protein_id=NP_218334.1]
[location=4281647..4282402]
Length = 756
Score = 1499 bits (756), Expect = 0.0
Identities = 756/756 (100%)
Strand = Plus / Plus
Query: 207 gtgtccttcccctcatcgccacccgcgctgcccgcgatcgttgcccggtttgccgtcggc 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgtccttcccctcatcgccacccgcgctgcccgcgatcgttgcccggtttgccgtcggc 60
Query: 267 aggccggtgcgcgcggtgtgggtcaacgaactgggcggcgtcaccttccgggtggactcc 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggccggtgcgcgcggtgtgggtcaacgaactgggcggcgtcaccttccgggtggactcc 120
Query: 327 ggcatgggcgccggctgcgagttcatcaaggtcgccaggaggggtaccgccgacttcgct 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggcatgggcgccggctgcgagttcatcaaggtcgccaggaggggtaccgccgacttcgct 180
Query: 387 aatgaggcgcggcggctgcgctgggccgcgccgtacctggcggtgccgcgggtactgggt 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aatgaggcgcggcggctgcgctgggccgcgccgtacctggcggtgccgcgggtactgggt 240
Query: 447 gtcggggtcgacggcgattgggcctggttgcacaccgatgcgctgcccggcttgtccgcg 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtcggggtcgacggcgattgggcctggttgcacaccgatgcgctgcccggcttgtccgcg 300
Query: 507 gtgcacccgcgctggcgggcgtccccgcaggtcgcggtcccggcgctgggtgcggggctg 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtgcacccgcgctggcgggcgtccccgcaggtcgcggtcccggcgctgggtgcggggctg 360
Query: 567 cgcaccctgcacgacagcttgccggtgcactcatgtccgttcgactggtcgacggccagc 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgcaccctgcacgacagcttgccggtgcactcatgtccgttcgactggtcgacggccagc 420
Query: 627 cggctggccaagctggccccggcgcgacgcgcggaactgggtgactcaccgccggttgat 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cggctggccaagctggccccggcgcgacgcgcggaactgggtgactcaccgccggttgat 480
Query: 687 cggttggtcgtctgtcacggcgacgcgtgctcacccaacaccatcctcgatgacaccggc 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cggttggtcgtctgtcacggcgacgcgtgctcacccaacaccatcctcgatgacaccggc 540
Query: 747 cgctgttgcggacacgtcgacttcggcaatctcggtgtggccgatcggtgggccgacctc 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cgctgttgcggacacgtcgacttcggcaatctcggtgtggccgatcggtgggccgacctc 600
Query: 807 gcggtcgcgacgctgtcgttgcaatggaactttcccgactacccgggccaggtcagagat 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gcggtcgcgacgctgtcgttgcaatggaactttcccgactacccgggccaggtcagagat 660
Query: 867 gacgagttcttcgccgcctacggtgtggcgccggacccggctcgcatcgactactaccgc 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gacgagttcttcgccgcctacggtgtggcgccggacccggctcgcatcgactactaccgc 720
Query: 927 cggctgtggcaggccgaagacgacagctcacgctaa 962
||||||||||||||||||||||||||||||||||||
Sbjct: 721 cggctgtggcaggccgaagacgacagctcacgctaa 756
>lcl|NC_000962.2_cdsid_NP_218333.1 [gene=Rv3816c]
[protein=acyltransferase] [protein_id=NP_218333.1]
[location=complement(4280792..4281571)]
Length = 780
Score = 260 bits (131), Expect = 5e-69
Identities = 131/131 (100%)
Strand = Plus / Minus
Query: 1 gtgtggttgatcgcgacgacggcgccgccgctggtcggtaggttatccacacccgtgacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 gtgtggttgatcgcgacgacggcgccgccgctggtcggtaggttatccacacccgtgacg 72
Query: 61 gtgatcttcagaccctgtatgcgccaggacaagcgagcaagccgaatgacggtgccgtat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 gtgatcttcagaccctgtatgcgccaggacaagcgagcaagccgaatgacggtgccgtat 12
Query: 121 accggttccac 131
|||||||||||
Sbjct: 11 accggttccac 1
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00206 119093 117687 len=1407
(1407 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_YP_178020.1 [gene=papA2] [protein=polyketi... 2789 0.0
>lcl|NC_000962.2_cdsid_YP_178020.1 [gene=papA2] [protein=polyketide
synthase] [protein_id=YP_178020.1]
[location=complement(4284419..4285825)]
Length = 1407
Score = 2789 bits (1407), Expect = 0.0
Identities = 1407/1407 (100%)
Strand = Plus / Plus
Query: 1 gtgtttagcattacaacgctccgcgactggacgccggacccaggttcgattatctgttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgtttagcattacaacgctccgcgactggacgccggacccaggttcgattatctgttgg 60
Query: 61 cacgcatcaccgacggcgaaggcgaaagcccggcaagcgccgataagtgaggtgccgccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cacgcatcaccgacggcgaaggcgaaagcccggcaagcgccgataagtgaggtgccgccc 120
Query: 121 agctatcaacaagctcaacaccttcgacgttatcgcgatcatgtagcgcgcggtctcgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agctatcaacaagctcaacaccttcgacgttatcgcgatcatgtagcgcgcggtctcgat 180
Query: 181 atgtcgcgcctgatgatcttcacctgggatctacctggccggtgcaacatccgcgccatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgtcgcgcctgatgatcttcacctgggatctacctggccggtgcaacatccgcgccatg 240
Query: 241 aattatgcgatcaacgcacaccttcgccgccacgacacctaccacagttggtttgagttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aattatgcgatcaacgcacaccttcgccgccacgacacctaccacagttggtttgagttc 300
Query: 301 gacaatgccgaacacatcgttcggcataccatcgctgaccctgcagatatcgaagtcgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gacaatgccgaacacatcgttcggcataccatcgctgaccctgcagatatcgaagtcgtc 360
Query: 361 caagctgagcatcagaacatgacgtcggcggagctgcgccaccacattgcaacgccgcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caagctgagcatcagaacatgacgtcggcggagctgcgccaccacattgcaacgccgcag 420
Query: 421 ccgttgcagtgggactgcttcttgttcgggattattcagagtgacgatcacttcaccttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ccgttgcagtgggactgcttcttgttcgggattattcagagtgacgatcacttcaccttc 480
Query: 481 tatgcgagtatcgctcatctctgtgtcgatccgatgattgtgggcgtccttttcatcgag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tatgcgagtatcgctcatctctgtgtcgatccgatgattgtgggcgtccttttcatcgag 540
Query: 541 atccatatgatgtactccgcattggtgggaggcgacccgccgatcgagctcccgccggcg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atccatatgatgtactccgcattggtgggaggcgacccgccgatcgagctcccgccggcg 600
Query: 601 ggccgctacgacgaccactgtgtccgacagtacgccgacacggccgccttgacgttggac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ggccgctacgacgaccactgtgtccgacagtacgccgacacggccgccttgacgttggac 660
Query: 661 tccgcccgggtgcgccgttgggtcgaattcgctgccaacaacgacggaaccctgccgcac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tccgcccgggtgcgccgttgggtcgaattcgctgccaacaacgacggaaccctgccgcac 720
Query: 721 ttcccgttgccgctcggcgatctatcggtgccccataccggaaagctgcttaccgaaacg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ttcccgttgccgctcggcgatctatcggtgccccataccggaaagctgcttaccgaaacg 780
Query: 781 ctgatggacgagcaacagggcgagcgattcgaagccgcctgcgtcgctgcgggcgcccgt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ctgatggacgagcaacagggcgagcgattcgaagccgcctgcgtcgctgcgggcgcccgt 840
Query: 841 tttagcggtggcgttttcgcctgcgccgccctcgctgagcgcgagttgaccaactgtgaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tttagcggtggcgttttcgcctgcgccgccctcgctgagcgcgagttgaccaactgtgaa 900
Query: 901 acgtttgacgtggtaacgacgactgatacacgtaggacgccgacagaactcagaacgacg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 acgtttgacgtggtaacgacgactgatacacgtaggacgccgacagaactcagaacgacg 960
Query: 961 ggctggtttaccgggttggtgccgatcaccgtgccggtcgcctcaggacttttcgatagc 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ggctggtttaccgggttggtgccgatcaccgtgccggtcgcctcaggacttttcgatagc 1020
Query: 1021 gccgcccgtgtcgcgcagatctccttcgattcgggtaaggacctggcgaccgtaccattc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gccgcccgtgtcgcgcagatctccttcgattcgggtaaggacctggcgaccgtaccattc 1080
Query: 1081 gaccgcgtattggagctggcacgccccgaaacggggctgaggccgccccggccgggcaat 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gaccgcgtattggagctggcacgccccgaaacggggctgaggccgccccggccgggcaat 1140
Query: 1141 ttcgtgatgtcctttctggatgccagcattgcgcctctttctacggtcgctaattccgat 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 ttcgtgatgtcctttctggatgccagcattgcgcctctttctacggtcgctaattccgat 1200
Query: 1201 ctgaattttaggatttacgacgaaggtagggtttctcatcaggtctcgatgtgggtcaat 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ctgaattttaggatttacgacgaaggtagggtttctcatcaggtctcgatgtgggtcaat 1260
Query: 1261 cggtatcagcatcagaccacagtgacggtattattcccggacaacccgatcgcaagcgaa 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 cggtatcagcatcagaccacagtgacggtattattcccggacaacccgatcgcaagcgaa 1320
Query: 1321 tccgtcgccaattacatcgcggccatgaaatccatctatatccgcaccgccgacggcacg 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 tccgtcgccaattacatcgcggccatgaaatccatctatatccgcaccgccgacggcacg 1380
Query: 1381 ctcgcgacacttaaaccaggcacatga 1407
|||||||||||||||||||||||||||
Sbjct: 1381 ctcgcgacacttaaaccaggcacatga 1407
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00208 119661 119954 len=294
(294 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218338.1 [gene=Rv3821] [protein=hypothe... 583 e-167
>lcl|NC_000962.2_cdsid_NP_218338.1 [gene=Rv3821]
[protein=hypothetical protein] [protein_id=NP_218338.1]
[location=4285973..4286686]
Length = 714
Score = 583 bits (294), Expect = e-167
Identities = 294/294 (100%)
Strand = Plus / Plus
Query: 1 gtgagtggcctaggagccgcactgccttcggccaactacatgggcgcgatggccgccatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtgagtggcctaggagccgcactgccttcggccaactacatgggcgcgatggccgccatt 480
Query: 61 cttgcctccggcgctacgccggcaacacaggcactggctgtcgttacgttcaacgtggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cttgcctccggcgctacgccggcaacacaggcactggctgtcgttacgttcaacgtggtg 540
Query: 121 gcattcacagtggccgaagtccccctcgtcagctacctggcagcaccgcgtaagacccgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gcattcacagtggccgaagtccccctcgtcagctacctggcagcaccgcgtaagacccgc 600
Query: 181 gcgttcatggctgcgctgcaatcatggctgcggtcccgtagccgccgcgacgccgcgttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gcgttcatggctgcgctgcaatcatggctgcggtcccgtagccgccgcgacgccgcgttg 660
Query: 241 ctggtggccgccggaggttgcctgatgctcacgctaggcctgagcaacctgtag 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ctggtggccgccggaggttgcctgatgctcacgctaggcctgagcaacctgtag 714
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00212 121073 121396 len=324
(324 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218339.1 [gene=Rv3822] [protein=hypothe... 260 6e-70
>lcl|NC_000962.2_cdsid_NP_218339.1 [gene=Rv3822] [protein=hypothetical
protein] [protein_id=NP_218339.1]
[location=4286721..4287935]
Length = 1215
Score = 260 bits (131), Expect = 6e-70
Identities = 131/131 (100%)
Strand = Plus / Plus
Query: 1 gtgccgccaccagcaccgctgccgccacggcagcagcaacaaatgcgctccgcggggcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1085 gtgccgccaccagcaccgctgccgccacggcagcagcaacaaatgcgctccgcggggcca 1144
Query: 61 acgtgggcccgggcgccaacaaggcgttgtcgatggtccggggtttgctacccaaaggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1145 acgtgggcccgggcgccaacaaggcgttgtcgatggtccggggtttgctacccaaaggga 1204
Query: 121 agaagcactag 131
|||||||||||
Sbjct: 1205 agaagcactag 1215
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00214 124797 121528 len=3270
(3270 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218340.1 [gene=mmpL8] [protein=integral... 6482 0.0
lcl|NC_000962.2_cdsid_NP_216038.1 [gene=mmpL12] [protein=transme... 80 1e-14
>lcl|NC_000962.2_cdsid_NP_218340.1 [gene=mmpL8] [protein=integral
membrane transport protein] [protein_id=NP_218340.1]
[location=complement(4288260..4291529)]
Length = 3270
Score = 6482 bits (3270), Expect = 0.0
Identities = 3270/3270 (100%)
Strand = Plus / Plus
Query: 1 atgtgcgacgtcttgatgcagcctgtcagaacaccgagaccctcgacgaacttacgatcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgtgcgacgtcttgatgcagcctgtcagaacaccgagaccctcgacgaacttacgatcg 60
Query: 61 aaaccgcttaggccaaccggtgacgggggtgtctttccgcggctagggcgccttatcgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaccgcttaggccaaccggtgacgggggtgtctttccgcggctagggcgccttatcgtc 120
Query: 121 cgaaggccgtgggtggtgatcgccttctgggtcgcgcttgcgggtctgcttgcgccgacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgaaggccgtgggtggtgatcgccttctgggtcgcgcttgcgggtctgcttgcgccgacg 180
Query: 181 gtgccgtccctggacgcgatctcccagcggcatccagtggcgattctgccatcggacgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtgccgtccctggacgcgatctcccagcggcatccagtggcgattctgccatcggacgcc 240
Query: 241 ccggtgttggtctcgacccggcagatgaccgcggcatttcgtgaagccgggttgcagagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccggtgttggtctcgacccggcagatgaccgcggcatttcgtgaagccgggttgcagagc 300
Query: 301 gttgcggtggtggtgctcagcgatgccaaagggctcggcgcggccgatgaacgcagctac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gttgcggtggtggtgctcagcgatgccaaagggctcggcgcggccgatgaacgcagctac 360
Query: 361 aaagagctggttgacgccctgcgacgcgatactcgagacgtcgtgatgctccaggacttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaagagctggttgacgccctgcgacgcgatactcgagacgtcgtgatgctccaggacttc 420
Query: 421 gtcaccacaccgcccctgcgggagctcatgaccagcaaagacaatcaggcctggatcctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtcaccacaccgcccctgcgggagctcatgaccagcaaagacaatcaggcctggatcctg 480
Query: 481 ccggtcggccttcccggcgacctgggttcgacccagtccaagcaggcgtacgcccgcgtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccggtcggccttcccggcgacctgggttcgacccagtccaagcaggcgtacgcccgcgtc 540
Query: 541 gctgacatcgtcgaacaccaggtcgcaggctcgacactgacggctaacctgaccgggccc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gctgacatcgtcgaacaccaggtcgcaggctcgacactgacggctaacctgaccgggccc 600
Query: 601 gcggccaccgtcgccgatctgaacctcaccgggcaacgggaccgcagtcgcatcgagttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gcggccaccgtcgccgatctgaacctcaccgggcaacgggaccgcagtcgcatcgagttt 660
Query: 661 gcgatcacgatcctgttgttggtcattttgctgatcatctacgggaatccgatcaccatg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gcgatcacgatcctgttgttggtcattttgctgatcatctacgggaatccgatcaccatg 720
Query: 721 gtgttgccattgataacaattggcatgtccgtggtggttgcacagcgcctcgttgcaata 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtgttgccattgataacaattggcatgtccgtggtggttgcacagcgcctcgttgcaata 780
Query: 781 gccggcttggcgggcctcggtattgctaaccagagcattatttttatgagcgggatgatg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gccggcttggcgggcctcggtattgctaaccagagcattatttttatgagcgggatgatg 840
Query: 841 gtcggtgcgggaacggattacgcggtatttctgattagtcgatatcacgactatttacgg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gtcggtgcgggaacggattacgcggtatttctgattagtcgatatcacgactatttacgg 900
Query: 901 cagggcgcggattcggatcaagccgtcaagaaggcattgacatccatcggtaaggtgatc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 cagggcgcggattcggatcaagccgtcaagaaggcattgacatccatcggtaaggtgatc 960
Query: 961 gccgcctccgcggctaccgtagcaatcacctttctcgggatggtgtttacccaactggga 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gccgcctccgcggctaccgtagcaatcacctttctcgggatggtgtttacccaactggga 1020
Query: 1021 attctcaaaacggttggtccgatgttgggaatctcggtagccgtggtcttcttcgcagct 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 attctcaaaacggttggtccgatgttgggaatctcggtagccgtggtcttcttcgcagct 1080
Query: 1081 gtcacactgctacccgccctgatggtgctgaccgggcgtcgcggttggatcgcgccgcgc 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gtcacactgctacccgccctgatggtgctgaccgggcgtcgcggttggatcgcgccgcgc 1140
Query: 1141 cgtgacctcacccggcgcttttggcggagttcgggggtgcacatcgtgcgtcggcccaag 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 cgtgacctcacccggcgcttttggcggagttcgggggtgcacatcgtgcgtcggcccaag 1200
Query: 1201 actcatctgctcgccagcgcgctggtgctggttattctggccggctgcgcaggactggcc 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 actcatctgctcgccagcgcgctggtgctggttattctggccggctgcgcaggactggcc 1260
Query: 1261 cggtacaactacgacgatcgcaagacgcttccggcttccgtcgagagttcgatcgggtat 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 cggtacaactacgacgatcgcaagacgcttccggcttccgtcgagagttcgatcgggtat 1320
Query: 1321 gccgcgttggacaagcatttcccgtctaacctgatcattcccgagtacctgttcatccaa 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 gccgcgttggacaagcatttcccgtctaacctgatcattcccgagtacctgttcatccaa 1380
Query: 1381 tcctcgacggatctgcgcacgccgaaggctctcgccgacctagagcagatggtgcagcgg 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 tcctcgacggatctgcgcacgccgaaggctctcgccgacctagagcagatggtgcagcgg 1440
Query: 1441 gtgagccaagtgccgggtgtcgcgatggtcaggggcattacccgacccgctggacggtcg 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 gtgagccaagtgccgggtgtcgcgatggtcaggggcattacccgacccgctggacggtcg 1500
Query: 1501 ctggagcaggcccggacgtcctggcaggctggcgaagtcggcagcaagctggatgagggt 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 ctggagcaggcccggacgtcctggcaggctggcgaagtcggcagcaagctggatgagggt 1560
Query: 1561 tccaagcagatcgctgtgcacaccggcgacatcgacaaactggccggtggagccaacctg 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 tccaagcagatcgctgtgcacaccggcgacatcgacaaactggccggtggagccaacctg 1620
Query: 1621 atggcgagcaaactcggcgacgtacgggcccaagttaaccgggccatatccacggtcggc 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 atggcgagcaaactcggcgacgtacgggcccaagttaaccgggccatatccacggtcggc 1680
Query: 1681 ggcctcatcgacgcgctggcgtaccttcaggacctgctcgggggcaacagggttctcggc 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 ggcctcatcgacgcgctggcgtaccttcaggacctgctcgggggcaacagggttctcggc 1740
Query: 1741 gaactggaaggcgcggagaagctgatcggcagcatgcgggcactcggtgacaccattgac 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 gaactggaaggcgcggagaagctgatcggcagcatgcgggcactcggtgacaccattgac 1800
Query: 1801 gcggatgcgagctttgtagcgaacaacaccgagtgggcaagcccggtgctgggggcgctg 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 gcggatgcgagctttgtagcgaacaacaccgagtgggcaagcccggtgctgggggcgctg 1860
Query: 1861 gatagcagcccgatgtgcactgccgatccggcttgtgccagtgcgcgcaccgaactgcag 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 gatagcagcccgatgtgcactgccgatccggcttgtgccagtgcgcgcaccgaactgcag 1920
Query: 1921 cgtttggtcacagcgcgcgacgacggaacgctggcaaagatatctgagttggctcgacag 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 cgtttggtcacagcgcgcgacgacggaacgctggcaaagatatctgagttggctcgacag 1980
Query: 1981 ctgcaggccacgcgcgcagtgcagaccctggcagccaccgtgtccggattacgcggggcg 2040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1981 ctgcaggccacgcgcgcagtgcagaccctggcagccaccgtgtccggattacgcggggcg 2040
Query: 2041 ctggccaccgtcatcagggcgatgggttcactggggatgagcagtcctggtggtgtgcga 2100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2041 ctggccaccgtcatcagggcgatgggttcactggggatgagcagtcctggtggtgtgcga 2100
Query: 2101 tccaagatcaacctggtgaacaagggggtcaatgatctcgccgacgggagccggcaactg 2160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2101 tccaagatcaacctggtgaacaagggggtcaatgatctcgccgacgggagccggcaactg 2160
Query: 2161 gctgagggcgtgcagttgttggtcgaccaggtgaagaagatgggtttcgggttgggcgag 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2161 gctgagggcgtgcagttgttggtcgaccaggtgaagaagatgggtttcgggttgggcgag 2220
Query: 2221 gcctcggcgttcctattggcaatgaaggacaccgcgaccacgccggcgatggcggggttc 2280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2221 gcctcggcgttcctattggcaatgaaggacaccgcgaccacgccggcgatggcggggttc 2280
Query: 2281 tatattcccccggagttgttgtcgtatgccaccggtgagagcgtcaaagccgagacgatg 2340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2281 tatattcccccggagttgttgtcgtatgccaccggtgagagcgtcaaagccgagacgatg 2340
Query: 2341 ccgtcagagtatcgggatctgctaggcgggctgaatgtagaccaactcaaaaaagtcgcg 2400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2341 ccgtcagagtatcgggatctgctaggcgggctgaatgtagaccaactcaaaaaagtcgcg 2400
Query: 2401 gcggccttcatttcacccgacggccactcaatacggtatttgatacaaaccgacctgaat 2460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2401 gcggccttcatttcacccgacggccactcaatacggtatttgatacaaaccgacctgaat 2460
Query: 2461 ccattcagcactgctgccatggaccaaattgacgcgatcacggcggccgctcgaggggcg 2520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2461 ccattcagcactgctgccatggaccaaattgacgcgatcacggcggccgctcgaggggcg 2520
Query: 2521 caaccaaataccgcactggccgatgccaaggtgtctgtcgtcggattgcccgtcgttctc 2580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2521 caaccaaataccgcactggccgatgccaaggtgtctgtcgtcggattgcccgtcgttctc 2580
Query: 2581 aaggacacgcgcgactactccgatcacgacctccgattgatcatcgccatgaccgtctgc 2640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2581 aaggacacgcgcgactactccgatcacgacctccgattgatcatcgccatgaccgtctgc 2640
Query: 2641 atcgttctgctcatattgatcgttttgctgcgtgcgattgtggcaccgctgtatctgatc 2700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2641 atcgttctgctcatattgatcgttttgctgcgtgcgattgtggcaccgctgtatctgatc 2700
Query: 2701 ggctcggttatcgtatcgtacctggcggcgctcggtattggcgttatcgtgttccaattt 2760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2701 ggctcggttatcgtatcgtacctggcggcgctcggtattggcgttatcgtgttccaattt 2760
Query: 2761 ttactcggtcaggaaatgcattggagcattccgggattgaccttcgttatattggtcgcg 2820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2761 ttactcggtcaggaaatgcattggagcattccgggattgaccttcgttatattggtcgcg 2820
Query: 2821 gtgggcgcagattacaatatgctgcttatttctaggctgcgtgaagaggccgtcttgggg 2880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2821 gtgggcgcagattacaatatgctgcttatttctaggctgcgtgaagaggccgtcttgggg 2880
Query: 2881 gtgcgttccggtgtcatccggaccgtggcctcaacaggtggtgtgatcactgcggcgggt 2940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2881 gtgcgttccggtgtcatccggaccgtggcctcaacaggtggtgtgatcactgcggcgggt 2940
Query: 2941 ttgatcatggctgcctcgatgtacggtctggtattcgccagcttgggtagcgtggttcaa 3000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2941 ttgatcatggctgcctcgatgtacggtctggtattcgccagcttgggtagcgtggttcaa 3000
Query: 3001 ggtgcgttcgtcctagggaccgggcttttgctggataccttcttggtgcgtaccgttacc 3060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3001 ggtgcgttcgtcctagggaccgggcttttgctggataccttcttggtgcgtaccgttacc 3060
Query: 3061 gtgcccgccattgccgtgttggttgggcaggcgaactggtggttgccgtcaagctggcgg 3120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3061 gtgcccgccattgccgtgttggttgggcaggcgaactggtggttgccgtcaagctggcgg 3120
Query: 3121 ccggcaacctggtggccccttggccgacgccgtggccgtgcccaacgaaccaaacgtaag 3180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3121 ccggcaacctggtggccccttggccgacgccgtggccgtgcccaacgaaccaaacgtaag 3180
Query: 3181 ccgttgttgcccaaggaagaagaagagcaatcaccgcccgacgacgacgatctgatcggt 3240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3181 ccgttgttgcccaaggaagaagaagagcaatcaccgcccgacgacgacgatctgatcggt 3240
Query: 3241 ctttggttacacgacgggctcaggctttag 3270
||||||||||||||||||||||||||||||
Sbjct: 3241 ctttggttacacgacgggctcaggctttag 3270
>lcl|NC_000962.2_cdsid_NP_216038.1 [gene=mmpL12]
[protein=transmembrane transport protein MmpL12]
[protein_id=NP_216038.1]
[location=complement(1714172..1717612)]
Length = 3441
Score = 79.8 bits (40), Expect = 1e-14
Identities = 157/196 (80%)
Strand = Plus / Plus
Query: 823 tttatgagcgggatgatggtcggtgcgggaacggattacgcggtatttctgattagtcga 882
|||||||||| | | ||| |||| |||||||| |||||||| || |||||||| |||||
Sbjct: 769 tttatgagcgcggtcatgatcggggcgggaaccgattacgccgtctttctgataagtcgc 828
Query: 883 tatcacgactatttacggcagggcgcggattcggatcaagccgtcaagaaggcattgaca 942
|||||||||||| | || || |||| | ||||| || ||||||||||| ||||
Sbjct: 829 tatcacgactatgtgcgccacggcgaaaaatcggacatggcggtcaagaaggcgttgatg 888
Query: 943 tccatcggtaaggtgatcgccgcctccgcggctaccgtagcaatcacctttctcgggatg 1002
|||||||| ||||||||| |||| || ||||| ||||| || |||| ||||| | ||||
Sbjct: 889 tccatcggcaaggtgatcaccgcatcggcggccaccgtcgccgtcacatttctggcgatg 948
Query: 1003 gtgtttacccaactgg 1018
||||| ||| ||||||
Sbjct: 949 gtgttcaccaaactgg 964
Score = 52.0 bits (26), Expect = 3e-06
Identities = 86/106 (81%)
Strand = Plus / Plus
Query: 2747 tcgtgttccaatttttactcggtcaggaaatgcattggagcattccgggattgaccttcg 2806
|||| |||||||| |||| || |||||||||||||||||| | |||||| || |||||
Sbjct: 2606 tcgttttccaattgatactgggccaggaaatgcattggagcctgccgggactgtccttca 2665
Query: 2807 ttatattggtcgcggtgggcgcagattacaatatgctgcttatttc 2852
| ||||||| || | ||||| || ||||| |||||||| |||||
Sbjct: 2666 tattattggttgccatcggcgctgactacaacatgctgctcatttc 2711
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00215 126442 124907 len=1536
(1536 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218341.1 [gene=papA1] [protein=polyketi... 3045 0.0
>lcl|NC_000962.2_cdsid_NP_218341.1 [gene=papA1] [protein=polyketide
synthase] [protein_id=NP_218341.1]
[location=complement(4291639..4293174)]
Length = 1536
Score = 3045 bits (1536), Expect = 0.0
Identities = 1536/1536 (100%)
Strand = Plus / Plus
Query: 1 gtgcgaataggaccagtagagttgtcagcggtcaaagactgggacccagcgcccggcgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgcgaataggaccagtagagttgtcagcggtcaaagactgggacccagcgcccggcgtg 60
Query: 61 ttagtttcgtggcacccaacacctgcctcgtgcgcgaaagcccttgcagcgccggtgagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttagtttcgtggcacccaacacctgcctcgtgcgcgaaagcccttgcagcgccggtgagt 120
Query: 121 gctgtgcctcccagttatgtacaagccagacaaattcggagcttttctgagcaggctgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctgtgcctcccagttatgtacaagccagacaaattcggagcttttctgagcaggctgcc 180
Query: 181 cgggggctcgatcactcgcggctgctcattgcgtccgttgaggtgtttggtcactgcgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgggggctcgatcactcgcggctgctcattgcgtccgttgaggtgtttggtcactgcgat 240
Query: 241 ctgcgcgccatgacctatgtcatcaatgcgcaccttcgtcggcacgatacataccgcagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctgcgcgccatgacctatgtcatcaatgcgcaccttcgtcggcacgatacataccgcagc 300
Query: 301 tggttcgagcttcgagataccgaccacatcgttcggcacagcatcgccgatccggcggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tggttcgagcttcgagataccgaccacatcgttcggcacagcatcgccgatccggcggat 360
Query: 361 atcgaatttgttccgaccacacatggcgagatgacgagcgcggacctgcgacagcacatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atcgaatttgttccgaccacacatggcgagatgacgagcgcggacctgcgacagcacatc 420
Query: 421 gtggcgacaccggattcgcttcattgggactgcttcagcttcggagtcattcagcgagca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtggcgacaccggattcgcttcattgggactgcttcagcttcggagtcattcagcgagca 480
Query: 481 gactccttcacgttctatgccagcatcgatcatctgcatgcggacggtcagttcgtagga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gactccttcacgttctatgccagcatcgatcatctgcatgcggacggtcagttcgtagga 540
Query: 541 gtcggactcatggagttccagtcgatgtacaccgcgctgataatgggtgagccaccgatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtcggactcatggagttccagtcgatgtacaccgcgctgataatgggtgagccaccgatt 600
Query: 601 gggttatcggaggctggcagctatgtggacttctgcgtcaggcagcacgagtacacctcg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gggttatcggaggctggcagctatgtggacttctgcgtcaggcagcacgagtacacctcg 660
Query: 661 gcgttgaccgtcgattccccggaggtgcgcgcgtggatcgacttcgccgaaatcaataac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gcgttgaccgtcgattccccggaggtgcgcgcgtggatcgacttcgccgaaatcaataac 720
Query: 721 ggaactttcccggaatttccgctgcccctcggagatccgtctgtacgctgcggcggcgac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ggaactttcccggaatttccgctgcccctcggagatccgtctgtacgctgcggcggcgac 780
Query: 781 ctgctcagcatgatgctaatggacgagcagcaaacacagcgattcgaatccgcctgcatg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ctgctcagcatgatgctaatggacgagcagcaaacacagcgattcgaatccgcctgcatg 840
Query: 841 gcggcgaacgctcgtttcattggtggcatgctggcttgcatcgccatcgcgatacacgag 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gcggcgaacgctcgtttcattggtggcatgctggcttgcatcgccatcgcgatacacgag 900
Query: 901 ttgaccggcgccgatacctattttggaattactcccaaagatatccgcacaccagccgac 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ttgaccggcgccgatacctattttggaattactcccaaagatatccgcacaccagccgac 960
Query: 961 cttatgacgcaggggtggttcaccgggcagatcccggtgaccgttccagtcgccggattg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 cttatgacgcaggggtggttcaccgggcagatcccggtgaccgttccagtcgccggattg 1020
Query: 1021 tcctttaacgagattgcacgaatcgcgcagacctccttcgatactggtgcggatctggcg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 tcctttaacgagattgcacgaatcgcgcagacctccttcgatactggtgcggatctggcg 1080
Query: 1081 aaagtgccgttcgaacgggtcgtcgaattgtcgccgtcgctgcgcaggccccaaccgctt 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 aaagtgccgttcgaacgggtcgtcgaattgtcgccgtcgctgcgcaggccccaaccgctt 1140
Query: 1141 ttttccctggtgaactttttcgacgcacaagtgggaccgctctcggcggtgacgaaactg 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 ttttccctggtgaactttttcgacgcacaagtgggaccgctctcggcggtgacgaaactg 1200
Query: 1201 ttcgagggcctcaacgttggtacctacagcgacgggagggtcacctatccgctaagtacg 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ttcgagggcctcaacgttggtacctacagcgacgggagggtcacctatccgctaagtacg 1260
Query: 1261 atggtcggtcgtttcgacgagaccgcggcgagcgtgctattcccagataatccggtcgct 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 atggtcggtcgtttcgacgagaccgcggcgagcgtgctattcccagataatccggtcgct 1320
Query: 1321 cgcgaatccgttaccgcatatctgagggcaattagatcggtgtgtatgcgcattgccaac 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 cgcgaatccgttaccgcatatctgagggcaattagatcggtgtgtatgcgcattgccaac 1380
Query: 1381 ggtgggacggcggaacgtgtaggcaacgtcgttgcgctttccccaggccggcgaaataac 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 ggtgggacggcggaacgtgtaggcaacgtcgttgcgctttccccaggccggcgaaataac 1440
Query: 1441 atcgaaaggatgacatggcggtcttgtcgcgcgggtgattttatcgatatctgcaatcta 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 atcgaaaggatgacatggcggtcttgtcgcgcgggtgattttatcgatatctgcaatcta 1500
Query: 1501 aaggttgcgaatgtgacggtagatagagaagcttag 1536
||||||||||||||||||||||||||||||||||||
Sbjct: 1501 aaggttgcgaatgtgacggtagatagagaagcttag 1536
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00223 132873 126493 len=6381
(6381 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218342.1 [gene=pks2] [protein=polyketid... 1.265e+04 0.0
lcl|NC_000962.2_cdsid_NP_216043.1 [gene=pks5] [protein=polyketid... 230 1e-59
lcl|NC_000962.2_cdsid_NP_217456.1 [gene=mas] [protein=multifunct... 127 1e-28
lcl|NC_000962.2_cdsid_NP_215697.1 [gene=pks4] [protein=polyketid... 100 3e-20
lcl|NC_000962.2_cdsid_NP_215696.1 [gene=pks3] [protein=polyketid... 64 1e-09
>lcl|NC_000962.2_cdsid_NP_218342.1 [gene=pks2] [protein=polyketide
synthase] [protein_id=NP_218342.1]
[location=complement(4293225..4299605)]
Length = 6381
Score = 1.265e+04 bits (6381), Expect = 0.0
Identities = 6381/6381 (100%)
Strand = Plus / Plus
Query: 1 ttgggcttggggtcggcggcgtcaggcactggtgcagataggggtgcatggacgttggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgggcttggggtcggcggcgtcaggcactggtgcagataggggtgcatggacgttggct 60
Query: 61 gaaccacgtgtgactccggttgctgttatcggcatggcttgccggctgcccggcgggatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaaccacgtgtgactccggttgctgttatcggcatggcttgccggctgcccggcgggatc 120
Query: 121 gattcccccgagttgttgtggaaggcgttgttacgaggcgacgacctgatcaccgaggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gattcccccgagttgttgtggaaggcgttgttacgaggcgacgacctgatcaccgaggtg 180
Query: 181 ccgccggaccggtgggattgcgacgagttctacgacccgcagccgggcgtgcccggtcgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccgccggaccggtgggattgcgacgagttctacgacccgcagccgggcgtgcccggtcgg 240
Query: 241 acggtgtgcaagtggggcggtttcctggataaccccgcggatttcgattgcgagttcttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acggtgtgcaagtggggcggtttcctggataaccccgcggatttcgattgcgagttcttt 300
Query: 301 ggcatcggcgagcgggaggcgattgcgatcgatccgcagcaacgtctgttgctggagacg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggcatcggcgagcgggaggcgattgcgatcgatccgcagcaacgtctgttgctggagacg 360
Query: 361 tcctgggaggccatggagcacgccggtcttactcagcaaacgctggcaggctcggcgacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcctgggaggccatggagcacgccggtcttactcagcaaacgctggcaggctcggcgacc 420
Query: 421 ggcgtgttcgcgggtgtcacccatggtgactacacgatggtggcggccgacgccaaacaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggcgtgttcgcgggtgtcacccatggtgactacacgatggtggcggccgacgccaaacaa 480
Query: 481 ttggaggagccgtacggatatctgggcaacagcttcagcatggcgtcgggccgggtcgcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttggaggagccgtacggatatctgggcaacagcttcagcatggcgtcgggccgggtcgcc 540
Query: 541 tacgcgatgcgactgcacggtccggcaataaccgttgataccgcatgctcgtccggcctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tacgcgatgcgactgcacggtccggcaataaccgttgataccgcatgctcgtccggcctg 600
Query: 601 acggccgtgcacatggcgtgtcgcagcctgcacgagggtgaaagcgacgttgccttggcg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 acggccgtgcacatggcgtgtcgcagcctgcacgagggtgaaagcgacgttgccttggcg 660
Query: 661 gggggtgtcgccttgatgctggagccacgcaaggccgctgctggatccgctttgggcatg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gggggtgtcgccttgatgctggagccacgcaaggccgctgctggatccgctttgggcatg 720
Query: 721 ttgtccccgaccggacgttgtcgcgcgttcgatgtcgcggctgacgggttcgtgtcaggc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ttgtccccgaccggacgttgtcgcgcgttcgatgtcgcggctgacgggttcgtgtcaggc 780
Query: 781 gagggttgtgccgtggtggtgctcaagcggttgccggatgcattggccgacggtgaccgg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gagggttgtgccgtggtggtgctcaagcggttgccggatgcattggccgacggtgaccgg 840
Query: 841 atcctggcggtaattcgtggcacgtccgcaaatcaggatggccacacggtcaatatcgcg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 atcctggcggtaattcgtggcacgtccgcaaatcaggatggccacacggtcaatatcgcg 900
Query: 901 acgccttcgcagcccgcacaggttgcggcttatcgagcggcgttggctgccggtggcgtg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 acgccttcgcagcccgcacaggttgcggcttatcgagcggcgttggctgccggtggcgtg 960
Query: 961 gacgccgcgacggtcggcatggtcgaagcgcacggccccggcaccccgatcggtgacccc 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gacgccgcgacggtcggcatggtcgaagcgcacggccccggcaccccgatcggtgacccc 1020
Query: 1021 attgaatatgcaagtgtctccgaggtgtatggggtcgacggcccgtgcgcactcgcatcg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 attgaatatgcaagtgtctccgaggtgtatggggtcgacggcccgtgcgcactcgcatcg 1080
Query: 1081 gtgaagaccaacttcggacacacccagtcgaccgccggggtgctagggctaatcaaggtg 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gtgaagaccaacttcggacacacccagtcgaccgccggggtgctagggctaatcaaggtg 1140
Query: 1141 gttctcgctctgaaacatggtgtggttccacgtaatctgcacttcactcggctgcccgat 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gttctcgctctgaaacatggtgtggttccacgtaatctgcacttcactcggctgcccgat 1200
Query: 1201 gagattgctggcatcaccaccaacctcttcgtgcccgaggtgaccacaccgtggcccacc 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 gagattgctggcatcaccaccaacctcttcgtgcccgaggtgaccacaccgtggcccacc 1260
Query: 1261 aacggtcgtcaggtgccccggcgggcggcagtgtcgtcttatgggttctcgggaacgaac 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 aacggtcgtcaggtgccccggcgggcggcagtgtcgtcttatgggttctcgggaacgaac 1320
Query: 1321 gtgcacgctgttgtggagcaagctccgcaaaccgaagcccagccccacgcggcgagcacc 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 gtgcacgctgttgtggagcaagctccgcaaaccgaagcccagccccacgcggcgagcacc 1380
Query: 1381 cccccgaccggcacccctgccttgttcacgctgtccgcttcctcggccgacgcgctgcgg 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 cccccgaccggcacccctgccttgttcacgctgtccgcttcctcggccgacgcgctgcgg 1440
Query: 1441 cagactgctcagcggttgaccgactggatacagcagcacgccgactccctggtgctctcg 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 cagactgctcagcggttgaccgactggatacagcagcacgccgactccctggtgctctcg 1500
Query: 1501 gatcttgcgtacacgctggcgcggcggcgtacgcaccggtcggtgcgcacggcggtcatc 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 gatcttgcgtacacgctggcgcggcggcgtacgcaccggtcggtgcgcacggcggtcatc 1560
Query: 1561 gcgagcagcgtcgacgagctgattgccggcttgggcgaggtcgccgacggtgacaccgtt 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 gcgagcagcgtcgacgagctgattgccggcttgggcgaggtcgccgacggtgacaccgtt 1620
Query: 1621 taccagcccgcggtggggcaggatgaccgcgggccggtctggttattctccgggcaaggg 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 taccagcccgcggtggggcaggatgaccgcgggccggtctggttattctccgggcaaggg 1680
Query: 1681 tcgcagtgggcagcgatgggcgccgatctgctgacgaacgaatcggtgttcgccgcgacc 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 tcgcagtgggcagcgatgggcgccgatctgctgacgaacgaatcggtgttcgccgcgacc 1740
Query: 1741 gttgcggagctagagccattgatcgccgcggagtccgggttctcggtcaccgaggcgatg 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 gttgcggagctagagccattgatcgccgcggagtccgggttctcggtcaccgaggcgatg 1800
Query: 1801 acggcgcccgagaccgtgactggcatcgacagagttcagccgaccatcttcgcgatgcag 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 acggcgcccgagaccgtgactggcatcgacagagttcagccgaccatcttcgcgatgcag 1860
Query: 1861 gtcgcgttggcagccacgatggcggcatacggagtgcgcccgggcgccgtgatcggccac 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 gtcgcgttggcagccacgatggcggcatacggagtgcgcccgggcgccgtgatcggccac 1920
Query: 1921 tcaatgggtgagtcggccgcggctgtggtcgcaggagtgctgtcagccgaagatggggta 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 tcaatgggtgagtcggccgcggctgtggtcgcaggagtgctgtcagccgaagatggggta 1980
Query: 1981 cgcgtcatctgccgacgatcaaaactgatggcgacgatcgccggttccgcggcgatggcg 2040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1981 cgcgtcatctgccgacgatcaaaactgatggcgacgatcgccggttccgcggcgatggcg 2040
Query: 2041 tcggtggagttgcctgccttagctgtgcagtcggaattgaccgctctaggcatcgacgat 2100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2041 tcggtggagttgcctgccttagctgtgcagtcggaattgaccgctctaggcatcgacgat 2100
Query: 2101 gtggtggtcgccgtggtgaccgcgccgcagtccaccgtgatcgccggaggcaccgagtcg 2160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2101 gtggtggtcgccgtggtgaccgcgccgcagtccaccgtgatcgccggaggcaccgagtcg 2160
Query: 2161 gtgcgcaagctggtcgacatatgggagcggcgagacgtgctggcgcgggcggtggccgtc 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2161 gtgcgcaagctggtcgacatatgggagcggcgagacgtgctggcgcgggcggtggccgtc 2220
Query: 2221 gacgtggcttcgcattcgccgcaggtggatccgatcctcgacgagttgatagctgcgctg 2280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2221 gacgtggcttcgcattcgccgcaggtggatccgatcctcgacgagttgatagctgcgctg 2280
Query: 2281 gccgacctgaatccgaaagctcctgagattccctactattcggcgacgcttttcgacccg 2340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2281 gccgacctgaatccgaaagctcctgagattccctactattcggcgacgcttttcgacccg 2340
Query: 2341 cgcgaagcgccggcgtgcgacgcgcgttactgggccgacaatttgcgccacaccgtgcgg 2400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2341 cgcgaagcgccggcgtgcgacgcgcgttactgggccgacaatttgcgccacaccgtgcgg 2400
Query: 2401 ttctccgctgcggtgcgctcggcgctcgacgacgggtaccgagtcttcgccgagctttcg 2460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2401 ttctccgctgcggtgcgctcggcgctcgacgacgggtaccgagtcttcgccgagctttcg 2460
Query: 2461 ccgcacccgctgctgacccacgcggtcgatcagattgccggcagtgtaggcatgccggtt 2520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2461 ccgcacccgctgctgacccacgcggtcgatcagattgccggcagtgtaggcatgccggtt 2520
Query: 2521 gccgcgctggccggtatgcggcgggagcagccattgccgctggggctccgtcgcctgctg 2580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2521 gccgcgctggccggtatgcggcgggagcagccattgccgctggggctccgtcgcctgctg 2580
Query: 2581 acggatctgcacaacgctggtgcggcagtggacttctcggtgctctgtccccaaggccgc 2640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2581 acggatctgcacaacgctggtgcggcagtggacttctcggtgctctgtccccaaggccgc 2640
Query: 2641 ttggtcgatgctccgctgccggcgtggtcgcaccggttcctgttctatgaccgcgaaggc 2700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2641 ttggtcgatgctccgctgccggcgtggtcgcaccggttcctgttctatgaccgcgaaggc 2700
Query: 2701 gttgacaatcggtcgccgggtggctccacggtagccgtgcacccgttgttgggcgcacac 2760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2701 gttgacaatcggtcgccgggtggctccacggtagccgtgcacccgttgttgggcgcacac 2760
Query: 2761 gtgcgattgcccgaagagccggaacgccacgcctggcaggccgatgttggtaccgcaacc 2820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2761 gtgcgattgcccgaagagccggaacgccacgcctggcaggccgatgttggtaccgcaacc 2820
Query: 2821 ttgccctggttgggcgatcaccggatacacaacgtggctgctcttccaggggccgcctac 2880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2821 ttgccctggttgggcgatcaccggatacacaacgtggctgctcttccaggggccgcctac 2880
Query: 2881 tgcgagatggcgttgtctgcggcccgtgccgtcctcggcgagcagtccgaagtacgcgac 2940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2881 tgcgagatggcgttgtctgcggcccgtgccgtcctcggcgagcagtccgaagtacgcgac 2940
Query: 2941 atgcgctttgaggcgatgctgctgctggatgaccagaccccggtgtccaccgtggcaacg 3000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2941 atgcgctttgaggcgatgctgctgctggatgaccagaccccggtgtccaccgtggcaacg 3000
Query: 3001 gtgacctcgcccggtgtcgtcgacttcgccgtcgaggccttgcaggaaggcgttgggcat 3060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3001 gtgacctcgcccggtgtcgtcgacttcgccgtcgaggccttgcaggaaggcgttgggcat 3060
Query: 3061 cacttgcggcgtgcgtcggcggtgctgcagcaggtatccggcgaatgcgagccgccggcg 3120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3061 cacttgcggcgtgcgtcggcggtgctgcagcaggtatccggcgaatgcgagccgccggcg 3120
Query: 3121 tacgacatggcctccttattggaagcccacccttgccgcgtggacggtgaggatctgcgc 3180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3121 tacgacatggcctccttattggaagcccacccttgccgcgtggacggtgaggatctgcgc 3180
Query: 3181 cggcaattcgacaagcacggtgtgcaatatggtccggccttcaccggcctggccgtggcc 3240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3181 cggcaattcgacaagcacggtgtgcaatatggtccggccttcaccggcctggccgtggcc 3240
Query: 3241 tatgtcgcggaggatgcgaccgccacaatgctggccgaagtcgcgctgcccggctcgatt 3300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3241 tatgtcgcggaggatgcgaccgccacaatgctggccgaagtcgcgctgcccggctcgatt 3300
Query: 3301 cgttcgcagcagggcctgtacgcaatccacccggccctcctggatgcctgtttccagtcg 3360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3301 cgttcgcagcagggcctgtacgcaatccacccggccctcctggatgcctgtttccagtcg 3360
Query: 3361 gtcggcgcgcatcccgatagccagtcggtaggtagcggcctattggtgccgttgggggtg 3420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3361 gtcggcgcgcatcccgatagccagtcggtaggtagcggcctattggtgccgttgggggtg 3420
Query: 3421 cgccgagtccgtgcctatgctccggtgcgtaccgctcgctattgctacacgcgggtgacc 3480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3421 cgccgagtccgtgcctatgctccggtgcgtaccgctcgctattgctacacgcgggtgacc 3480
Query: 3481 aaagtcgagttggtcggcgtcgaggccgatatcgacgtgctggacgcgcacggcacggtg 3540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3481 aaagtcgagttggtcggcgtcgaggccgatatcgacgtgctggacgcgcacggcacggtg 3540
Query: 3541 ttgctggccgtgtgcggactgcgaatcggtacgggagtgtccgagcgcgacaaacacaat 3600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3541 ttgctggccgtgtgcggactgcgaatcggtacgggagtgtccgagcgcgacaaacacaat 3600
Query: 3601 cgggtgctgaatgagcgcttactcaccatcgaatggcaccagcgtgagctgcccgagatg 3660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3601 cgggtgctgaatgagcgcttactcaccatcgaatggcaccagcgtgagctgcccgagatg 3660
Query: 3661 gacccctctggcgctggaaaatggctgctgatcagtgactgcgctgcctctgatgtgacc 3720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3661 gacccctctggcgctggaaaatggctgctgatcagtgactgcgctgcctctgatgtgacc 3720
Query: 3721 gctacccggctagcggacgcgtttagggaacacagcgcggcgtgcacgacgatgcggtgg 3780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3721 gctacccggctagcggacgcgtttagggaacacagcgcggcgtgcacgacgatgcggtgg 3780
Query: 3781 ccactgcacgacgaccagttggccgccgccgaccagctacgcgatcaagttggtagcgac 3840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3781 ccactgcacgacgaccagttggccgccgccgaccagctacgcgatcaagttggtagcgac 3840
Query: 3841 gagtttagcggcgtggtcgtgctcaccgggtcgaacaccggtacgccgcatcaggggagc 3900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3841 gagtttagcggcgtggtcgtgctcaccgggtcgaacaccggtacgccgcatcaggggagc 3900
Query: 3901 gcggatcgcggcgctgagtacgttcgccggctggtgggtatcgctcgcgaattgtcagac 3960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3901 gcggatcgcggcgctgagtacgttcgccggctggtgggtatcgctcgcgaattgtcagac 3960
Query: 3961 cttcccggggcggtgccgcgcatgtacgtcgtgacgcggggtgcccagcgggtgctggcc 4020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3961 cttcccggggcggtgccgcgcatgtacgtcgtgacgcggggtgcccagcgggtgctggcc 4020
Query: 4021 gacgactgcgtcaatcttgagcagggcgggctgcgtggtctactgcggacgatcggcgcc 4080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4021 gacgactgcgtcaatcttgagcagggcgggctgcgtggtctactgcggacgatcggcgcc 4080
Query: 4081 gagcaccctcacctgcgtgccacccagatcgacgtggacgaacagaccggtgtcgagcag 4140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4081 gagcaccctcacctgcgtgccacccagatcgacgtggacgaacagaccggtgtcgagcag 4140
Query: 4141 ctggcacgccaattgctggccacgtcggaagaagacgagaccgcctggcgagacaacgag 4200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4141 ctggcacgccaattgctggccacgtcggaagaagacgagaccgcctggcgagacaacgag 4200
Query: 4201 tggtacgtggcgcgcttgtgtccgaccccgttgcgtcctcaggagcggcgcaccatcgtc 4260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4201 tggtacgtggcgcgcttgtgtccgaccccgttgcgtcctcaggagcggcgcaccatcgtc 4260
Query: 4261 gcggatcatcagcagagcggcatgcgcctgcagatccgtacccccggcgatatgcaaacg 4320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4261 gcggatcatcagcagagcggcatgcgcctgcagatccgtacccccggcgatatgcaaacg 4320
Query: 4321 atagagctggccgcgtttcaccgcgttccaccaggaccaggacagatcgaggttgcggtc 4380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4321 atagagctggccgcgtttcaccgcgttccaccaggaccaggacagatcgaggttgcggtc 4380
Query: 4381 cgtgcgtccagcgtcaactttgccgatgtactcatcgctttcggtcgctaccccagcttc 4440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4381 cgtgcgtccagcgtcaactttgccgatgtactcatcgctttcggtcgctaccccagcttc 4440
Query: 4441 gagggacacctgccccagctgggcacggatttcgccggcgtggtgaccgcggtcggacca 4500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4441 gagggacacctgccccagctgggcacggatttcgccggcgtggtgaccgcggtcggacca 4500
Query: 4501 ggcgtcactgaccacaaggttggtgaccatgttggtggcatgtcgcctaacggctgctgg 4560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4501 ggcgtcactgaccacaaggttggtgaccatgttggtggcatgtcgcctaacggctgctgg 4560
Query: 4561 ggcacattcgtcacgtgtgacgctcggctggccgcgacgctgccaccgggcctgggtgac 4620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4561 ggcacattcgtcacgtgtgacgctcggctggccgcgacgctgccaccgggcctgggtgac 4620
Query: 4621 gcacaggccgctgcggtgaccaccgcgcacgccaccgcctggtacggactgcatgagctc 4680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4621 gcacaggccgctgcggtgaccaccgcgcacgccaccgcctggtacggactgcatgagctc 4680
Query: 4681 gcccggattagggcgggtgacacggtgctaattcactccggcaccggcggggtcggacaa 4740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4681 gcccggattagggcgggtgacacggtgctaattcactccggcaccggcggggtcggacaa 4740
Query: 4741 gcggcgatcgctatagcccgcgcggcgggcgctgagatcttcgccaccgccggtacccca 4800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4741 gcggcgatcgctatagcccgcgcggcgggcgctgagatcttcgccaccgccggtacccca 4800
Query: 4801 cagcgtcgagagctattgcgcaacatgggtattgagcatgtctatgactcgcgcagcatc 4860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4801 cagcgtcgagagctattgcgcaacatgggtattgagcatgtctatgactcgcgcagcatc 4860
Query: 4861 gagttcgccgagcagattcggcgggacactaacggccggggtgtcgatgtcgtgctcaac 4920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4861 gagttcgccgagcagattcggcgggacactaacggccggggtgtcgatgtcgtgctcaac 4920
Query: 4921 tcggtgaccggcgccgcgcaacttgccgggctgaaactgctcgccttccggggacggttc 4980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4921 tcggtgaccggcgccgcgcaacttgccgggctgaaactgctcgccttccggggacggttc 4980
Query: 4981 gtcgagattggcaagcgcgacatctatggtgacaccaagctggggctctttcccttccgg 5040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4981 gtcgagattggcaagcgcgacatctatggtgacaccaagctggggctctttcccttccgg 5040
Query: 5041 cgcaacctgtccttctacgccgtagacctggggttgctgtctgcgacacacccagaagag 5100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5041 cgcaacctgtccttctacgccgtagacctggggttgctgtctgcgacacacccagaagag 5100
Query: 5101 ctgcgcgacctgctcggcacggtctatcgcttgaccgcagccggcgagttgccgatgccg 5160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5101 ctgcgcgacctgctcggcacggtctatcgcttgaccgcagccggcgagttgccgatgccg 5160
Query: 5161 cagagcacccattaccccctcgtcgaggcggccaccgccatccgtgtgatgggcaacgcc 5220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5161 cagagcacccattaccccctcgtcgaggcggccaccgccatccgtgtgatgggcaacgcc 5220
Query: 5221 gagcacaccggcaaactcgtcctccacatcccacagaccggaaaaagcctcgttaccctg 5280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5221 gagcacaccggcaaactcgtcctccacatcccacagaccggaaaaagcctcgttaccctg 5280
Query: 5281 cctccggaacaagctcaggtgttccgtcccgacggctcctacatcatcaccggcggcctc 5340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5281 cctccggaacaagctcaggtgttccgtcccgacggctcctacatcatcaccggcggcctc 5340
Query: 5341 ggtgggctagggctgttcctggccgagaagatggccgcggccggttgcggccggatcgtg 5400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5341 ggtgggctagggctgttcctggccgagaagatggccgcggccggttgcggccggatcgtg 5400
Query: 5401 ctgaattcccgcacccagccgacgcaaaagatgagggaaacgatcgaggccatcgcggcg 5460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5401 ctgaattcccgcacccagccgacgcaaaagatgagggaaacgatcgaggccatcgcggcg 5460
Query: 5461 atgggctctgaagtcgtggtggaatgcggtgacatcgcccaaccgggtaccgcggagcgg 5520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5461 atgggctctgaagtcgtggtggaatgcggtgacatcgcccaaccgggtaccgcggagcgg 5520
Query: 5521 ttggtggcgaccgctgtggccaccgggcttccggtacgaggcgtgctacacgcggccgcg 5580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5521 ttggtggcgaccgctgtggccaccgggcttccggtacgaggcgtgctacacgcggccgcg 5580
Query: 5581 gtggtcgaggacgccaccttggccaatatcaccgacgagttgctggcgcgcgactgggcg 5640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5581 gtggtcgaggacgccaccttggccaatatcaccgacgagttgctggcgcgcgactgggcg 5640
Query: 5641 ccaaaggttcacggtgcctgggagttgcatgaagcaaccagcggacagccgcttgactgg 5700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5641 ccaaaggttcacggtgcctgggagttgcatgaagcaaccagcggacagccgcttgactgg 5700
Query: 5701 ttctgcttgttttcgtcggcggcagctctcaccggctcgccgggacagagtgcctactca 5760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5701 ttctgcttgttttcgtcggcggcagctctcaccggctcgccgggacagagtgcctactca 5760
Query: 5761 gcggccaacagctggctggacgccttcgcgcattggcggcaagctcagggcctgccggct 5820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5761 gcggccaacagctggctggacgccttcgcgcattggcggcaagctcagggcctgccggct 5820
Query: 5821 accgcgatcgcgtggggagcctggtcggatatcggccagttggggtggtggtcggcatcg 5880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5821 accgcgatcgcgtggggagcctggtcggatatcggccagttggggtggtggtcggcatcg 5880
Query: 5881 cccgcgcgggcttcggcattggaggaaagcaactacacggcgatcactcccgacgaaggt 5940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5881 cccgcgcgggcttcggcattggaggaaagcaactacacggcgatcactcccgacgaaggt 5940
Query: 5941 gcttacgcgttcgaggcgctattgcgccacaaccgcgtctataccggctatgccccggtc 6000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5941 gcttacgcgttcgaggcgctattgcgccacaaccgcgtctataccggctatgccccggtc 6000
Query: 6001 atcggagccccgtggctggtcgccttcgcagagcgcagccggtttttcgaagtgttctcc 6060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6001 atcggagccccgtggctggtcgccttcgcagagcgcagccggtttttcgaagtgttctcc 6060
Query: 6061 agcagcaacggttcgggcacaagcaaattccgcgtcgagctgaacgagctgccacgcgac 6120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6061 agcagcaacggttcgggcacaagcaaattccgcgtcgagctgaacgagctgccacgcgac 6120
Query: 6121 gagtggccggcgcggcttcggcagctggtcgccgagcaggtcagcctgattctgcggcgc 6180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6121 gagtggccggcgcggcttcggcagctggtcgccgagcaggtcagcctgattctgcggcgc 6180
Query: 6181 accgtcgaccctgaccgcccgctacccgagtatggacttgattcgttgggcgcactagag 6240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6181 accgtcgaccctgaccgcccgctacccgagtatggacttgattcgttgggcgcactagag 6240
Query: 6241 ctgcgcactcggatcgagaccgagaccggaatccggttggcacccaagaacgtcagcgcc 6300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6241 ctgcgcactcggatcgagaccgagaccggaatccggttggcacccaagaacgtcagcgcc 6300
Query: 6301 acggtgcggggcttagcggatcacttgtatgaacagctggcgcccgacgacgctcctgct 6360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6301 acggtgcggggcttagcggatcacttgtatgaacagctggcgcccgacgacgctcctgct 6360
Query: 6361 gccgcgctgtcgtcacagtaa 6381
|||||||||||||||||||||
Sbjct: 6361 gccgcgctgtcgtcacagtaa 6381
>lcl|NC_000962.2_cdsid_NP_216043.1 [gene=pks5] [protein=polyketide
synthase] [protein_id=NP_216043.1]
[location=complement(1722083..1728409)]
Length = 6327
Score = 230 bits (116), Expect = 1e-59
Identities = 332/404 (82%)
Strand = Plus / Plus
Query: 712 ttgggcatgttgtccccgaccggacgttgtcgcgcgttcgatgtcgcggctgacgggttc 771
|||||||||||||| ||||||| || |||| |||||||| || | || ||||| |||
Sbjct: 679 ttgggcatgttgtctgcgaccgggcgctgtcatgcgttcgacgtttccgcggacggtttc 738
Query: 772 gtgtcaggcgagggttgtgccgtggtggtgctcaagcggttgccggatgcattggccgac 831
|| || || |||||||||| | || ||| ||||||||||||||||||||| |||||||
Sbjct: 739 gtctccggtgagggttgtgtcatgttggcgctcaagcggttgccggatgcgctggccgat 798
Query: 832 ggtgaccggatcctggcggtaattcgtggcacgtccgcaaatcaggatggccacacggtc 891
|| |||||||||||||| ||||||||||||||| |||| || || || |||||||| |||
Sbjct: 799 ggggaccggatcctggccgtaattcgtggcacggccgccaaccaagacggccacaccgtc 858
Query: 892 aatatcgcgacgccttcgcagcccgcacaggttgcggcttatcgagcggcgttggctgcc 951
||||||||||| || || | | |||| ||||| ||||| ||||| | |||||||| ||
Sbjct: 859 aatatcgcgacaccatcacggtccgcgcaggtcgcggcgtatcgggaggcgttggatgtg 918
Query: 952 ggtggcgtggacgccgcgacggtcggcatggtcgaagcgcacggccccggcaccccgatc 1011
| || |||||| | || ||||| ||||||||||| ||||||||||| ||||||||| |
Sbjct: 919 gccggtgtggacccggctacggtgggcatggtcgaggcgcacggcccgggcaccccggtg 978
Query: 1012 ggtgaccccattgaatatgcaagtgtctccgaggtgtatggggtcgacggcccgtgcgca 1071
||||||||||| ||||| || || | ||||||| || || ||||||||| |||||
Sbjct: 979 ggtgaccccatcgaatacgccagcctggccgaggtatacggcaacgacggcccctgcgcg 1038
Query: 1072 ctcgcatcggtgaagaccaacttcggacacacccagtcgaccgc 1115
|| ||||||||||||||||| ||||| |||||||||||| ||||
Sbjct: 1039 ctggcatcggtgaagaccaatttcggccacacccagtcggccgc 1082
Score = 174 bits (88), Expect = 5e-43
Identities = 472/600 (78%)
Strand = Plus / Plus
Query: 4278 cggcatgcgcctgcagatccgtacccccggcgatatgcaaacgatagagctggccgcgtt 4337
|||||||||||| ||||||||||| ||||| || ||||||| | ||| | ||||||||
Sbjct: 4257 cggcatgcgcctacagatccgtactcccggtgacctgcaaaccttggagttcgccgcgtt 4316
Query: 4338 tcaccgcgttccaccaggaccaggacagatcgaggttgcggtccgtgcgtccagcgtcaa 4397
|||| || || || || || ||| |||||||||| || ||| ||||||||| ||||
Sbjct: 4317 cgaccgggtcccgccgggcccgggagagatcgaggtcgccgtcaccgcgtccagcatcaa 4376
Query: 4398 ctttgccgatgtactcatcgctttcggtcgctaccccagcttcgagggacacctgcccca 4457
||| ||||| || || || | ||||| ||||||| | | |||| || | | ||| ||
Sbjct: 4377 cttcgccgacgtgctggtcaccttcggccgctaccaaaccctcgacgggcgacagccgca 4436
Query: 4458 gctgggcacggatttcgccggcgtggtgaccgcggtcggaccaggcgtcactgaccacaa 4517
||||||||| ||||||||||| ||||||| ||||||||| || || |||| || | |||
Sbjct: 4437 gctgggcaccgatttcgccggggtggtgagcgcggtcgggcccggggtcagcgaactcaa 4496
Query: 4518 ggttggtgaccatgttggtggcatgtcgcctaacggctgctggggcacattcgtcacgtg 4577
||| ||||||| || || |||||||| || ||||||||||||| ||| |||||||| ||
Sbjct: 4497 ggtcggtgaccgggtcggcggcatgtcacccaacggctgctgggccacgttcgtcacctg 4556
Query: 4578 tgacgctcggctggccgcgacgctgccaccgggcctgggtgacgcacaggccgctgcggt 4637
||||| || |||||| | | ||||| ||| ||| ||||| || ||||| || ||
Sbjct: 4557 cgacgcccgcctggccaccagactgcccgaggggctgaccgacgcccaagccgcggcagt 4616
Query: 4638 gaccaccgcgcacgccaccgcctggtacggactgcatgagctcgcccggattagggcggg 4697
||||||||| ||||||||| |||||||| ||||| || || || ||||| | ||| ||
Sbjct: 4617 gaccaccgccagcgccaccgcgtggtacgggctgcaggacctggcgcggatcaaggccgg 4676
Query: 4698 tgacacggtgctaattcactccggcaccggcggggtcggacaagcggcgatcgctatagc 4757
|||| |||||| || ||||||| ||||||||| || || || || || ||||| || ||
Sbjct: 4677 cgacaaggtgctcatccactccgccaccggcggagtgggccaggccgcaatcgcgatcgc 4736
Query: 4758 ccgcgcggcgggcgctgagatcttcgccaccgccggtaccccacagcgtcgagagctatt 4817
|| ||||| || || |||||| ||||||||| || | | | |||||||||| || |
Sbjct: 4737 gcgtgcggccggagcccagatctacgccaccgcaggcaacgaaaagcgtcgagacctgct 4796
Query: 4818 gcgcaacatgggtattgagcatgtctatgactcgcgcagcatcgagttcgccgagcagat 4877
|||| ||||||| || || || |||||||||||||||||| |||||||||||||||||||
Sbjct: 4797 gcgcgacatgggcatcgaacacgtctatgactcgcgcagcgtcgagttcgccgagcagat 4856
Score = 125 bits (63), Expect = 5e-28
Identities = 204/251 (81%)
Strand = Plus / Plus
Query: 1627 cccgcggtggggcaggatgaccgcgggccggtctggttattctccgggcaagggtcgcag 1686
|||||||| || || || |||||||| ||||||||| | |||||||||||||| |||||
Sbjct: 1606 cccgcggtcggccaagacgaccgcggaccggtctgggtgttctccgggcaaggctcgcaa 1665
Query: 1687 tgggcagcgatgggcgccgatctgctgacgaacgaatcggtgttcgccgcgaccgttgcg 1746
||||| | ||||||||||| |||||| | | |||| |||| |||||||| ||| | ||
Sbjct: 1666 tgggcgggcatgggcgccgacctgctggccaccgaaccggtattcgccgccaccatcgcc 1725
Query: 1747 gagctagagccattgatcgccgcggagtccgggttctcggtcaccgaggcgatgacggcg 1806
| | | || ||| ||||||||||||| ||||| |||||||| ||||| || ||||| ||
Sbjct: 1726 gcgatcgaaccactgatcgccgcggaatccggcttctcggtgaccgaagccatgaccgcc 1785
Query: 1807 cccgagaccgtgactggcatcgacagagttcagccgaccatcttcgcgatgcaggtcgcg 1866
|||||| |||||| ||||||||| | || || |||||| | || || ||||||||||||
Sbjct: 1786 cccgaggtcgtgaccggcatcgaccgggtgcaaccgaccctgtttgccatgcaggtcgcg 1845
Query: 1867 ttggcagccac 1877
|||| |||||
Sbjct: 1846 ctggcggccac 1856
Score = 109 bits (55), Expect = 3e-23
Identities = 85/95 (89%)
Strand = Plus / Plus
Query: 5150 tgccgatgccgcagagcacccattaccccctcgtcgaggcggccaccgccatccgtgtga 5209
|||||||||||||||||||||||||||| || | ||||||||||||||| ||||| ||||
Sbjct: 5129 tgccgatgccgcagagcacccattacccgctggccgaggcggccaccgcgatccgggtga 5188
Query: 5210 tgggcaacgccgagcacaccggcaaactcgtcctc 5244
||||| ||||||||||||||||| ||| |||||
Sbjct: 5189 tgggcgcggccgagcacaccggcaagctcatcctc 5223
Score = 101 bits (51), Expect = 7e-21
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 5560 ggcgtgctacacgcggccgcggtggtcgaggacgccaccttggccaatatcaccgacga 5618
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 5539 ggcgtgctgcacgcggccgcggtggtcgaggacgccaccttggccaacatcaccgacga 5597
Score = 97.6 bits (49), Expect = 1e-19
Identities = 169/209 (80%)
Strand = Plus / Plus
Query: 2734 gccgtgcacccgttgttgggcgcacacgtgcgattgcccgaagagccggaacgccacgcc 2793
||||| ||||| ||| ||||| | |||||||| ||||||| |||||||||||||||| |
Sbjct: 2707 gccgtacacccattgctgggctcccacgtgcgcctgcccgaggagccggaacgccacgtc 2766
Query: 2794 tggcaggccgatgttggtaccgcaaccttgccctggttgggcgatcaccggatacacaac 2853
||||||| ||| || || |||| || |||||| ||| |||||||| || ||| |
Sbjct: 2767 tggcagggcgaggtcggcaccgtgacacaaccctggctggccgatcaccaaatccacggc 2826
Query: 2854 gtggctgctcttccaggggccgcctactgcgagatggcgttgtctgcggcccgtgccgtc 2913
| ||| || ||||| || |||||||||||||||||||||||| | || ||||| ||||||
Sbjct: 2827 gcggccgcccttccgggagccgcctactgcgagatggcgttggccgcagcccgcgccgtc 2886
Query: 2914 ctcggcgagcagtccgaagtacgcgacat 2942
|||||||| |||||||| ||||||||
Sbjct: 2887 ctcggcgaagcctccgaagtccgcgacat 2915
Score = 91.7 bits (46), Expect = 6e-18
Identities = 250/318 (78%)
Strand = Plus / Plus
Query: 65 cacgtgtgactccggttgctgttatcggcatggcttgccggctgcccggcgggatcgatt 124
||||||| || ||||| ||||| || || |||| ||||||||||| || || ||||| |
Sbjct: 35 cacgtgttacgccggtagctgtcattggtatggggtgccggctgccggggggcatcgact 94
Query: 125 cccccgagttgttgtggaaggcgttgttacgaggcgacgacctgatcaccgaggtgccgc 184
| ||||| ||||||| |||||||| | || |||||||| ||| |||||||| | ||
Sbjct: 95 cacccgatcggttgtgggaggcgttgctgcggggcgacgatctggtcaccgagatccccg 154
Query: 185 cggaccggtgggattgcgacgagttctacgacccgcagccgggcgtgcccggtcggacgg 244
| ||||| ||||| |||||||| ||||||||| | || ||||||||||| || || |
Sbjct: 155 ccgaccgctgggacatcgacgagtactacgaccccgaacccggcgtgcccggacgcaccg 214
Query: 245 tgtgcaagtggggcggtttcctggataaccccgcggatttcgattgcgagttctttggca 304
||||| ||||||| | ||| |||||| || || || ||| ||||||||| || |
Sbjct: 215 actgcaaatggggcgcgtacctcgataacgtcggcgactttgatcccgagttcttcggga 274
Query: 305 tcggcgagcgggaggcgattgcgatcgatccgcagcaacgtctgttgctggagacgtcct 364
|||| ||| || ||||| ||||||||||||||||| || |||||||||| || ||||
Sbjct: 275 tcggggagaaagaagcgatagcgatcgatccgcagcaccgcttgttgctggaaacctcct 334
Query: 365 gggaggccatggagcacg 382
|||| |||||||||||||
Sbjct: 335 gggaagccatggagcacg 352
Score = 89.7 bits (45), Expect = 3e-17
Identities = 132/161 (81%)
Strand = Plus / Plus
Query: 2104 gtggtcgccgtggtgaccgcgccgcagtccaccgtgatcgccggaggcaccgagtcggtg 2163
|||||||| |||||| || | ||||||||||||||||||| ||| | |||| || ||||
Sbjct: 2083 gtggtcgcggtggtggcctccccgcagtccaccgtgatcggcggggccacccagacggta 2142
Query: 2164 cgcaagctggtcgacatatgggagcggcgagacgtgctggcgcgggcggtggccgtcgac 2223
||| | ||||| | | ||||||| || ||||||||||| || | |||||||||||||
Sbjct: 2143 cgcgacctggtggccgcctgggagcaacgcgacgtgctggcccgtgaggtggccgtcgac 2202
Query: 2224 gtggcttcgcattcgccgcaggtggatccgatcctcgacga 2264
|| || ||||| || |||||||| || ||||||||||||||
Sbjct: 2203 gtagcatcgcactccccgcaggtcgacccgatcctcgacga 2243
Score = 83.8 bits (42), Expect = 2e-15
Identities = 78/90 (86%)
Strand = Plus / Plus
Query: 5287 gaacaagctcaggtgttccgtcccgacggctcctacatcatcaccggcggcctcggtggg 5346
||||| |||| ||| |||||| | ||||| ||||||||||||||||| ||||| ||||||
Sbjct: 5266 gaacaggctcgggttttccgttcagacgggtcctacatcatcaccggtggcctgggtggg 5325
Query: 5347 ctagggctgttcctggccgagaagatggcc 5376
|| || | |||||||||||||||||||||
Sbjct: 5326 ctgggcttattcctggccgagaagatggcc 5355
Score = 69.9 bits (35), Expect = 2e-11
Identities = 92/111 (82%)
Strand = Plus / Plus
Query: 2384 tgcgccacaccgtgcggttctccgctgcggtgcgctcggcgctcgacgacgggtaccgag 2443
||||||||||||| || ||| |||| ||||||| | || ||||| ||||| ||||| |
Sbjct: 2363 tgcgccacaccgtacgcttcgccgcggcggtgcaagccgccctcgaagacggctaccggg 2422
Query: 2444 tcttcgccgagctttcgccgcacccgctgctgacccacgcggtcgatcaga 2494
||||| ||||||| | || ||||| |||||||||||||||||||| ||||
Sbjct: 2423 tcttcaccgagctgaccccccaccccctgctgacccacgcggtcgaccaga 2473
Score = 61.9 bits (31), Expect = 6e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 5734 ggctcgccgggacagagtgcctactcagcggccaacagctggctggacgccttcgcgcat 5793
||||||||||| ||| | |||||| | ||||||||||||||||||||| ||||| | ||
Sbjct: 5713 ggctcgccgggtcagggcgcctacgccgcggccaacagctggctggacaccttcacccac 5772
Query: 5794 tggcggc 5800
|||||||
Sbjct: 5773 tggcggc 5779
Score = 58.0 bits (29), Expect = 9e-08
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 577 gataccgcatgctcgtccggcctgacggccgtgcacatggcgtgtcgcagcctgcacgag 636
||||||||||||||||| ||||| || || | ||| |||| ||||| |||||||||||
Sbjct: 544 gataccgcatgctcgtctggcctcaccgctatccacctggcttgtcgtagcctgcacgac 603
Query: 637 ggtgaaagcgacgttgc 653
|| ||||||||| ||||
Sbjct: 604 ggcgaaagcgacattgc 620
Score = 52.0 bits (26), Expect = 5e-06
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 5929 cccgacgaaggtgcttacgcgttcgaggcgctattgcgccacaaccgcgtctataccggc 5988
||||| ||||| || ||||| |||||| | || ||||||||||||||| ||| | ||||
Sbjct: 5878 cccgaggaaggcgcctacgccttcgagaccctgctgcgccacaaccgcgcctacagcggc 5937
Query: 5989 tatgccccggtcatcgga 6006
|| |||||||| ||||||
Sbjct: 5938 tacgccccggtgatcgga 5955
>lcl|NC_000962.2_cdsid_NP_217456.1 [gene=mas] [protein=multifunctional
mycocerosic acid synthase membrane-associated MAS]
[protein_id=NP_217456.1]
[location=complement(3276380..3282715)]
Length = 6336
Score = 127 bits (64), Expect = 1e-28
Identities = 243/302 (80%), Gaps = 3/302 (0%)
Strand = Plus / Plus
Query: 1654 ccggtctggttattctccgggcaagggtcgcagtgggcagcgatgggcgccgatctgctg 1713
||||||||| | |||||||||||||||||||||||||| ||||||||| | | ||||
Sbjct: 1597 ccggtctgggtcttctccgggcaagggtcgcagtgggcggcgatgggcacgcaattgctc 1656
Query: 1714 acgaacgaatcggtgttcgccgcgaccgttgcggagctagagccattgatcgccgcggag 1773
| | |||| | |||||||| || ||| | || |||| ||||| |||||||||| ||
Sbjct: 1657 gccagcgaaccagtgttcgcggccaccatcgccaagctggagccggtgatcgccgcagaa 1716
Query: 1774 tccgggttctcggtcaccgaggcgatgacggcgcccgagaccgtgactggcatcgacaga 1833
|| || |||||||| ||||||||||| ||||||| |||||||||| || ||||||| |
Sbjct: 1717 tcgggattctcggtgaccgaggcgataacggcgcagcagaccgtgaccggaatcgacaaa 1776
Query: 1834 gttcagccgaccatcttcgcgatgcaggtcgcgttggcagccacgatggcg---gcatac 1890
|| |||||| | | ||||| | |||||||||||||| ||||| |||| | | |||
Sbjct: 1777 gtgcagccggcagtgttcgccgttcaggtcgcgttggccgccaccatggagcaaacctac 1836
Query: 1891 ggagtgcgcccgggcgccgtgatcggccactcaatgggtgagtcggccgcggctgtggtc 1950
|||||||| |||||||| || |||| ||||| |||||||||||||||||||| || |||
Sbjct: 1837 ggagtgcggccgggcgcggtcgtcggacactcgatgggtgagtcggccgcggccgtcgtc 1896
Query: 1951 gc 1952
||
Sbjct: 1897 gc 1898
Score = 97.6 bits (49), Expect = 1e-19
Identities = 103/121 (85%)
Strand = Plus / Plus
Query: 5284 ccggaacaagctcaggtgttccgtcccgacggctcctacatcatcaccggcggcctcggt 5343
||||| ||||||| | ||| ||| | |||||||||||||||||||||||||||||| |||
Sbjct: 5263 ccggagcaagctccgctgtaccgccgcgacggctcctacatcatcaccggcggcctgggt 5322
Query: 5344 gggctagggctgttcctggccgagaagatggccgcggccggttgcggccggatcgtgctg 5403
|| || || |||||| | ||| |||| |||||||||| || || |||||||||||||||
Sbjct: 5323 ggcctcggcctgttcttcgcctcgaagctggccgcggcgggctgtggccggatcgtgctg 5382
Query: 5404 a 5404
|
Sbjct: 5383 a 5383
Score = 93.7 bits (47), Expect = 2e-18
Identities = 146/179 (81%)
Strand = Plus / Plus
Query: 4817 tgcgcaacatgggtattgagcatgtctatgactcgcgcagcatcgagttcgccgagcaga 4876
||||| ||||||| | ||||||||||| || ||||||||| ||||||||||||||||||
Sbjct: 4796 tgcgcgacatgggcgtcgagcatgtctacgattcgcgcagcgtcgagttcgccgagcaga 4855
Query: 4877 ttcggcgggacactaacggccggggtgtcgatgtcgtgctcaactcggtgaccggcgccg 4936
| ||||| ||||| |||| || || ||| ||||||| |||||| ||||||||||||
Sbjct: 4856 tccggcgcgacaccgacgggtacggcgtggatatcgtgctgaactcgctgaccggcgccg 4915
Query: 4937 cgcaacttgccgggctgaaactgctcgccttccggggacggttcgtcgagattggcaag 4995
| |||| ||| |||||| | || | |||||| | ||||| |||||||| || ||||||
Sbjct: 4916 cccaacgtgcggggctggagttgttggccttcggcggacgcttcgtcgaaatcggcaag 4974
Score = 87.7 bits (44), Expect = 1e-16
Identities = 193/240 (80%), Gaps = 2/240 (0%)
Strand = Plus / Plus
Query: 2314 tactattcggcgacgcttttcgacccgcgcgaagcgccggcgtgcgacgcgcg-ttactg 2372
||||| |||||||| || |||||||||||||| ||||| |||||| | ||| ||||||
Sbjct: 2260 tactactcggcgaccctgttcgacccgcgcgagcagccggtgtgcgatg-gcgcttactg 2318
Query: 2373 ggccgacaatttgcgccacaccgtgcggttctccgctgcggtgcgctcggcgctcgacga 2432
|| |||||| ||||| |||| |||| |||| |||| ||||||| | ||| | || ||
Sbjct: 2319 ggtggacaatctgcgcaacacggtgcagttcgccgcggcggtgcaggctgcgatggagga 2378
Query: 2433 cgggtaccgagtcttcgccgagctttcgccgcacccgctgctgacccacgcggtcgatca 2492
||| ||||| |||||||| ||||| ||||| ||||||||||| |||||||| ||||| ||
Sbjct: 2379 cggctaccgggtcttcgcggagctgtcgccccacccgctgcttacccacgccgtcgaaca 2438
Query: 2493 gattgccggcagtgtaggcatgccggttgccgcgctggccggtatgcggcgggagcagcc 2552
|| | | | || | | |||| |||| ||||| |||||||| |||||||| ||||||||
Sbjct: 2439 gacgggccgaagcctcgacatgtcggtcgccgccctggccggcatgcggcgagagcagcc 2498
Score = 79.8 bits (40), Expect = 2e-14
Identities = 124/152 (81%)
Strand = Plus / Plus
Query: 5686 cagccgcttgactggttctgcttgttttcgtcggcggcagctctcaccggctcgccggga 5745
|||||||| ||||||||||||||||| || |||| || || | ||||||||||||
Sbjct: 5665 cagccgctggactggttctgcttgttctcctcgggagcggcattgctcggctcgccgggt 5724
Query: 5746 cagagtgcctactcagcggccaacagctggctggacgccttcgcgcattggcggcaagct 5805
||| | |||||| | ||||||||||||||| | |||| ||||||||| ||||| | ||
Sbjct: 5725 cagggcgcctacgcggcggccaacagctgggtcgacgtcttcgcgcactggcgccgcgcc 5784
Query: 5806 cagggcctgccggctaccgcgatcgcgtgggg 5837
||||||||||||| | |||||| ||||||||
Sbjct: 5785 cagggcctgccggtcagcgcgattgcgtgggg 5816
Score = 77.8 bits (39), Expect = 1e-13
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 2182 tgggagcggcgagacgtgctggcgcgggcggtggccgtcgacgtggcttcgcattcgccg 2241
||||||| ||| |||||| ||||||| | |||||||||||||||||| ||||| |||||
Sbjct: 2128 tgggagcagcgggacgtgatggcgcgcgaggtggccgtcgacgtggcgtcgcactcgcct 2187
Query: 2242 caggtggatccgatcctcgacga 2264
|| || |||||||| ||||||||
Sbjct: 2188 caagtcgatccgatactcgacga 2210
Score = 73.8 bits (37), Expect = 1e-12
Identities = 85/101 (84%)
Strand = Plus / Plus
Query: 3269 tgctggccgaagtcgcgctgcccggctcgattcgttcgcagcagggcctgtacgcaatcc 3328
|||||||||| ||||||||||||| ||||| || | ||||||||| ||| |||||
Sbjct: 3209 tgctggccgaggtcgcgctgcccgcgtcgatccggttccagcagggcgcctaccgaatcc 3268
Query: 3329 acccggccctcctggatgcctgtttccagtcggtcggcgcg 3369
||||||| || ||||| || |||||||||||||||||||||
Sbjct: 3269 acccggcgctgctggacgcttgtttccagtcggtcggcgcg 3309
Score = 65.9 bits (33), Expect = 4e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 5184 cgaggcggccaccgccatccgtgtgatgggcaacgccgagcacaccggcaaactcgt 5240
|||||||||| ||||||||| | ||| ||||||||||||||||||||||||||||
Sbjct: 5163 cgaggcggccgacgccatccgggcaatgagcaacgccgagcacaccggcaaactcgt 5219
Score = 52.0 bits (26), Expect = 5e-06
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 308 gcgagcgggaggcgattgcgatcgatccgcagcaacgtctgttgctggagacgtcctggg 367
|||||||||| |||| |||||||||||||||| || || ||||||| ||||| ||||
Sbjct: 251 gcgagcgggaagcgacctcgatcgatccgcagcagcggctactgctggaaacgtcgtggg 310
Query: 368 aggccatggagcacgccggtct 389
|||| || ||||| || |||||
Sbjct: 311 aggcgatcgagcatgctggtct 332
Score = 52.0 bits (26), Expect = 5e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 2863 cttccaggggccgcctactgcgagatggcgttgtctgcggcc 2904
||||| || |||||||||||||||||||| ||| ||||||||
Sbjct: 2809 cttcccggcgccgcctactgcgagatggctttggctgcggcc 2850
Score = 52.0 bits (26), Expect = 5e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 5542 accgggcttccggtacgaggcgtgctacacgcggccgcggtggtcgaggacgccaccttg 5601
|||||||||||| | || || ||||| ||| |||| |||||||||||||| ||||| ||
Sbjct: 5521 accgggcttccgctgcgcggtgtgctgcactcggcggcggtggtcgaggatgccacgctg 5580
Query: 5602 gccaatatcaccga 5615
|||| ||||||||
Sbjct: 5581 accaacatcaccga 5594
>lcl|NC_000962.2_cdsid_NP_215697.1 [gene=pks4] [protein=polyketide
beta-ketoacyl synthase PKS4] [protein_id=NP_215697.1]
[location=1315234..1319982]
Length = 4749
Score = 99.6 bits (50), Expect = 3e-20
Identities = 194/242 (80%)
Strand = Plus / Plus
Query: 1624 cagcccgcggtggggcaggatgaccgcgggccggtctggttattctccgggcaagggtcg 1683
|||||||| |||||||| || |||||||||||||| ||| | |||||||||||||| ||
Sbjct: 70 cagcccgcagtggggcacgacgaccgcgggccggtgtgggtgttctccgggcaaggctct 129
Query: 1684 cagtgggcagcgatgggcgccgatctgctgacgaacgaatcggtgttcgccgcgaccgtt 1743
|||||| | | ||||||| | || |||||| |||| ||||||||||||| |||||
Sbjct: 130 cagtggcccgggatgggcactgaactgctggtagccgaaccggtgttcgccgccaccgtc 189
Query: 1744 gcggagctagagccattgatcgccgcggagtccgggttctcggtcaccgaggcgatgacg 1803
|||| | | ||||| ||||||| |||||| ||||| ||||| ||||| |||||| ||
Sbjct: 190 gcggcgatggagccggtgatcgctagggagtcagggttttcggtgaccgaagcgatgtcg 249
Query: 1804 gcgcccgagaccgtgactggcatcgacagagttcagccgaccatcttcgcgatgcaggtc 1863
||||| |||| || | || || ||| | || ||||| |||||||||||| ||||||||
Sbjct: 250 gcgccacagacggtcagcggtattgaccgggtgcagcccaccatcttcgcggtgcaggtc 309
Query: 1864 gc 1865
||
Sbjct: 310 gc 311
Score = 79.8 bits (40), Expect = 2e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 5551 ccggtacgaggcgtgctacacgcggccgcggtggtcgaggacgccaccttggccaatatc 5610
||||| || |||||||| |||||||| ||||||||||||||||| || ||||||||| ||
Sbjct: 3961 ccggtgcgcggcgtgctgcacgcggcggcggtggtcgaggacgctacgttggccaatgtc 4020
Query: 5611 accgacga 5618
||||||||
Sbjct: 4021 accgacga 4028
Score = 65.9 bits (33), Expect = 4e-10
Identities = 153/193 (79%)
Strand = Plus / Plus
Query: 4823 acatgggtattgagcatgtctatgactcgcgcagcatcgagttcgccgagcagattcggc 4882
|||||||| | ||||||||||| ||||| || |||| |||||||||||||||||| ||
Sbjct: 3233 acatgggtgtcgagcatgtctacgactcacggagcaccgagttcgccgagcagatccgag 3292
Query: 4883 gggacactaacggccggggtgtcgatgtcgtgctcaactcggtgaccggcgccgcgcaac 4942
| ||||| | || |||||||| ||||| ||||||||| || |||||||||| ||||
Sbjct: 3293 gcgacaccgatgggtatggtgtcgacgtcgtactcaactcgctgcccggcgccgcacaac 3352
Query: 4943 ttgccgggctgaaactgctcgccttccggggacggttcgtcgagattggcaagcgcgaca 5002
||| ||| | || |||| ||||| | || || ||||| ||||| ||||| || ||||
Sbjct: 3353 gtgctgggatcgaattgctggcctttggcgggcgattcgtggagatcggcaaacgtgaca 3412
Query: 5003 tctatggtgacac 5015
|||| || |||||
Sbjct: 3413 tctacggcgacac 3425
Score = 63.9 bits (32), Expect = 1e-09
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 5761 gcggccaacagctggctggacgccttcgcgcattggcggcaagctcagggcctgccggct 5820
||||||||||||||| ||||||| || || || ||||||| || |||||||| ||||||
Sbjct: 4171 gcggccaacagctggttggacgcttttgcccactggcggcgggcgcagggccttccggct 4230
Query: 5821 accgcgatcgcgtggggagc 5840
||| | ||||| ||||||||
Sbjct: 4231 acctcaatcgcctggggagc 4250
Score = 58.0 bits (29), Expect = 9e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 2422 gcgctcgacgacgggtaccgagtcttcgccgagctttcgccgcacccgctgctgacccac 2481
|||||| | |||||||||||||| |||| |||||| | ||||| |||||||| ||| ||
Sbjct: 868 gcgctcaaggacgggtaccgagtgttcggcgagctggctccgcatccgctgctcacctac 927
Query: 2482 gcggtcgatcaga 2494
|||||||| ||||
Sbjct: 928 gcggtcgagcaga 940
Score = 52.0 bits (26), Expect = 5e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 2842 cggatacacaacgtggctgctcttccaggggccgcctactgcgagatggc 2891
|||||||||||||||||||| |||| || || |||||||| ||||||||
Sbjct: 1285 cggatacacaacgtggctgcgtttcccggtgcggcctactgtgagatggc 1334
>lcl|NC_000962.2_cdsid_NP_215696.1 [gene=pks3] [protein=polyketide
beta-ketoacyl synthase PKS3] [protein_id=NP_215696.1]
[location=1313725..1315191]
Length = 1467
Score = 63.9 bits (32), Expect = 1e-09
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 85 gttatcggcatggcttgccggctgcccggcgggatcgattcccc 128
||||||||||||||||||||||| || ||||| |||||||||||
Sbjct: 31 gttatcggcatggcttgccggctcccgggcggcatcgattcccc 74
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00227 133080 134834 len=1755
(1755 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218343.1 [gene=fadD23] [protein=acyl-Co... 3479 0.0
lcl|NC_000962.2_cdsid_NP_217457.1 [gene=fadD28] [protein=acyl-Co... 115 1e-25
lcl|NC_000962.2_cdsid_NP_216045.1 [gene=fadD24] [protein=acyl-Co... 90 7e-18
lcl|NC_000962.2_cdsid_NP_216037.1 [gene=fadD25] [protein=acyl-Co... 72 2e-12
lcl|NC_000962.2_cdsid_NP_217446.2 [gene=fadD26] [protein=acyl-Co... 70 6e-12
>lcl|NC_000962.2_cdsid_NP_218343.1 [gene=fadD23] [protein=acyl-CoA
synthetase] [protein_id=NP_218343.1]
[location=4299812..4301566]
Length = 1755
Score = 3479 bits (1755), Expect = 0.0
Identities = 1755/1755 (100%)
Strand = Plus / Plus
Query: 1 atggtttcgctttccatcccctcgatgttgcgccagtgcgtcaacctgcacccggacggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggtttcgctttccatcccctcgatgttgcgccagtgcgtcaacctgcacccggacggc 60
Query: 61 acggcattcacttacatcgattacgaacgggattcggagggcataagtgaaagcctgacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acggcattcacttacatcgattacgaacgggattcggagggcataagtgaaagcctgacg 120
Query: 121 tggtcgcaggtgtatcggcgaaccctaaacgttgcagcagaagtccgccgccatgccgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggtcgcaggtgtatcggcgaaccctaaacgttgcagcagaagtccgccgccatgccgca 180
Query: 181 attggtgaccgtgcagtgatattggccccacaaggactcgattatattgttgcttttctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attggtgaccgtgcagtgatattggccccacaaggactcgattatattgttgcttttctg 240
Query: 241 ggcgctttacaggccggtcttattgcggttccactttcggctccgctcggcggcgccagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggcgctttacaggccggtcttattgcggttccactttcggctccgctcggcggcgccagc 300
Query: 301 gatgaacgtgttgacgcggtagtgcgtgacgcgaaacccaatgtcgttctgacaacatcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatgaacgtgttgacgcggtagtgcgtgacgcgaaacccaatgtcgttctgacaacatcc 360
Query: 361 gcgataatgggcgatgtcgtcccgcgcgttacgccaccgcccggtattgccagcccgcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcgataatgggcgatgtcgtcccgcgcgttacgccaccgcccggtattgccagcccgcca 420
Query: 421 acggttgcggtcgatcaactagatctggactcgccgatacgatctaatattgtggacgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acggttgcggtcgatcaactagatctggactcgccgatacgatctaatattgtggacgat 480
Query: 481 tctctccaaacaaccgcatatttgcagtatacgtcgggatcgacccgcacacctgccggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tctctccaaacaaccgcatatttgcagtatacgtcgggatcgacccgcacacctgccggt 540
Query: 541 gtaatgattacctacaagaatatattggcaaatttccagcagatgatttccgcctatttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtaatgattacctacaagaatatattggcaaatttccagcagatgatttccgcctatttc 600
Query: 601 gccgacaccggagccgtaccgccattggaccttttcattatgtcgtggctaccgttctat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gccgacaccggagccgtaccgccattggaccttttcattatgtcgtggctaccgttctat 660
Query: 661 catgacatgggtttggttctgggagtttgtgcgccgattatcgtaggatgcggcgctgtg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 catgacatgggtttggttctgggagtttgtgcgccgattatcgtaggatgcggcgctgtg 720
Query: 721 ctcacaagcccggtggcgtttctgcagcgaccagcccggtggctgcaattgatggcacgc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ctcacaagcccggtggcgtttctgcagcgaccagcccggtggctgcaattgatggcacgc 780
Query: 781 gagggccaggcgttttcggcggcaccgaacttcgccttcgaactgacggcagcaaaagca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gagggccaggcgttttcggcggcaccgaacttcgccttcgaactgacggcagcaaaagca 840
Query: 841 atagatgacgacttggccgggctcgaccttggacggatcaaaaccatcctctgcggcagt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 atagatgacgacttggccgggctcgaccttggacggatcaaaaccatcctctgcggcagt 900
Query: 901 gaaagggtgcatccggcgaccctcaagcgctttgtcgaccggtttagccgtttcaatctt 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gaaagggtgcatccggcgaccctcaagcgctttgtcgaccggtttagccgtttcaatctt 960
Query: 961 cgagaattcgcaattcggcccgcgtacggactcgcggaagccacggtgtatgtggcgacc 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 cgagaattcgcaattcggcccgcgtacggactcgcggaagccacggtgtatgtggcgacc 1020
Query: 1021 agccaagccggccaacccccagaaatccgttacttcgaaccccacgaactttccgctggg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 agccaagccggccaacccccagaaatccgttacttcgaaccccacgaactttccgctggg 1080
Query: 1081 caggccaagccgtgcgcaaccggggcgggcacagctctggtcagttacccgctgccgcaa 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 caggccaagccgtgcgcaaccggggcgggcacagctctggtcagttacccgctgccgcaa 1140
Query: 1141 tcacccattgttcggatcgtcgatcccaacaccaataccgagtgcccacccggaacaatc 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 tcacccattgttcggatcgtcgatcccaacaccaataccgagtgcccacccggaacaatc 1200
Query: 1201 ggtgagatctgggtacacggcgacaatgtcgccggcggctattgggaaaagcctgacgag 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ggtgagatctgggtacacggcgacaatgtcgccggcggctattgggaaaagcctgacgag 1260
Query: 1261 actgaacgcaccttcggaggagcactggtcgctccctcggccggcacacccgtagggcct 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 actgaacgcaccttcggaggagcactggtcgctccctcggccggcacacccgtagggcct 1320
Query: 1321 tggctacgaactggcgactcgggcttcgtgtctgaggacaagtttttcatcatcggcaga 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 tggctacgaactggcgactcgggcttcgtgtctgaggacaagtttttcatcatcggcaga 1380
Query: 1381 ataaaggatctgttgattgtttacggccgcaatcattctcccgacgacatcgaggcaacg 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 ataaaggatctgttgattgtttacggccgcaatcattctcccgacgacatcgaggcaacg 1440
Query: 1441 atccaggagatcactcggggccgctgtgcggcgatagcggttccgagcaatggcgtggag 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 atccaggagatcactcggggccgctgtgcggcgatagcggttccgagcaatggcgtggag 1500
Query: 1501 aagctcgttgccatcgtcgaactcaacaaccgcggcaacttggacacagagaggctgagc 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 aagctcgttgccatcgtcgaactcaacaaccgcggcaacttggacacagagaggctgagc 1560
Query: 1561 ttcgtcacgcgtgaagtcacctcggcgatatccacctcgcatggattgagcgtgtcggat 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 ttcgtcacgcgtgaagtcacctcggcgatatccacctcgcatggattgagcgtgtcggat 1620
Query: 1621 ctggttctggtggcgcccggctcgattccgatcaccacgagcggcaaggtcagacgtgcc 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 ctggttctggtggcgcccggctcgattccgatcaccacgagcggcaaggtcagacgtgcc 1680
Query: 1681 gagtgtgtgaagctgtatcgacacaacgagttcacccggttggacgctaagccgttgcaa 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 gagtgtgtgaagctgtatcgacacaacgagttcacccggttggacgctaagccgttgcaa 1740
Query: 1741 gcgagcgatctttag 1755
|||||||||||||||
Sbjct: 1741 gcgagcgatctttag 1755
>lcl|NC_000962.2_cdsid_NP_217457.1 [gene=fadD28] [protein=acyl-CoA
synthetase] [protein_id=NP_217457.1]
[location=3283335..3285077]
Length = 1743
Score = 115 bits (58), Expect = 1e-25
Identities = 229/286 (80%)
Strand = Plus / Plus
Query: 1199 tcggtgagatctgggtacacggcgacaatgtcgccggcggctattgggaaaagcctgacg 1258
|||| ||||||||||| ||||||||||| ||||| ||||||||| |||| || ||||
Sbjct: 1199 tcggcgagatctgggtgcacggcgacaacgtcgctaatggctattggcaaaaacccgacg 1258
Query: 1259 agactgaacgcaccttcggaggagcactggtcgctccctcggccggcacacccgtagggc 1318
||| ||| ||||| ||||| ||| | ||| | || ||| | |||||||||| ||| |
Sbjct: 1259 agagtgagcgcacgttcggcggaaagattgtcaccccttcgccgggcacacccgaaggtc 1318
Query: 1319 cttggctacgaactggcgactcgggcttcgtgtctgaggacaagtttttcatcatcggca 1378
|||||||| |||| |||||||| || ||||| | || | ||| | |||||||||||
Sbjct: 1319 cttggctaagaacgggcgactcaggtttcgtcaccgatggcaaaatgttcatcatcggtc 1378
Query: 1379 gaataaaggatctgttgattgtttacggccgcaatcattctcccgacgacatcgaggcaa 1438
| || || ||||| | ||||| ||||| ||||| || || |||||||||||||||||||
Sbjct: 1379 ggatcaaagatctcctaattgtgtacggacgcaaccactcccccgacgacatcgaggcaa 1438
Query: 1439 cgatccaggagatcactcggggccgctgtgcggcgatagcggttcc 1484
|||||||||||||||| || || ||||| |||||||| |||||||
Sbjct: 1439 cgatccaggagatcacccgcgggcgctgcgcggcgatctcggttcc 1484
Score = 60.0 bits (30), Expect = 6e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 1616 cggatctggttctggtggcgcccggctcgattccgatcaccacgagcggcaaggtcag 1673
|||||||||||||||| ||||| |||||||| || || ||||| ||||| ||||||||
Sbjct: 1628 cggatctggttctggttgcgcctggctcgatccccattaccaccagcgggaaggtcag 1685
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 114 cctgacgtggtcgcaggtgtatcggcgaac 143
|||||||||||||||| |||||||||||||
Sbjct: 114 cctgacgtggtcgcagctgtatcggcgaac 143
>lcl|NC_000962.2_cdsid_NP_216045.1 [gene=fadD24] [protein=acyl-CoA
synthetase] [protein_id=NP_216045.1]
[location=1729502..1731256]
Length = 1755
Score = 89.7 bits (45), Expect = 7e-18
Identities = 150/185 (81%)
Strand = Plus / Plus
Query: 1297 tcggccggcacacccgtagggccttggctacgaactggcgactcgggcttcgtgtctgag 1356
||||| |||||||||| || ||||||||| ||||| || || ||||| ||||| || |
Sbjct: 1312 tcggcgggcacacccgaagcgccttggctgcgaaccggggattcgggtttcgtctccggc 1371
Query: 1357 gacaagtttttcatcatcggcagaataaaggatctgttgattgtttacggccgcaatcat 1416
| | || | |||||||||||| | || ||||| || |||||||| || || ||||| ||
Sbjct: 1372 ggcgagctgttcatcatcggccgcatcaaggacctcttgattgtgtatgggcgcaaccac 1431
Query: 1417 tctcccgacgacatcgaggcaacgatccaggagatcactcggggccgctgtgcggcgata 1476
||||||||||||||||||| || ||||||||||| || |||||||||||||||||
Sbjct: 1432 gctcccgacgacatcgaggcgaccatccaggagataacctccggccgctgtgcggcgatc 1491
Query: 1477 gcggt 1481
|||||
Sbjct: 1492 gcggt 1496
>lcl|NC_000962.2_cdsid_NP_216037.1 [gene=fadD25] [protein=acyl-CoA
synthetase] [protein_id=NP_216037.1]
[location=1712302..1714053]
Length = 1752
Score = 71.9 bits (36), Expect = 2e-12
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 1384 aaggatctgttgattgtttacggccgcaatcattctcccgacgacatcgaggcaacgatc 1443
||||| || ||||| || ||||| ||||| || ||||||||||| |||||||| |||||
Sbjct: 1396 aaggacctcttgatcgtgtacgggcgcaaccactctcccgacgatatcgaggcgacgatt 1455
Query: 1444 caggagatcactcggggccgctgtgcggcgat 1475
||| ||||| || ||||||||||||||||||
Sbjct: 1456 cagacgatcagtccgggccgctgtgcggcgat 1487
Score = 61.9 bits (31), Expect = 2e-09
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 1192 ggaacaatcggtgagatctgggtacacggcgacaatgtcgccggcggctattgggaaaag 1251
||||| ||||||||||| ||||| ||||||||||| |||||| |||||||||| | ||
Sbjct: 1204 ggaacgatcggtgagatttgggtgcacggcgacaacgtcgccatcggctattggcagaaa 1263
Query: 1252 cctgacgagactgaacgcacctt 1274
|| || | ||| |||||||||||
Sbjct: 1264 cccgaggcgaccgaacgcacctt 1286
>lcl|NC_000962.2_cdsid_NP_217446.2 [gene=fadD26] [protein=acyl-CoA
synthetase] [protein_id=NP_217446.2]
[location=3243697..3245448]
Length = 1752
Score = 69.9 bits (35), Expect = 6e-12
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 1420 cccgacgacatcgaggcaacgatccaggagatcac 1454
|||||||||||||||||||||||||||||||||||
Sbjct: 1426 cccgacgacatcgaggcaacgatccaggagatcac 1460
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00232 136054 134831 len=1224
(1224 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218344.1 [gene=Rv3827c] [protein=transp... 2426 0.0
lcl|NC_000962.2_cdsid_NP_217307.1 [gene=Rv2791c] [protein=transp... 846 0.0
lcl|NC_000962.2_cdsid_NP_217494.1 [gene=Rv2978c] [protein=transp... 375 e-104
lcl|NC_000962.2_cdsid_NP_215120.1 [gene=Rv0606] [protein=hypothe... 317 1e-86
lcl|NC_000962.2_cdsid_NP_217401.1 [gene=Rv2885c] [protein=transp... 272 6e-73
lcl|NC_000962.2_cdsid_NP_215344.1 [gene=Rv0829] [protein=hypothe... 131 1e-30
>lcl|NC_000962.2_cdsid_NP_218344.1 [gene=Rv3827c]
[protein=transposase] [protein_id=NP_218344.1]
[location=complement(4301563..4302789)]
Length = 1227
Score = 2426 bits (1224), Expect = 0.0
Identities = 1224/1224 (100%)
Strand = Plus / Plus
Query: 1 atggccagattcgaggtgccagaaggctggtgtgtgcaggcgttccggttcacgctggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 atggccagattcgaggtgccagaaggctggtgtgtgcaggcgttccggttcacgctggac 63
Query: 61 ccaaccgaggaccaggcccgcgcgctggcgcggcatttcggcgctcgccgcaaggcctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 ccaaccgaggaccaggcccgcgcgctggcgcggcatttcggcgctcgccgcaaggcctac 123
Query: 121 aactgggcggtcgctactttgaaagccgatatcgaggcgtggcgcgttactggtatcggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 aactgggcggtcgctactttgaaagccgatatcgaggcgtggcgcgttactggtatcggg 183
Query: 181 actgtcaagccgtcgctgcgggtgcttcgtaaacggtggaacaccgtcaaggacgaggtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 actgtcaagccgtcgctgcgggtgcttcgtaaacggtggaacaccgtcaaggacgaggtg 243
Query: 241 tgtgtcaacgccgagaccggggcggtgtggtggccggagtgctcgaaagaggcttacgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tgtgtcaacgccgagaccggggcggtgtggtggccggagtgctcgaaagaggcttacgcc 303
Query: 301 gacggcattggcggcgctgtcgatgcgtactggaactggcagaactcccgatccggtaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gacggcattggcggcgctgtcgatgcgtactggaactggcagaactcccgatccggtaaa 363
Query: 361 cgtgagggcaagacaatgggcttcccccggttcaagaagaaaggccgcgatcaggaccgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 cgtgagggcaagacaatgggcttcccccggttcaagaagaaaggccgcgatcaggaccgc 423
Query: 421 gtgacattcacgaccggagcgatgcgcgtcgaacctgatcgccgtcatctcacacttccg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gtgacattcacgaccggagcgatgcgcgtcgaacctgatcgccgtcatctcacacttccg 483
Query: 481 gtcgtcgggaccgtccgtacgcacgagaacacacgccggattgaacggctcatcgccaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gtcgtcgggaccgtccgtacgcacgagaacacacgccggattgaacggctcatcgccaca 543
Query: 541 ggccgggcgcgggtgctggcaatctcggtgcgccgtaacggcacccggctcgacgccagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 ggccgggcgcgggtgctggcaatctcggtgcgccgtaacggcacccggctcgacgccagt 603
Query: 601 gtgcgggtcctcgtgcaacgcccgcagcagcccaacgtggcacagcccggttcacgggtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 gtgcgggtcctcgtgcaacgcccgcagcagcccaacgtggcacagcccggttcacgggtt 663
Query: 661 ggcgttgacgtcggggtgcgccggctggccacggtcgccaacgaggcgggcgcagtgctc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 ggcgttgacgtcggggtgcgccggctggccacggtcgccaacgaggcgggcgcagtgctc 723
Query: 721 gaagaagtgcccaatccacggccactcgacacggcactcaaagagctacggtacgccagc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 gaagaagtgcccaatccacggccactcgacacggcactcaaagagctacggtacgccagc 783
Query: 781 cgtgcgcggtcgcggtgcacgaaaggctcacggcgctaccgcgagcgcaccaccgagatt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 cgtgcgcggtcgcggtgcacgaaaggctcacggcgctaccgcgagcgcaccaccgagatt 843
Query: 841 tcccggctgcatcgccgggtcaacgatgtccgcactcatcacctgcatgtcctgacaaca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 tcccggctgcatcgccgggtcaacgatgtccgcactcatcacctgcatgtcctgacaaca 903
Query: 901 cgattggctcaaacccacggccacatcgttgttgaaggtttggacgctgcggggatgctg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 cgattggctcaaacccacggccacatcgttgttgaaggtttggacgctgcggggatgctg 963
Query: 961 cggcaaaaggggcttcccggcgcccgcgcccgccggcgcggactgtcggactcggccctg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964 cggcaaaaggggcttcccggcgcccgcgcccgccggcgcggactgtcggactcggccctg 1023
Query: 1021 ggcactccgcgccggcacttgtcctacaagacgggctggtacgggtcggcgctggtggtc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 ggcactccgcgccggcacttgtcctacaagacgggctggtacgggtcggcgctggtggtc 1083
Query: 1081 gccgaccgctggttcccgtcgttaagcgtggagccgaccgtaagaccgggccttgcccgg 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1084 gccgaccgctggttcccgtcgttaagcgtggagccgaccgtaagaccgggccttgcccgg 1143
Query: 1141 ctggtggctgtgaagcgcggaagggaggcagccgcatggctgccgaacaaccccgagacg 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1144 ctggtggctgtgaagcgcggaagggaggcagccgcatggctgccgaacaaccccgagacg 1203
Query: 1201 gggtgcaagtcgcgtgaccactaa 1224
||||||||||||||||||||||||
Sbjct: 1204 gggtgcaagtcgcgtgaccactaa 1227
>lcl|NC_000962.2_cdsid_NP_217307.1 [gene=Rv2791c]
[protein=transposase] [protein_id=NP_217307.1]
[location=complement(3100202..3101581)]
Length = 1380
Score = 846 bits (427), Expect = 0.0
Identities = 909/1067 (85%), Gaps = 2/1067 (0%)
Strand = Plus / Plus
Query: 37 caggcgttccggttcacgctggacccaaccgaggaccaggcccgcgcgctggcgcggcat 96
||||| |||||||||||||| || || |||| || |||||||||||| |||| ||||||
Sbjct: 37 caggctttccggttcacgctcgatccgaccgccgagcaggcccgcgcgttggcacggcat 96
Query: 97 ttcggcgctcgccgcaaggcctacaactgggcggtcgctactttgaaagccgatatcgag 156
||||| || ||||||||||||||||||||| | ||||| || ||||||||||||||||
Sbjct: 97 ttcggtgcccgccgcaaggcctacaactggaccgtcgccaccctgaaagccgatatcgac 156
Query: 157 gcgtggcgcgttactggtatcgggactgtcaagccgtcgctgcgggtgcttcgtaaacgg 216
|| |||| | || || ||| ||| | |||||||||||||||||| | || || ||
Sbjct: 157 gcctggcaggcgaccgggatccagacggcaaagccgtcgctgcgggtgttgcggaagcgc 216
Query: 217 tggaacaccgtcaaggacgaggtgtgtgtcaacgccgagaccggggcggtgtggtggccg 276
||||||||||||||| |||| ||||| |||||| ||||||||| | ||||||||||||
Sbjct: 217 tggaacaccgtcaagaacgacgtgtgcgtcaacatcgagaccggtgttgtgtggtggccg 276
Query: 277 gagtgctcgaaagaggcttacgccgacggcattggcggcgctgtcgatgcgtactggaac 336
||||||||||| ||||| ||||||||||| |||| |||||| ||||| ||||||||||||
Sbjct: 277 gagtgctcgaaggaggcctacgccgacggtattgacggcgcggtcgacgcgtactggaac 336
Query: 337 tggcagaactcccgatccggtaaacgtgagggcaagacaatgggcttcccccggttcaag 396
||||||||||| ||||| || |||||||| ||||| | |||||||| |||||||| |||
Sbjct: 337 tggcagaactcgcgatcaggcaaacgtgatggcaaaaggatgggctttccccggtttaag 396
Query: 397 aagaaaggccgcgatcaggaccgcgtgacattcacgaccggagcgatgcgcgtcgaacct 456
||||| || ||||| | ||||| ||||| |||||||||||||||||||||||||| ||
Sbjct: 397 aagaagggacgcgacccagaccgggtgacgttcacgaccggagcgatgcgcgtcgagccc 456
Query: 457 gatcgccgtcatctcacacttccggtcgtcgggaccgtccgtacgcacgagaacacacgc 516
|| || || || ||||| || |||||| ||||||||||||| || ||||||||||| |||
Sbjct: 457 gaccggcgccacctcacgctgccggtcatcgggaccgtccgcacccacgagaacacgcgc 516
Query: 517 cggattgaacggctcatcgccacaggccgggcgcgggtgctggcaatctcggtgcgccgt 576
||| |||| ||||||||||||| ||||||| |||||||||| || ||| |||||||||||
Sbjct: 517 cgggttgagcggctcatcgccaaaggccggtcgcgggtgctcgcgatcacggtgcgccgt 576
Query: 577 aacggcacccggctcgacgccagtgtgcgggtcctcgtgcaacgcccgcagcagcccaac 636
||||| |||||| |||| || |||||||||||||||||||| ||||||||||| || ||
Sbjct: 577 aacgggacccggatcgatgcgagtgtgcgggtcctcgtgcagcgcccgcagcaaccgaag 636
Query: 637 gtggcacagcccggttcacgggttggcgttgacgtcggggtgcgccggctggccacggtc 696
||| | | |||||||||||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 637 gtgaccgaccccggttcacgggtcggcgttgatgtcggggtgcgccgcctggccacggtc 696
Query: 697 gccaacgaggcgggcgcagtgctcgaagaagtgcccaatccacggccactcgacacggca 756
|||| || | ||||| ||||||||| |||||| |||||||||||||||||| |||||
Sbjct: 697 gccaccgccgacggcgcggtgctcgaacgagtgccgaatccacggccactcgacgcggca 756
Query: 757 ctcaaagagctacggtacgccagccgtgcgcggtcgcggtgcacgaaaggctcacggcgc 816
||||| ||||||||| | | | |||| || |||||||| ||||||||||||||||| |||
Sbjct: 757 ctcaacgagctacggcatgtctgccgggcacggtcgcgctgcacgaaaggctcacgtcgc 816
Query: 817 taccgcgagcgcaccaccgagatttcccggctgcatcgccgggtcaacgatgtccgcact 876
||||| |||||||||||||| || ||||||||||| ||||||||||||||||| |||||
Sbjct: 817 taccgtgagcgcaccaccgaaatatcccggctgcaccgccgggtcaacgatgttcgcacc 876
Query: 877 catcacctgca-tgtcctgacaacacgattggctcaaacccacggccacatcgttgttga 935
|| |||||||| ||| |||||||| | |||||| | |||||||||| ||||||||| ||
Sbjct: 877 caccacctgcactgt-ctgacaacgcatttggctaagacccacggccgcatcgttgtcga 935
Query: 936 aggtttggacgctgcggggatgctgcggcaaaaggggcttcccggcgcccgcgcccgccg 995
||| ||||||| || ||||||||||||||| |||| || | || |||||||| |||||
Sbjct: 936 aggcctggacgcggcagggatgctgcggcaacagggcctctcgggtgcccgcgctcgccg 995
Query: 996 gcgcggactgtcggactcggccctgggcactccgcgccggcacttgtcctacaagacggg 1055
||||||||| || ||| ||||||||||||| |||||||| ||| ||||||||||||| ||
Sbjct: 996 gcgcggactctccgacgcggccctgggcaccccgcgccgccacctgtcctacaagacagg 1055
Query: 1056 ctggtacgggtcggcgctggtggtcgccgaccgctggttcccgtcgt 1102
|||||||||||| || |||||||| |||||||||||||| ||||
Sbjct: 1056 ctggtacgggtcacaactagtggtcgctgaccgctggttcccatcgt 1102
Score = 178 bits (90), Expect = 7e-45
Identities = 108/114 (94%)
Strand = Plus / Plus
Query: 1104 aagcgtggagccgaccgtaagaccgggccttgcccggctggtggctgtgaagcgcggaag 1163
|||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||
Sbjct: 1267 aagcgtggagccgaccgtaagacccggcctggccgggctggtggccgtgaagcgcggaag 1326
Query: 1164 ggaggcagccgcatggctgccgaacaaccccgagacggggtgcaagtcgcgtga 1217
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1327 ggaagcagccgcaaggctgccgaacaaccccgagacggggtgcaagtcgcgtga 1380
>lcl|NC_000962.2_cdsid_NP_217494.1 [gene=Rv2978c]
[protein=transposase] [protein_id=NP_217494.1]
[location=complement(3333785..3335164)]
Length = 1380
Score = 375 bits (189), Expect = e-104
Identities = 282/313 (90%)
Strand = Plus / Plus
Query: 790 tcgcggtgcacgaaaggctcacggcgctaccgcgagcgcaccaccgagatttcccggctg 849
||||| ||||||||||| |||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 790 tcgcgttgcacgaaaggttcacggcgctaccgtgagcgcaccactcagatttcccggttg 849
Query: 850 catcgccgggtcaacgatgtccgcactcatcacctgcatgtcctgacaacacgattggct 909
|||||||||||||||||||||||||| ||||||||||| |||||||| ||||| ||||||
Sbjct: 850 catcgccgggtcaacgatgtccgcacccatcacctgcacgtcctgacgacacggttggct 909
Query: 910 caaacccacggccacatcgttgttgaaggtttggacgctgcggggatgctgcggcaaaag 969
||||||||||||| ||| ||||| ||||| |||||||| | | |||| ||||||||||
Sbjct: 910 caaacccacggccgcattgttgtcgaaggcttggacgcgacagagatgttgcggcaaaaa 969
Query: 970 gggcttcccggcgcccgcgcccgccggcgcggactgtcggactcggccctgggcactccg 1029
||| | || || |||||||| || ||||||||||||||||| |||||||||||||||||
Sbjct: 970 gggttgccgggtgcccgcgctcgtcggcgcggactgtcggatgcggccctgggcactccg 1029
Query: 1030 cgccggcacttgtcctacaagacgggctggtacgggtcggcgctggtggtcgccgaccgc 1089
|| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 1030 cgtcggcacttgtcctacaagacagtctggtacgggtcggcgctggtggtcgccgaccgc 1089
Query: 1090 tggttcccgtcgt 1102
|||||||||||||
Sbjct: 1090 tggttcccgtcgt 1102
Score = 186 bits (94), Expect = 3e-47
Identities = 109/114 (95%)
Strand = Plus / Plus
Query: 1104 aagcgtggagccgaccgtaagaccgggccttgcccggctggtggctgtgaagcgcggaag 1163
|||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 1267 aagcgtggagccgaccgtaagaccgggcctcgcccggcaggtggctgtgaagcgcggaag 1326
Query: 1164 ggaggcagccgcatggctgccgaacaaccccgagacggggtgcaagtcgcgtga 1217
||| |||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1327 ggaagcagccccaaggctgccgaacaaccccgagacggggtgcaagtcgcgtga 1380
Score = 184 bits (93), Expect = 1e-46
Identities = 249/301 (82%)
Strand = Plus / Plus
Query: 400 aaaggccgcgatcaggaccgcgtgacattcacgaccggagcgatgcgcgtcgaacctgat 459
||||||||||| ||||| || ||| | |||||||||||||||||||| || ||||| ||
Sbjct: 400 aaaggccgcgaccaggatcgagtgtcgttcacgaccggagcgatgcgtgtggaacccgac 459
Query: 460 cgccgtcatctcacacttccggtcgtcgggaccgtccgtacgcacgagaacacacgccgg 519
|||||||| ||||| || |||||| ||||||||||||| |||||||||||||| |||||
Sbjct: 460 cgccgtcacctcaccctgccggtcatcgggaccgtccgcacgcacgagaacacccgccgt 519
Query: 520 attgaacggctcatcgccacaggccgggcgcgggtgctggcaatctcggtgcgccgtaac 579
|| ||||| || ||| | || |||||||| || |||| |||||||||||||| |||
Sbjct: 520 atcgaacgcctgatcaaggccggtcgggcgcgagtattggcgatctcggtgcgccgcaac 579
Query: 580 ggcacccggctcgacgccagtgtgcgggtcctcgtgcaacgcccgcagcagcccaacgtg 639
||||| || || || |||||||||||||| || || || || ||||||||||| || |||
Sbjct: 580 ggcactcgtctggatgccagtgtgcgggtgcttgtccagcgtccgcagcagccgaaggtg 639
Query: 640 gcacagcccggttcacgggttggcgttgacgtcggggtgcgccggctggccacggtcgcc 699
| || |||||||| |||||||| || || |||||||| || || ||||| |||||||||
Sbjct: 640 gtgcaccccggttcgcgggttggtgtcgatgtcggggtccggcgcctggcgacggtcgcc 699
Query: 700 a 700
|
Sbjct: 700 a 700
Score = 137 bits (69), Expect = 2e-32
Identities = 138/161 (85%)
Strand = Plus / Plus
Query: 190 ccgtcgctgcgggtgcttcgtaaacggtggaacaccgtcaaggacgaggtgtgtgtcaac 249
||||||||||| ||||| || ||||| |||||||||||||||||||| ||||| ||||||
Sbjct: 190 ccgtcgctgcgcgtgctgcgcaaacgctggaacaccgtcaaggacgacgtgtgcgtcaac 249
Query: 250 gccgagaccggggcggtgtggtggccggagtgctcgaaagaggcttacgccgacggcatt 309
|||||||||| | | ||||||||| || ||||| |||||||| |||||||| |||||
Sbjct: 250 accgagaccggtgtcgcgtggtggcctgaatgctcaaaagaggcctacgccgatggcatc 309
Query: 310 ggcggcgctgtcgatgcgtactggaactggcagaactcccg 350
| || || ||||| ||||||||||||||||||| ||||||
Sbjct: 310 gcgggtgcggtcgaggcgtactggaactggcagacctcccg 350
Score = 111 bits (56), Expect = 1e-24
Identities = 107/124 (86%)
Strand = Plus / Plus
Query: 40 gcgttccggttcacgctggacccaaccgaggaccaggcccgcgcgctggcgcggcatttc 99
||||| ||||||||||||||||| ||||||||||||||| |||||||| |||||||||
Sbjct: 40 gcgtttcggttcacgctggacccgaccgaggaccaggccaaggcgctggcacggcatttc 99
Query: 100 ggcgctcgccgcaaggcctacaactgggcggtcgctactttgaaagccgatatcgaggcg 159
|| ||||| |||||||| ||||||||| | || || || |||||||||| ||| |||||
Sbjct: 100 ggtgctcgtcgcaaggcatacaactggaccgtggccaccctgaaagccgacatccaggcg 159
Query: 160 tggc 163
||||
Sbjct: 160 tggc 163
>lcl|NC_000962.2_cdsid_NP_215120.1 [gene=Rv0606]
[protein=hypothetical protein] [protein_id=NP_215120.1]
[location=702016..702759]
Length = 744
Score = 317 bits (160), Expect = 1e-86
Identities = 502/616 (81%)
Strand = Plus / Plus
Query: 25 ggctggtgtgtgcaggcgttccggttcacgctggacccaaccgaggaccaggcccgcgcg 84
|||||||||||||| |||||||||||||| || || || |||| || ||||| | ||||
Sbjct: 25 ggctggtgtgtgcaagcgttccggttcacactcgatccgaccgccgagcaggcacacgcg 84
Query: 85 ctggcgcggcatttcggcgctcgccgcaaggcctacaactgggcggtcgctactttgaaa 144
||||||||||||||||||| ||||||||||||||||||||| | ||||| |||||
Sbjct: 85 ttggcgcggcatttcggcgcccgccgcaaggcctacaactggaccgtcgcgcagctgaaa 144
Query: 145 gccgatatcgaggcgtggcgcgttactggtatcgggactgtcaagccgtcgctgcgggtg 204
||||||||| | |||||||||| || || | ||| | ||||||||||| |||||
Sbjct: 145 gccgatatccaagcgtggcgcgcgaccggcgcccagacggcgaagccgtcgcttcgggta 204
Query: 205 cttcgtaaacggtggaacaccgtcaaggacgaggtgtgtgtcaacgccgagaccggggcg 264
|| || ||||| |||||||| || || |||||||||||||||||||||||||| || |
Sbjct: 205 ctgcggaaacgctggaacacggtgaaagacgaggtgtgtgtcaacgccgagactggcacc 264
Query: 265 gtgtggtggccggagtgctcgaaagaggcttacgccgacggcattggcggcgctgtcgat 324
|||||||||||||| |||||||||||||| ||||||||||| || | ||||| |||||
Sbjct: 265 gtgtggtggccggaatgctcgaaagaggcctacgccgacgggatcgcgggcgcggtcgac 324
Query: 325 gcgtactggaactggcagaactcccgatccggtaaacgtgagggcaagacaatgggcttc 384
|||||||||||||||||| | || | || || || || ||||||| ||||||||||
Sbjct: 325 gcgtactggaactggcagcagaggcgtgctggcaagcgcgacggcaagagaatgggcttc 384
Query: 385 ccccggttcaagaagaaaggccgcgatcaggaccgcgtgacattcacgaccggagcgatg 444
|| || ||||||||||| |||||||| || |||||| | ||||| || || ||||||
Sbjct: 385 cctcgattcaagaagaagggccgcgacgccgatcgcgtgtcgttcaccacgggtgcgatg 444
Query: 445 cgcgtcgaacctgatcgccgtcatctcacacttccggtcgtcgggaccgtccgtacgcac 504
||||| || || || || | || ||||| | ||||| |||| ||| ||||||||
Sbjct: 445 cgcgttgagcccgaccgtagacacctcactttgccggtgatcggctgcgtgcgtacgcat 504
Query: 505 gagaacacacgccggattgaacggctcatcgccacaggccgggcgcgggtgctggcaatc 564
|||||||| ||||| || || || |||||||||| || |||||||||||||||||| |||
Sbjct: 505 gagaacacccgccgcatcgagcgcctcatcgccaaagaccgggcgcgggtgctggcgatc 564
Query: 565 tcggtgcgccgtaacggcacccggctcgacgccagtgtgcgggtcctcgtgcaacgcccg 624
|||||||||| |||||||||||||| || || ||||||||||| || ||||| |||||
Sbjct: 565 acggtgcgccgcaacggcacccggctggatgcgagtgtgcgggtactggtgcagcgcccc 624
Query: 625 cagcagcccaacgtgg 640
||||| ||||||||||
Sbjct: 625 cagcaacccaacgtgg 640
>lcl|NC_000962.2_cdsid_NP_217401.1 [gene=Rv2885c]
[protein=transposase] [protein_id=NP_217401.1]
[location=complement(3194166..3195548)]
Length = 1383
Score = 272 bits (137), Expect = 6e-73
Identities = 362/437 (82%)
Strand = Plus / Plus
Query: 187 aagccgtcgctgcgggtgcttcgtaaacggtggaacaccgtcaaggacgaggtgtgtgtc 246
|||||||||||||||||| | || |||||||||||||| ||||| ||| |||||||||||
Sbjct: 190 aagccgtcgctgcgggtgttgcgcaaacggtggaacacggtcaaagaccaggtgtgtgtc 249
Query: 247 aacgccgagaccggggcggtgtggtggccggagtgctcgaaagaggcttacgccgacggc 306
||||| |||||||| ||||||||||||||| |||||||||||||| || ||||| |||
Sbjct: 250 aacgcgcagaccgggcaggtgtggtggccggaatgctcgaaagaggcctatgccgatggc 309
Query: 307 attggcggcgctgtcgatgcgtactggaactggcagaactcccgatccggtaaacgtgag 366
|| | ||||| ||||||||||| ||||||||||||| || ||| |||| ||||| |
Sbjct: 310 atcgcgggcgcggtcgatgcgtattggaactggcagagctgccgtgccgggaaacgggct 369
Query: 367 ggcaagacaatgggcttcccccggttcaagaagaaaggccgcgatcaggaccgcgtgaca 426
||||| ||| | ||| | |||||||| |||||||| || ||||| || ||||||
Sbjct: 370 ggcaaaacagtaggcgttccccggtttaagaagaagggacgcgacgccgatcgcgtgtgc 429
Query: 427 ttcacgaccggagcgatgcgcgtcgaacctgatcgccgtcatctcacacttccggtcgtc 486
||||||||||| |||||||| || || || || ||||| || ||||| | ||||| ||
Sbjct: 430 ttcacgaccggtgcgatgcgtgtggagcccgaccgccgccacctcaccttgccggtgatc 489
Query: 487 gggaccgtccgtacgcacgagaacacacgccggattgaacggctcatcgccacaggccgg 546
|| ||| |||||||| |||||||||| |||||| |||| ||||||||||||| ||| |||
Sbjct: 490 ggcaccatccgtacgtacgagaacacccgccgggttgagcggctcatcgccaaaggtcgg 549
Query: 547 gcgcgggtgctggcaatctcggtgcgccgtaacggcacccggctcgacgccagtgtgcgg 606
|||||||||||||| ||| | |||||||| ||||||||||| || || || || ||||||
Sbjct: 550 gcgcgggtgctggcgatcaccgtgcgccgcaacggcacccgcctggatgcgagcgtgcgg 609
Query: 607 gtcctcgtgcaacgccc 623
|| ||||| ||||||||
Sbjct: 610 gtgctcgtccaacgccc 626
Score = 252 bits (127), Expect = 6e-67
Identities = 262/307 (85%)
Strand = Plus / Plus
Query: 796 tgcacgaaaggctcacggcgctaccgcgagcgcaccaccgagatttcccggctgcatcgc 855
||||||||||||||||| |||||| | |||||||||||||| | ||||||||||| ||
Sbjct: 799 tgcacgaaaggctcacgccgctactgtgagcgcaccaccgaactgtcccggctgcaccgt 858
Query: 856 cgggtcaacgatgtccgcactcatcacctgcatgtcctgacaacacgattggctcaaacc 915
||||||||||||||||| || || |||||||| || ||||||||||||||||| |||||
Sbjct: 859 cgggtcaacgatgtccgtacccaccacctgcacgtgctgacaacacgattggccaaaacc 918
Query: 916 cacggccacatcgttgttgaaggtttggacgctgcggggatgctgcggcaaaaggggctt 975
||||||| |||||||| |||||| |||| || ||||| ||||||||||||||||| ||
Sbjct: 919 cacggccgtatcgttgtcgaaggtctggatgcggcgggaatgctgcggcaaaagggactg 978
Query: 976 cccggcgcccgcgcccgccggcgcggactgtcggactcggccctgggcactccgcgccgg 1035
|| || || |||||| | ||||||| |||||| || | ||||||| || ||||||||
Sbjct: 979 ccgggggcgcgcgccagacggcgcgcactgtctgatgcagccctggcaaccccgcgccgt 1038
Query: 1036 cacttgtcctacaagacgggctggtacgggtcggcgctggtggtcgccgaccgctggttc 1095
||| ||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 1039 cacctgtcctacaagacaggctggtacggatcgagtctggtggtcgccgaccgctggttc 1098
Query: 1096 ccgtcgt 1102
|| ||||
Sbjct: 1099 ccatcgt 1105
Score = 119 bits (60), Expect = 5e-27
Identities = 96/108 (88%)
Strand = Plus / Plus
Query: 1104 aagcgtggagccgaccgtaagaccgggccttgcccggctggtggctgtgaagcgcggaag 1163
|||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||
Sbjct: 1270 aagcgtggagccgaccgtaagaccgggcctggcccggcgggtggccgtgaagcgcggaag 1329
Query: 1164 ggaggcagccgcatggctgccgaacaaccccgagacggggtgcaagtc 1211
| | | ||| | ||| | ||||||||||||||||||||||||||||
Sbjct: 1330 gcaaccggccacccggccggcgaacaaccccgagacggggtgcaagtc 1377
Score = 58.0 bits (29), Expect = 2e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 14 aggtgccagaaggctggtgtgtgcaggcgttccggttcacgctggaccc 62
||||||| || || ||||||||||||||||| |||||||||||| ||||
Sbjct: 17 aggtgcctgaggggtggtgtgtgcaggcgtttcggttcacgctgaaccc 65
>lcl|NC_000962.2_cdsid_NP_215344.1 [gene=Rv0829] [protein=hypothetical
protein] [protein_id=NP_215344.1]
[location=921575..921865]
Length = 291
Score = 131 bits (66), Expect = 1e-30
Identities = 102/114 (89%)
Strand = Plus / Plus
Query: 1104 aagcgtggagccgaccgtaagaccgggccttgcccggctggtggctgtgaagcgcggaag 1163
|||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||
Sbjct: 178 aagcgtggagccgaccgtaagaccgggcctggcccggcgggtggccgtgaagcgcggaag 237
Query: 1164 ggaggcagccgcatggctgccgaacaaccccgagacggggtgcaagtcgcgtga 1217
| | | ||| | ||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 238 gcaaccggccacccggctggcgaacaaccccgagacggggtgctagtcgcgtga 291
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00233 138276 136666 len=1611
(1611 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218346.1 [gene=Rv3829c] [protein=dehydr... 3194 0.0
>lcl|NC_000962.2_cdsid_NP_218346.1 [gene=Rv3829c]
[protein=dehydrogenase] [protein_id=NP_218346.1]
[location=complement(4303398..4305008)]
Length = 1611
Score = 3194 bits (1611), Expect = 0.0
Identities = 1611/1611 (100%)
Strand = Plus / Plus
Query: 1 atgactggttatgacgcgatagttatcggcgccgggcacaacgggctgaccgcggcagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgactggttatgacgcgatagttatcggcgccgggcacaacgggctgaccgcggcagtg 60
Query: 61 ctgctgcagcgagccggactgcggaccgcgtgtctggacgctaagcgctacgccggcggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgctgcagcgagccggactgcggaccgcgtgtctggacgctaagcgctacgccggcggg 120
Query: 121 atggcctccacggtggagctgttcgacgggtaccggttcgagatcgccggatcggtgcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atggcctccacggtggagctgttcgacgggtaccggttcgagatcgccggatcggtgcag 180
Query: 181 ttcccgacctcctcggcggtcagcagcgagttaggcctggacagcttgccgacggtcgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttcccgacctcctcggcggtcagcagcgagttaggcctggacagcttgccgacggtcgat 240
Query: 241 ctggaggtgatgtcggtagcgttgcgcggtgtcggggacgatccggtggtccaattcacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctggaggtgatgtcggtagcgttgcgcggtgtcggggacgatccggtggtccaattcacc 300
Query: 301 gacccgacgaagatgcttacccacctccatcgggtgcacggggcagacgccgtcaccggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gacccgacgaagatgcttacccacctccatcgggtgcacggggcagacgccgtcaccggg 360
Query: 361 atggcgggcctgctggcgtggagccaggcgccgacccgggcgctggggcgtttcgaagcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atggcgggcctgctggcgtggagccaggcgccgacccgggcgctggggcgtttcgaagcc 420
Query: 421 ggaactctgcccaagagcttcgacgagatgtatgcctgtgccacaaatgaattcgaacgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggaactctgcccaagagcttcgacgagatgtatgcctgtgccacaaatgaattcgaacgg 480
Query: 481 tcagcgatcgatgacatgctgttcggatcggtcaccgacgtgttggaccgccatttcccg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcagcgatcgatgacatgctgttcggatcggtcaccgacgtgttggaccgccatttcccg 540
Query: 541 gaccgcgagaagcacggcgccctgcgcgggtcgatgaccgtgctggccgtgaacacgctc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaccgcgagaagcacggcgccctgcgcgggtcgatgaccgtgctggccgtgaacacgctc 600
Query: 601 tatcgcgggccggccacaccgggcagcgctgccgcgctcgccttcggattgggtgtcccg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tatcgcgggccggccacaccgggcagcgctgccgcgctcgccttcggattgggtgtcccg 660
Query: 661 gagggcgacttcgtgcggtggaagaaattgcgcggtggcatcggcgcgcttaccacccat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gagggcgacttcgtgcggtggaagaaattgcgcggtggcatcggcgcgcttaccacccat 720
Query: 721 ctgtcgcaattgctggaacgcaccggcggcgaggtccggttacgttccaaggtgaccgag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ctgtcgcaattgctggaacgcaccggcggcgaggtccggttacgttccaaggtgaccgag 780
Query: 781 atcgtggttgacaatagtcggtcgtcagcccgcgtgcggggcgtgcgcaccgcggcgggg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 atcgtggttgacaatagtcggtcgtcagcccgcgtgcggggcgtgcgcaccgcggcgggg 840
Query: 841 gacaccttgacctccccgatcgtggtctccgccatagcacccgacgtcaccatcaacgag 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gacaccttgacctccccgatcgtggtctccgccatagcacccgacgtcaccatcaacgag 900
Query: 901 ctgatcgatccggcagtgttgccgtcggaaatccgcgatcgctatttgcgcatcgaccac 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ctgatcgatccggcagtgttgccgtcggaaatccgcgatcgctatttgcgcatcgaccac 960
Query: 961 cgcggcagctatctgcagatgcattttgcgctcgcgcagccaccggccttcgcggcgccc 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 cgcggcagctatctgcagatgcattttgcgctcgcgcagccaccggccttcgcggcgccc 1020
Query: 1021 taccaggcactcaacgatccgagcatgcaggcatcgatgggcattttctgtacaccggag 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 taccaggcactcaacgatccgagcatgcaggcatcgatgggcattttctgtacaccggag 1080
Query: 1081 caggttcagcagcagtgggaggattgccggcgtgggatcgtcccggccgatccgaccgtg 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 caggttcagcagcagtgggaggattgccggcgtgggatcgtcccggccgatccgaccgtg 1140
Query: 1141 gtgttgcagatcccgtcgctgcatgatcccagcctggccccggcgggtaagcaggccgcg 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gtgttgcagatcccgtcgctgcatgatcccagcctggccccggcgggtaagcaggccgcg 1200
Query: 1201 tcggcgttcgcaatgtggttcccgatcgagggtggctcaaaatacggagggtacggccgg 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 tcggcgttcgcaatgtggttcccgatcgagggtggctcaaaatacggagggtacggccgg 1260
Query: 1261 gcaaaggtcgaaatggggcagaacgtgatcgacaagatcactaggttggcaccgaacttc 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 gcaaaggtcgaaatggggcagaacgtgatcgacaagatcactaggttggcaccgaacttc 1320
Query: 1321 aaaggcagcattctccggtacaccacctttacccccaaacacatgggtgtgatgttcggt 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 aaaggcagcattctccggtacaccacctttacccccaaacacatgggtgtgatgttcggt 1380
Query: 1381 gccccgggtggggactactgccatgccctgctgcactcggaccagatcggccccaacagg 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 gccccgggtggggactactgccatgccctgctgcactcggaccagatcggccccaacagg 1440
Query: 1441 cctggcccgaaaggctttatcggccagccgatcccgatagccgggttgtacctgggcagt 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 cctggcccgaaaggctttatcggccagccgatcccgatagccgggttgtacctgggcagt 1500
Query: 1501 gccggttgtcacggtgggccgggaatcacgttcatccctggatataacgccgcccgtcag 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 gccggttgtcacggtgggccgggaatcacgttcatccctggatataacgccgcccgtcag 1560
Query: 1561 gcgctggccgatcgtagggctgccaactgttgcgttttgagtggtcggtag 1611
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 gcgctggccgatcgtagggctgccaactgttgcgttttgagtggtcggtag 1611
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00235 139277 139507 len=231
(231 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218348.1 [gene=Rv3831] [protein=hypothe... 458 e-130
>lcl|NC_000962.2_cdsid_NP_218348.1 [gene=Rv3831]
[protein=hypothetical protein] [protein_id=NP_218348.1]
[location=4305757..4306239]
Length = 483
Score = 458 bits (231), Expect = e-130
Identities = 231/231 (100%)
Strand = Plus / Plus
Query: 1 atgttcaccaacccggcggccagttcggccggccaggactacaccattgccaacgtgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 atgttcaccaacccggcggccagttcggccggccaggactacaccattgccaacgtgatc 312
Query: 61 ctgctgccgctgttttccaccaccgacggctaccgacgtggtctgcggcggccctggctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ctgctgccgctgttttccaccaccgacggctaccgacgtggtctgcggcggccctggctg 372
Query: 121 tatttcgtgagcagcctgttcaccagctttgcattcgcgttcgcgttctacttcgccacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tatttcgtgagcagcctgttcaccagctttgcattcgcgttcgcgttctacttcgccacc 432
Query: 181 atcgaacgtcagcaccgacacgaacgttcccgtgcgacggtcggcgcctag 231
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 atcgaacgtcagcaccgacacgaacgttcccgtgcgacggtcggcgcctag 483
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00236 139637 139795 len=159
(159 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218349.1 [gene=Rv3832c] [protein=hypoth... 315 5e-87
>lcl|NC_000962.2_cdsid_NP_218349.1 [gene=Rv3832c]
[protein=hypothetical protein] [protein_id=NP_218349.1]
[location=complement(4306236..4306811)]
Length = 576
Score = 315 bits (159), Expect = 5e-87
Identities = 159/159 (100%)
Strand = Plus / Minus
Query: 1 atgtgtattaggcgaaacggcagcgacggcacaccgtcgctgccggcaaagacgccacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 atgtgtattaggcgaaacggcagcgacggcacaccgtcgctgccggcaaagacgccacct 384
Query: 61 ggttgcagcacccggtacgcctcagcgaatagctggtcctgcagttgggcgctggcaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ggttgcagcacccggtacgcctcagcgaatagctggtcctgcagttgggcgctggcaaca 324
Query: 121 tggtgcagcatcgtgaaacacaccacggacgtgaagtga 159
|||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tggtgcagcatcgtgaaacacaccacggacgtgaagtga 285
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00237 139792 140064 len=273
(273 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218349.1 [gene=Rv3832c] [protein=hypoth... 541 e-155
>lcl|NC_000962.2_cdsid_NP_218349.1 [gene=Rv3832c]
[protein=hypothetical protein] [protein_id=NP_218349.1]
[location=complement(4306236..4306811)]
Length = 576
Score = 541 bits (273), Expect = e-155
Identities = 273/273 (100%)
Strand = Plus / Minus
Query: 1 gtgatcatcgggcagcccggtctgggtgccatcgccgcggatgatgcgcgcccgctggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 gtgatcatcgggcagcccggtctgggtgccatcgccgcggatgatgcgcgcccgctggcc 229
Query: 61 gtagcggcggttcaggcgctcgaccatcgagttgtcgacttcaacggcggtgagcgaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 gtagcggcggttcaggcgctcgaccatcgagttgtcgacttcaacggcggtgagcgaggc 169
Query: 121 ggtcaggccaaggagcgcttgcagtgtcgccccataaccggggccgatctccagcgtccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 ggtcaggccaaggagcgcttgcagtgtcgccccataaccggggccgatctccagcgtccg 109
Query: 181 ggggccgagttcgacgtgctgcaacgcccagggcaggagctgattggccaccgctttttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 ggggccgagttcgacgtgctgcaacgcccagggcaggagctgattggccaccgctttttc 49
Query: 241 ccagcctgccgagctgcaatgacgccgatgtag 273
|||||||||||||||||||||||||||||||||
Sbjct: 48 ccagcctgccgagctgcaatgacgccgatgtag 16
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00238 140742 140984 len=243
(243 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218350.1 [gene=Rv3833] [protein=AraC fa... 367 e-102
lcl|NC_000962.2_cdsid_NP_218351.1 [gene=serS] [protein=seryl-tRN... 123 6e-29
lcl|NC_000962.2_cdsid_NP_216606.1 [gene=Rv2090] [protein=5'-3' e... 66 1e-11
>lcl|NC_000962.2_cdsid_NP_218350.1 [gene=Rv3833] [protein=AraC
family transcriptional regulator]
[protein_id=NP_218350.1] [location=4306867..4307658]
Length = 792
Score = 367 bits (185), Expect = e-102
Identities = 185/185 (100%)
Strand = Plus / Plus
Query: 1 atgcgctcgtgttgctcgccgagcgccacgacgtcacgtccgtggcgtccgaatgcggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 atgcgctcgtgttgctcgccgagcgccacgacgtcacgtccgtggcgtccgaatgcggtt 667
Query: 61 gggccacaccaagcgcgttcattgacacctaccgacaagccttcggacacactcccggcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 gggccacaccaagcgcgttcattgacacctaccgacaagccttcggacacactcccggcc 727
Query: 121 aagccgctaagccaatggcggcgacccgcctcacccggctccgccgcgctcgcgatcgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 aagccgctaagccaatggcggcgacccgcctcacccggctccgccgcgctcgcgatcgcc 787
Query: 181 gctaa 185
|||||
Sbjct: 788 gctaa 792
>lcl|NC_000962.2_cdsid_NP_218351.1 [gene=serS] [protein=seryl-tRNA
synthetase] [protein_id=NP_218351.1]
[location=complement(4307655..4308914)]
Length = 1260
Score = 123 bits (62), Expect = 6e-29
Identities = 62/62 (100%)
Strand = Plus / Minus
Query: 182 ctaagcgaccggctccagcacttcgacacccacgaacggaaccagtgcgtccgggactct 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1260 ctaagcgaccggctccagcacttcgacacccacgaacggaaccagtgcgtccgggactct 1201
Query: 242 aa 243
||
Sbjct: 1200 aa 1199
>lcl|NC_000962.2_cdsid_NP_216606.1 [gene=Rv2090] [protein=5'-3'
exonuclease] [protein_id=NP_216606.1]
[location=2347373..2348554]
Length = 1182
Score = 65.9 bits (33), Expect = 1e-11
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 140 ggcgacccgcctcacccggctccgccgcgctcgcgatcgcc 180
||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 25 ggcgacccgccgcacccggctccgccgcgcttgcgatcgcc 65
Score = 58.0 bits (29), Expect = 3e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 140 ggcgacccgcctcacccggctccgccgcgctcgcgatcgcc 180
|||||||||| ||||||||||||||||||| |||||||||
Sbjct: 82 ggcgacccgctgcacccggctccgccgcgcttgcgatcgcc 122
Score = 58.0 bits (29), Expect = 3e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 140 ggcgacccgcctcacccggctccgccgcgctcgcgatcgcc 180
|||||||||| ||||||||||||||||||| |||||||||
Sbjct: 139 ggcgacccgctgcacccggctccgccgcgcttgcgatcgcc 179
Score = 58.0 bits (29), Expect = 3e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 140 ggcgacccgcctcacccggctccgccgcgctcgcgatcgcc 180
|||||||||| ||||||||||||||||||| |||||||||
Sbjct: 196 ggcgacccgctgcacccggctccgccgcgcttgcgatcgcc 236
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00243 142306 143664 len=1359
(1359 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218352.1 [gene=Rv3835] [protein=hypothe... 2676 0.0
>lcl|NC_000962.2_cdsid_NP_218352.1 [gene=Rv3835] [protein=hypothetical
protein] [protein_id=NP_218352.1]
[location=4309047..4310396]
Length = 1350
Score = 2676 bits (1350), Expect = 0.0
Identities = 1350/1350 (100%)
Strand = Plus / Plus
Query: 10 atgttggacgcgcccgagcaggaccccgtcgatcccggcgacccggccagccccccgcac 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgttggacgcgcccgagcaggaccccgtcgatcccggcgacccggccagccccccgcac 60
Query: 70 ggggaggcggaacagccgctgcccgggcctcggtggccacgcgccctgcgcgcgtcggcg 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggggaggcggaacagccgctgcccgggcctcggtggccacgcgccctgcgcgcgtcggcg 120
Query: 130 acccggcgagcgctactcctcaccgctttgggtggcctgctgattgccgggctggtcacc 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acccggcgagcgctactcctcaccgctttgggtggcctgctgattgccgggctggtcacc 180
Query: 190 gcgattcccgccgtcggccgcgcgccggagcggctggccggctacatcgccagcaatccg 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcgattcccgccgtcggccgcgcgccggagcggctggccggctacatcgccagcaatccg 240
Query: 250 gtgcccagcactggcgccaagatcaacgcttcgttcaaccgcgtcgccagtggtgactgc 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtgcccagcactggcgccaagatcaacgcttcgttcaaccgcgtcgccagtggtgactgc 300
Query: 310 ttgatgtggccggacggcacgccggagtctgccgccatcgtcagctgtgccgacgagcac 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttgatgtggccggacggcacgccggagtctgccgccatcgtcagctgtgccgacgagcac 360
Query: 370 cggttcgaagtcgccgagtccattgacatgcggacattccccggcatggagtacgggcaa 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cggttcgaagtcgccgagtccattgacatgcggacattccccggcatggagtacgggcaa 420
Query: 430 aacgctgctcccccgtcgcccgcccgcattcagcagatcagcgaggagcagtgcgaagct 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aacgctgctcccccgtcgcccgcccgcattcagcagatcagcgaggagcagtgcgaagct 480
Query: 490 gctgtgcgccgctacctcggcacgaagttcgatcccaacagcaagttcaccatcagcatg 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gctgtgcgccgctacctcggcacgaagttcgatcccaacagcaagttcaccatcagcatg 540
Query: 550 ctgtggcccggcgaccgggcgtggcggcaggccggtgagcgccgcatgctctgtggcttg 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctgtggcccggcgaccgggcgtggcggcaggccggtgagcgccgcatgctctgtggcttg 600
Query: 610 cagtcgcccggtccgaacaaccagcagctcgccttcaagggcaaggtcgccgacatcgac 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cagtcgcccggtccgaacaaccagcagctcgccttcaagggcaaggtcgccgacatcgac 660
Query: 670 cagtccaaggtctggccggccggtacctgcctgggcatcgatgccaccaccaaccagccg 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cagtccaaggtctggccggccggtacctgcctgggcatcgatgccaccaccaaccagccg 720
Query: 730 atcgacgtgccggtggactgcgcggcaccgcacgcgatggaggtatccggcacggtcaac 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 atcgacgtgccggtggactgcgcggcaccgcacgcgatggaggtatccggcacggtcaac 780
Query: 790 ctggccgagaggtttcccgacgcgctgccgagcgaacccgagcaggacgggttcatcaag 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ctggccgagaggtttcccgacgcgctgccgagcgaacccgagcaggacgggttcatcaag 840
Query: 850 gacgcgtgcacccggatgacggacgcctacctcgcacccctcaagttgcgtaccaccacc 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gacgcgtgcacccggatgacggacgcctacctcgcacccctcaagttgcgtaccaccacc 900
Query: 910 ctgacgctgatctaccccacgctgacgctgcccagctggtcggcgggtagccgcgtggtc 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ctgacgctgatctaccccacgctgacgctgcccagctggtcggcgggtagccgcgtggtc 960
Query: 970 gcatgcagtatcggcgcgaccctgggcaacggggggtgggcaaccctggtgaacagcgct 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gcatgcagtatcggcgcgaccctgggcaacggggggtgggcaaccctggtgaacagcgct 1020
Query: 1030 aagggggcgctgctgatcaacggccagccgccggtacccccacccgacattcccgaggag 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 aagggggcgctgctgatcaacggccagccgccggtacccccacccgacattcccgaggag 1080
Query: 1090 cggctcaacctgccgccgattccgcttcagctgccaacgcctcggcccgcccccccggct 1149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 cggctcaacctgccgccgattccgcttcagctgccaacgcctcggcccgcccccccggct 1140
Query: 1150 cagcagctgccaagtaccccaccaggcactcagcacctccctgcccaacagccagtggtt 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 cagcagctgccaagtaccccaccaggcactcagcacctccctgcccaacagccagtggtt 1200
Query: 1210 acgcccacccggccacccgaatcgcatgcgccagcgtcggcagcaccggccgagacccag 1269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 acgcccacccggccacccgaatcgcatgcgccagcgtcggcagcaccggccgagacccag 1260
Query: 1270 ccaccgccaccagacgccggagcgccgccggcgacccaatcaccagaggccacaccgcct 1329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 ccaccgccaccagacgccggagcgccgccggcgacccaatcaccagaggccacaccgcct 1320
Query: 1330 ggccccgccgagcccgcaccggcaggctag 1359
||||||||||||||||||||||||||||||
Sbjct: 1321 ggccccgccgagcccgcaccggcaggctag 1350
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00244 143958 144071 len=114
(114 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218353.1 [gene=Rv3836] [protein=hypothe... 226 3e-60
>lcl|NC_000962.2_cdsid_NP_218353.1 [gene=Rv3836]
[protein=hypothetical protein] [protein_id=NP_218353.1]
[location=4310401..4310814]
Length = 414
Score = 226 bits (114), Expect = 3e-60
Identities = 114/114 (100%)
Strand = Plus / Plus
Query: 1 atgaggtcgcccatcacttcggcatcgacgacgagcgcttggaccaactgggctggcgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 atgaggtcgcccatcacttcggcatcgacgacgagcgcttggaccaactgggctggcgtg 349
Query: 61 acgaaccagcgcccgggcgcggcaacccggatttgtcggcacccgatgctatga 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 acgaaccagcgcccgggcgcggcaacccggatttgtcggcacccgatgctatga 403
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00248 147818 147991 len=174
(174 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218358.1 [gene=bfrB] [protein=bacteriof... 345 7e-96
>lcl|NC_000962.2_cdsid_NP_218358.1 [gene=bfrB]
[protein=bacterioferritin BfrB] [protein_id=NP_218358.1]
[location=4314178..4314723]
Length = 546
Score = 345 bits (174), Expect = 7e-96
Identities = 174/174 (100%)
Strand = Plus / Plus
Query: 1 atgcagtggttcttgcaggaacagatcgaagaggtggccttgatggcaaccctggtgcgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 atgcagtggttcttgcaggaacagatcgaagaggtggccttgatggcaaccctggtgcgg 432
Query: 61 gttgccgatcgggccggggccaacctgttcgagctagagaacttcgtcgcacgtgaagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gttgccgatcgggccggggccaacctgttcgagctagagaacttcgtcgcacgtgaagtg 492
Query: 121 gatgtggcgccggccgcatcaggcgccccgcacgctgccgggggccgcctctag 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gatgtggcgccggccgcatcaggcgccccgcacgctgccgggggccgcctctag 546
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00250 149001 148864 len=138
(138 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218360.1 [gene=Rv3843c] [protein=transm... 274 2e-74
>lcl|NC_000962.2_cdsid_NP_218360.1 [gene=Rv3843c]
[protein=transmembrane protein] [protein_id=NP_218360.1]
[location=complement(4315568..4316596)]
Length = 1029
Score = 274 bits (138), Expect = 2e-74
Identities = 138/138 (100%)
Strand = Plus / Plus
Query: 1 gtgtgcggcggccgcggtggccgctgctgcgcgggtcttcgaggggttcgagcaaaagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 gtgtgcggcggccgcggtggccgctgctgcgcgggtcttcgaggggttcgagcaaaagcc 923
Query: 61 ggtcgaacgcccagcgcatcgctgggtggtggtgaacacagacgggcgttccgcgccggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 ggtcgaacgcccagcgcatcgctgggtggtggtgaacacagacgggcgttccgcgccggc 983
Query: 121 atcttctgttgcggttga 138
||||||||||||||||||
Sbjct: 984 atcttctgttgcggttga 1001
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00251 149236 149018 len=219
(219 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218360.1 [gene=Rv3843c] [protein=transm... 434 e-122
>lcl|NC_000962.2_cdsid_NP_218360.1 [gene=Rv3843c]
[protein=transmembrane protein] [protein_id=NP_218360.1]
[location=complement(4315568..4316596)]
Length = 1029
Score = 434 bits (219), Expect = e-122
Identities = 219/219 (100%)
Strand = Plus / Plus
Query: 1 gtgagttatgggccggctgcctattgccgatggtcaatctgctgtgggctccgctgtacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gtgagttatgggccggctgcctattgccgatggtcaatctgctgtgggctccgctgtacg 688
Query: 61 tcatcgagttggcgctggtcgaggaccgctacacgcggctgcgcaggccgatcgtggtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 tcatcgagttggcgctggtcgaggaccgctacacgcggctgcgcaggccgatcgtggtgt 748
Query: 121 ggtggatcgtgtggatcgtcagcaacgcgatatcgatgttcgcgttcgccaccagctggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 ggtggatcgtgtggatcgtcagcaacgcgatatcgatgttcgcgttcgccaccagctggg 808
Query: 181 tcaccgacgctcagggcatcgccaacaacaccaccatga 219
|||||||||||||||||||||||||||||||||||||||
Sbjct: 809 tcaccgacgctcagggcatcgccaacaacaccaccatga 847
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00255 152545 152877 len=333
(333 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218362.1 [gene=Rv3845] [protein=hypothe... 652 0.0
lcl|NC_000962.2_cdsid_NP_217866.1 [gene=Rv3349c] [protein=transp... 137 6e-33
>lcl|NC_000962.2_cdsid_NP_218362.1 [gene=Rv3845]
[protein=hypothetical protein] [protein_id=NP_218362.1]
[location=4319281..4319640]
Length = 360
Score = 652 bits (329), Expect = 0.0
Identities = 329/329 (100%)
Strand = Plus / Plus
Query: 5 gtggaccgcgttcgccgggtcgttaccgaccgcgacagcggtgctggggcgttggcccga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggaccgcgttcgccgggtcgttaccgaccgcgacagcggtgctggggcgttggcccga 60
Query: 65 catccgcttgctggccggcgcaccgacccgcaactggcggcgttctaccaccggctgatg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catccgcttgctggccggcgcaccgacccgcaactggcggcgttctaccaccggctgatg 120
Query: 125 accacccagaggcattgccacacccaggccaccatcgccgtagcccgcaagctggccgaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 accacccagaggcattgccacacccaggccaccatcgccgtagcccgcaagctggccgaa 180
Query: 185 cgcacccgggtgacgatcaccaccggccgcccctaccagctgcgcgacaccaacggcgac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgcacccgggtgacgatcaccaccggccgcccctaccagctgcgcgacaccaacggcgac 240
Query: 245 cctgtcaccgcccgcggcgcgaaagaactgatcgacgcccactaccacgtcgacaccagg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cctgtcaccgcccgcggcgcgaaagaactgatcgacgcccactaccacgtcgacaccagg 300
Query: 305 acccacccacacaaccgcgcccacactga 333
|||||||||||||||||||||||||||||
Sbjct: 301 acccacccacacaaccgcgcccacactga 329
>lcl|NC_000962.2_cdsid_NP_217866.1 [gene=Rv3349c]
[protein=transposase] [protein_id=NP_217866.1]
[location=complement(3754293..3755033)]
Length = 741
Score = 137 bits (69), Expect = 6e-33
Identities = 69/69 (100%)
Strand = Plus / Minus
Query: 27 ttaccgaccgcgacagcggtgctggggcgttggcccgacatccgcttgctggccggcgca 86
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttaccgaccgcgacagcggtgctggggcgttggcccgacatccgcttgctggccggcgca 682
Query: 87 ccgacccgc 95
|||||||||
Sbjct: 681 ccgacccgc 673
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00259 153328 153197 len=132
(132 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00260 154327 154196 len=132
(132 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218363.1 [gene=sodA] [protein=superoxid... 262 6e-71
>lcl|NC_000962.2_cdsid_NP_218363.1 [gene=sodA] [protein=superoxide
dismutase [Fe] SODA] [protein_id=NP_218363.1]
[location=4320704..4321327]
Length = 624
Score = 262 bits (132), Expect = 6e-71
Identities = 132/132 (100%)
Strand = Plus / Minus
Query: 1 gtggtagcggccgcgtggaactgcgcacggaacttgtcgaacgaaccgaacgcgtcggcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gtggtagcggccgcgtggaactgcgcacggaacttgtcgaacgaaccgaacgcgtcggcg 297
Query: 61 atggctgcggcgagttcgccggtgggcttgtcaccaccgttaggcgacaggttcttccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 atggctgcggcgagttcgccggtgggcttgtcaccaccgttaggcgacaggttcttccac 237
Query: 121 cagatggtgtga 132
||||||||||||
Sbjct: 236 cagatggtgtga 225
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00263 154910 155062 len=153
(153 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218364.1 [gene=Rv3847] [protein=hypothe... 303 2e-83
>lcl|NC_000962.2_cdsid_NP_218364.1 [gene=Rv3847]
[protein=hypothetical protein] [protein_id=NP_218364.1]
[location=4321538..4322071]
Length = 534
Score = 303 bits (153), Expect = 2e-83
Identities = 153/153 (100%)
Strand = Plus / Plus
Query: 1 gtgggcccagctgctgatggtcgcagttcgggtcgcgtcgttgcccggcttgctctccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 gtgggcccagctgctgatggtcgcagttcgggtcgcgtcgttgcccggcttgctctccac 164
Query: 61 cacaacggtgtttggtgcccgcgaagagttgcccgacgaacccgagccggggaccgtcgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 cacaacggtgtttggtgcccgcgaagagttgcccgacgaacccgagccggggaccgtcgg 224
Query: 121 tctggtgctggccgagggcaccgtcttcggtga 153
|||||||||||||||||||||||||||||||||
Sbjct: 225 tctggtgctggccgagggcaccgtcttcggtga 257
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00266 158053 158235 len=183
(183 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218368.1 [gene=Rv3851] [protein=hypothe... 363 e-101
>lcl|NC_000962.2_cdsid_NP_218368.1 [gene=Rv3851]
[protein=hypothetical protein] [protein_id=NP_218368.1]
[location=4324683..4324967]
Length = 285
Score = 363 bits (183), Expect = e-101
Identities = 183/183 (100%)
Strand = Plus / Plus
Query: 1 gtgctgaccaccatcgcgaacccacctgcggcgtttgcgcacaccgcgcagctgtccacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 gtgctgaccaccatcgcgaacccacctgcggcgtttgcgcacaccgcgcagctgtccacc 162
Query: 61 gctacgcccgcacccgcagtcgccgccaccgacgcgaacgacgtcccgacgtggccattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 gctacgcccgcacccgcagtcgccgccaccgacgcgaacgacgtcccgacgtggccattc 222
Query: 121 gtcgtagggaccgtggcggcggttgccgtggctgcattgtgggccgttcggcgcgggcgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 gtcgtagggaccgtggcggcggttgccgtggctgcattgtgggccgttcggcgcgggcgc 282
Query: 181 taa 183
|||
Sbjct: 283 taa 285
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00268 158775 158665 len=111
(111 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218369.1 [gene=hns] [protein=histone-li... 163 3e-41
>lcl|NC_000962.2_cdsid_NP_218369.1 [gene=hns] [protein=histone-like
protein HNS] [protein_id=NP_218369.1]
[location=4325074..4325478]
Length = 405
Score = 163 bits (82), Expect = 3e-41
Identities = 82/82 (100%)
Strand = Plus / Minus
Query: 30 tcagcggcggcgcagttgccggatcagcagcagcgccagcaggctaagcgtgacggcaac 89
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 tcagcggcggcgcagttgccggatcagcagcagcgccagcaggctaagcgtgacggcaac 346
Query: 90 gatcagcggcacgggcgagtga 111
||||||||||||||||||||||
Sbjct: 345 gatcagcggcacgggcgagtga 324
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00272 160741 159272 len=1470
(1470 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218371.1 [gene=ethA] [protein=monooxyge... 2914 0.0
lcl|NC_000962.2_cdsid_NP_217599.1 [gene=Rv3083] [protein=monooxy... 66 8e-11
lcl|NC_000962.2_cdsid_NP_215079.1 [gene=Rv0565c] [protein=monoox... 56 8e-08
>lcl|NC_000962.2_cdsid_NP_218371.1 [gene=ethA] [protein=monooxygenase]
[protein_id=NP_218371.1]
[location=complement(4326004..4327473)]
Length = 1470
Score = 2914 bits (1470), Expect = 0.0
Identities = 1470/1470 (100%)
Strand = Plus / Plus
Query: 1 atgaccgagcacctcgacgttgtcatcgtgggcgctggaatctccggtgtcagcgcggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgaccgagcacctcgacgttgtcatcgtgggcgctggaatctccggtgtcagcgcggcc 60
Query: 61 tggcacctgcaggaccgttgcccgaccaagagctacgccatcctggaaaagcgggaatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggcacctgcaggaccgttgcccgaccaagagctacgccatcctggaaaagcgggaatcc 120
Query: 121 atgggcggcacctgggatttgttccgttatcccggaattcgctccgactccgacatgtac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgggcggcacctgggatttgttccgttatcccggaattcgctccgactccgacatgtac 180
Query: 181 acgctaggtttccgattccgtccctggaccggacggcaggcgatcgccgacggcaagccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acgctaggtttccgattccgtccctggaccggacggcaggcgatcgccgacggcaagccc 240
Query: 241 atcctcgagtacgtcaagagcaccgcggccatgtatggaatcgacaggcatatccggttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atcctcgagtacgtcaagagcaccgcggccatgtatggaatcgacaggcatatccggttc 300
Query: 301 caccacaaggtgatcagtgccgattggtcgaccgcggaaaaccgctggaccgttcacatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caccacaaggtgatcagtgccgattggtcgaccgcggaaaaccgctggaccgttcacatc 360
Query: 361 caaagccacggcacgctcagcgccctcacctgcgaattcctctttctgtgcagcggctac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caaagccacggcacgctcagcgccctcacctgcgaattcctctttctgtgcagcggctac 420
Query: 421 tacaactacgacgagggctactcgccgagattcgccggctcggaggatttcgtcgggccg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaactacgacgagggctactcgccgagattcgccggctcggaggatttcgtcgggccg 480
Query: 481 atcatccatccgcagcactggcccgaggacctcgactacgacgctaagaacatcgtcgtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atcatccatccgcagcactggcccgaggacctcgactacgacgctaagaacatcgtcgtg 540
Query: 541 atcggcagtggcgcaacggcggtcacgctcgtgccggcgctggcggactcgggcgccaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atcggcagtggcgcaacggcggtcacgctcgtgccggcgctggcggactcgggcgccaag 600
Query: 601 cacgtcacgatgctgcagcgctcacccacctacatcgtgtcgcagccagaccgggacggc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cacgtcacgatgctgcagcgctcacccacctacatcgtgtcgcagccagaccgggacggc 660
Query: 661 atcgccgagaagctcaaccgctggctgccggagaccatggcctacaccgcggtacggtgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atcgccgagaagctcaaccgctggctgccggagaccatggcctacaccgcggtacggtgg 720
Query: 721 aagaacgtgctgcgccaggcggccgtgtacagcgcctgccagaagtggccacggcgcatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aagaacgtgctgcgccaggcggccgtgtacagcgcctgccagaagtggccacggcgcatg 780
Query: 781 cggaagatgttcctgagcctgatccagcgccagctacccgaggggtacgacgtgcgaaag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 cggaagatgttcctgagcctgatccagcgccagctacccgaggggtacgacgtgcgaaag 840
Query: 841 cacttcggcccgcactacaacccctgggaccagcgattgtgcttggtgcccaacggcgac 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 cacttcggcccgcactacaacccctgggaccagcgattgtgcttggtgcccaacggcgac 900
Query: 901 ctgttccgggccattcgtcacgggaaggtcgaggtggtgaccgacaccattgaacggttc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ctgttccgggccattcgtcacgggaaggtcgaggtggtgaccgacaccattgaacggttc 960
Query: 961 accgcgaccggaatccggctgaactcaggtcgcgaactgccggctgacatcatcattacc 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 accgcgaccggaatccggctgaactcaggtcgcgaactgccggctgacatcatcattacc 1020
Query: 1021 gcaacggggttgaacctgcagctttttggtggggcgacggcgactatcgacggacaacaa 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gcaacggggttgaacctgcagctttttggtggggcgacggcgactatcgacggacaacaa 1080
Query: 1081 gtggacatcaccacgacgatggcctacaagggcatgatgctttccggcatccccaacatg 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gtggacatcaccacgacgatggcctacaagggcatgatgctttccggcatccccaacatg 1140
Query: 1141 gcctacacggttggctacaccaatgcctcctggacgctgaaggccgacctggtgtcggag 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gcctacacggttggctacaccaatgcctcctggacgctgaaggccgacctggtgtcggag 1200
Query: 1201 tttgtctgtcgcttgttgaattacatggacgacaacggttttgacaccgtggtcgtcgag 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 tttgtctgtcgcttgttgaattacatggacgacaacggttttgacaccgtggtcgtcgag 1260
Query: 1261 cgaccgggctcagatgtcgaagagcggcccttcatggagttcaccccaggttacgtgctg 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 cgaccgggctcagatgtcgaagagcggcccttcatggagttcaccccaggttacgtgctg 1320
Query: 1321 cgctcgctggacgagctgcccaagcagggttcgcgtacaccgtggcgcctgaatcagaac 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 cgctcgctggacgagctgcccaagcagggttcgcgtacaccgtggcgcctgaatcagaac 1380
Query: 1381 tacctacgtgacatccggctcatccggcgcggcaagatcgacgacgagggtctgcggttc 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 tacctacgtgacatccggctcatccggcgcggcaagatcgacgacgagggtctgcggttc 1440
Query: 1441 gccaaaaggcctgccccggtgggggtttag 1470
||||||||||||||||||||||||||||||
Sbjct: 1441 gccaaaaggcctgccccggtgggggtttag 1470
>lcl|NC_000962.2_cdsid_NP_217599.1 [gene=Rv3083]
[protein=monooxygenase] [protein_id=NP_217599.1]
[location=3448504..3449991]
Length = 1488
Score = 65.9 bits (33), Expect = 8e-11
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 490 ccgcagcactggcccgaggacctcgactacgacgctaagaacatcgtcgtgatcggcagt 549
||||||||||||||||| |||||||| || || ||||| ||||||| ||||||||
Sbjct: 496 ccgcagcactggcccgaagacctcgattattccggcaagaaggtcgtcgtcatcggcagc 555
Query: 550 ggcgcaacggcggtcac 566
|||||||||||||||||
Sbjct: 556 ggcgcaacggcggtcac 572
Score = 58.0 bits (29), Expect = 2e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 122 tgggcggcacctgggatttgttccgttatcccggaattcgctccgactccgacatgt 178
|||||||||||||||| |||||||| || || ||| |||| || |||||||||||||
Sbjct: 122 tgggcggcacctgggacttgttccgctacccgggagttcgttcggactccgacatgt 178
>lcl|NC_000962.2_cdsid_NP_215079.1 [gene=Rv0565c]
[protein=monooxygenase] [protein_id=NP_215079.1]
[location=complement(656010..657470)]
Length = 1461
Score = 56.0 bits (28), Expect = 8e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 410 gcagcggctactacaactacgacgagggctac 441
||||||||||||||||||| ||||||||||||
Sbjct: 425 gcagcggctactacaactatgacgagggctac 456
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00276 163736 164788 len=1053
(1053 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218375.1 [gene=gltD] [protein=glutamate... 2058 0.0
>lcl|NC_000962.2_cdsid_NP_218375.1 [gene=gltD] [protein=glutamate
synthase subunit beta] [protein_id=NP_218375.1]
[location=complement(4330039..4331505)]
Length = 1467
Score = 2058 bits (1038), Expect = 0.0
Identities = 1038/1038 (100%)
Strand = Plus / Minus
Query: 1 atgcgcggccgatacccgatacatcagcgggtaagtcggccatggggtggattcggcgcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1038 atgcgcggccgatacccgatacatcagcgggtaagtcggccatggggtggattcggcgcg 979
Query: 61 ggcgtccggtggacgcggcatgatctcgaactggtgcacggcgatcgcgccctggcggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 978 ggcgtccggtggacgcggcatgatctcgaactggtgcacggcgatcgcgccctggcggtg 919
Query: 121 cacggtacccaggcagtccgccccggtgtcgccgccaccgatgatgacgaccttcttgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 918 cacggtacccaggcagtccgccccggtgtcgccgccaccgatgatgacgaccttcttgcc 859
Query: 181 ctttgcggtgatcggcggctgcccgtcctcatcgaggacgtcatctccttcttgcacccg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 ctttgcggtgatcggcggctgcccgtcctcatcgaggacgtcatctccttcttgcacccg 799
Query: 241 gttggcccacggcagaaactccatcgcctgatggacgccctccagctcgcggccgggaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 gttggcccacggcagaaactccatcgcctgatggacgccctccagctcgcggccgggaat 739
Query: 301 cggcagctcgcgccaagcggttgcgccaccggccaatacgaccgcatcgaaatcagcgcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 cggcagctcgcgccaagcggttgcgccaccggccaatacgaccgcatcgaaatcagcgcg 679
Query: 361 cagcttttcggcgctaatgtcgaccccgacgttgacgcccggccggaattcggttccttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 cagcttttcggcgctaatgtcgaccccgacgttgacgcccggccggaattcggttccttc 619
Query: 421 ggagcgcatttggtccaaacgccgatcaagatgccgcttttccatcttgaattccgggat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ggagcgcatttggtccaaacgccgatcaagatgccgcttttccatcttgaattccgggat 559
Query: 481 gccgtaacgcagcagcccgccgatgcggtcttcgcgctcgaaaacggtgacggtgtgacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gccgtaacgcagcagcccgccgatgcggtcttcgcgctcgaaaacggtgacggtgtgacc 499
Query: 541 cgcccgggtgagttgctgggcggcggccaaacccgccggccccgaacccaccacagcaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 cgcccgggtgagttgctgggcggcggccaaacccgccggccccgaacccaccacagcaac 439
Query: 601 cgtttgcccggtcagcttccgcggcggacgtggttgcacccatccttcgtcgaaggcctt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 cgtttgcccggtcagcttccgcggcggacgtggttgcacccatccttcgtcgaaggcctt 379
Query: 661 gtcgatgatctccagctcgatctgcttgatcgtcaccggatcctggttgatgcccagcac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gtcgatgatctccagctcgatctgcttgatcgtcaccggatcctggttgatgcccagcac 319
Query: 721 acacgccggctcgcacggagccgggcacaaccggccggtgaagtcggggaagttgttggt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 acacgccggctcgcacggagccgggcacaaccggccggtgaagtcggggaagttgttggt 259
Query: 781 ggcgtgcagccgttcgattgcgtcgcgccagcggccccggcggaccagatcgttccattc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ggcgtgcagccgttcgattgcgtcgcgccagcggccccggcggaccagatcgttccattc 199
Query: 841 cgggatcaagttacccagcggacatccgttgtgacagaacggaatgccgcaatccatgca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 cgggatcaagttacccagcggacatccgttgtgacagaacggaatgccgcaatccatgca 139
Query: 901 gcgggtcgcctgttggcgcaggctctcgttgtcgaattcctcgtagacttcccgccagtc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 gcgggtcgcctgttggcgcaggctctcgttgtcgaattcctcgtagacttcccgccagtc 79
Query: 961 tcgcagccgcagcgggaccggccgtcgcttcggcaatttccggtgggtgtatttgaggaa 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 tcgcagccgcagcgggaccggccgtcgcttcggcaatttccggtgggtgtatttgaggaa 19
Query: 1021 gccgcccggatcagccat 1038
||||||||||||||||||
Sbjct: 18 gccgcccggatcagccat 1
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00277 163759 163307 len=453
(453 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218375.1 [gene=gltD] [protein=glutamate... 898 0.0
>lcl|NC_000962.2_cdsid_NP_218375.1 [gene=gltD] [protein=glutamate
synthase subunit beta] [protein_id=NP_218375.1]
[location=complement(4330039..4331505)]
Length = 1467
Score = 898 bits (453), Expect = 0.0
Identities = 453/453 (100%)
Strand = Plus / Plus
Query: 1 atgtatcgggtatcggccgcgcatgaggagggtggcgagcgggtgttctcggtcaacacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 atgtatcgggtatcggccgcgcatgaggagggtggcgagcgggtgttctcggtcaacacc 1074
Query: 61 gaggcgttcgtcggcacggacgggcgcgtgagcgcgctgcgggcacacgaagtgaccatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1075 gaggcgttcgtcggcacggacgggcgcgtgagcgcgctgcgggcacacgaagtgaccatg 1134
Query: 121 ctggatggcaagttcgtcaaggttgagggctccgacttcgagctcgaagccgacctggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1135 ctggatggcaagttcgtcaaggttgagggctccgacttcgagctcgaagccgacctggtg 1194
Query: 181 ttgctggcgatgggtttcgtcggcccggaacgggcgggcctgttgaccgacctcggagtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1195 ttgctggcgatgggtttcgtcggcccggaacgggcgggcctgttgaccgacctcggagtg 1254
Query: 241 aagttcaccgagcgtgggaacgtggcccgtggcgacgacttcgacacctcggttcctggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1255 aagttcaccgagcgtgggaacgtggcccgtggcgacgacttcgacacctcggttcctggt 1314
Query: 301 gtgttcgtagccggtgacatgggccggggccagtcattgatcgtctgggcgattgccgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1315 gtgttcgtagccggtgacatgggccggggccagtcattgatcgtctgggcgattgccgag 1374
Query: 361 ggccgggccgctgccgcggccgtagaccggtacttgatgggttccagtgccctgccggcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1375 ggccgggccgctgccgcggccgtagaccggtacttgatgggttccagtgccctgccggcg 1434
Query: 421 cctgttaagccgaccgctgcaccgcttcaataa 453
|||||||||||||||||||||||||||||||||
Sbjct: 1435 cctgttaagccgaccgctgcaccgcttcaataa 1467
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00281 169349 164766 len=4584
(4584 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218376.1 [gene=gltB] [protein=ferredoxi... 9087 0.0
>lcl|NC_000962.2_cdsid_NP_218376.1 [gene=gltB]
[protein=ferredoxin-dependent glutamate synthase [NADPH]
large subunit] [protein_id=NP_218376.1]
[location=complement(4331498..4336081)]
Length = 4584
Score = 9087 bits (4584), Expect = 0.0
Identities = 4584/4584 (100%)
Strand = Plus / Plus
Query: 1 atgacgcctaagcgcgtcgggttgtataaccccgcgttcgaacacgattcgtgcggggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgacgcctaagcgcgtcgggttgtataaccccgcgttcgaacacgattcgtgcggggtt 60
Query: 61 gccatggttgtggacatgcacggccgtcgtagccgcgacatcgtggacaaggcgatcacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gccatggttgtggacatgcacggccgtcgtagccgcgacatcgtggacaaggcgatcacc 120
Query: 121 gccctgctcaacctcgagcatcggggcgcgcaaggcgccgaaccccgcagcggtgacggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gccctgctcaacctcgagcatcggggcgcgcaaggcgccgaaccccgcagcggtgacggc 180
Query: 181 gcgggcatcctgattcaggttccggacgaattccttcgcgaagccgtggatttcgagttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcgggcatcctgattcaggttccggacgaattccttcgcgaagccgtggatttcgagttg 240
Query: 241 cctgccccaggcagctatgccacgggtatcgcgttcttgccgcagtcatctaaagacgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cctgccccaggcagctatgccacgggtatcgcgttcttgccgcagtcatctaaagacgcc 300
Query: 301 gccgcggcctgcgccgccgtacagaaaatcgccgaggccgaggggctgcaagtcctgggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gccgcggcctgcgccgccgtacagaaaatcgccgaggccgaggggctgcaagtcctgggt 360
Query: 361 tggcgcagcgtccccaccgacgactcatcgctgggcgcgctgtcccgtgatgccatgccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tggcgcagcgtccccaccgacgactcatcgctgggcgcgctgtcccgtgatgccatgccc 420
Query: 421 accttccggcaggtgttcttggctggcgcgtccggcatggcgttggagcggcgctgctat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 accttccggcaggtgttcttggctggcgcgtccggcatggcgttggagcggcgctgctat 480
Query: 481 gtggtccgcaagcgggccgagcatgaactcggcaccaagggtccgggtcaagacgggccg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtggtccgcaagcgggccgagcatgaactcggcaccaagggtccgggtcaagacgggccg 540
Query: 541 ggccgggaaaccgtgtacttcccgagcctgtccggccagacgctcgtctacaagggcatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggccgggaaaccgtgtacttcccgagcctgtccggccagacgctcgtctacaagggcatg 600
Query: 601 ctgaccaccccgcagctcaaggccttctacctcgatttgcaggacgagcgactgaccagc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctgaccaccccgcagctcaaggccttctacctcgatttgcaggacgagcgactgaccagc 660
Query: 661 gcgctaggcatcgtgcactcgcggttctccacgaacactttcccgtcctggccgctggcg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gcgctaggcatcgtgcactcgcggttctccacgaacactttcccgtcctggccgctggcg 720
Query: 721 catccattccggcggatcgcgcacaacggggagatcaacaccgtcaccggtaacgagaac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 catccattccggcggatcgcgcacaacggggagatcaacaccgtcaccggtaacgagaac 780
Query: 781 tggatgcgggcccgcgaggcgctgatcaagaccgacatctttgggtcggcggccgatgtc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tggatgcgggcccgcgaggcgctgatcaagaccgacatctttgggtcggcggccgatgtc 840
Query: 841 gaaaagctgttcccgatctgtaccccgggtgcctcggacaccgcgcgcttcgacgaggtg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gaaaagctgttcccgatctgtaccccgggtgcctcggacaccgcgcgcttcgacgaggtg 900
Query: 901 ctcgaactgctgcacctgggcggacgcagcctggcccacgcggtgctgatgatgatccct 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ctcgaactgctgcacctgggcggacgcagcctggcccacgcggtgctgatgatgatccct 960
Query: 961 gaggcctgggagcgccacgagtcgatggaccccgcgcggcgggcgttttaccagtatcac 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gaggcctgggagcgccacgagtcgatggaccccgcgcggcgggcgttttaccagtatcac 1020
Query: 1021 gcctcgttgatggagccgtgggacggcccggcgtcgatgacgttcaccgacggcaccgtc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gcctcgttgatggagccgtgggacggcccggcgtcgatgacgttcaccgacggcaccgtc 1080
Query: 1081 gtgggcgccgtgctggaccgcaatggcctacgcccgtcgcgaatctgggtcaccgacgac 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gtgggcgccgtgctggaccgcaatggcctacgcccgtcgcgaatctgggtcaccgacgac 1140
Query: 1141 ggtttggtggtgatggcttccgaggccggtgtgttggacctgcatccgtcgacggtggtg 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 ggtttggtggtgatggcttccgaggccggtgtgttggacctgcatccgtcgacggtggtg 1200
Query: 1201 cgccggatgcggctgcagccgggccggatgttcttggtggacaccgcgcagggccgcatc 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 cgccggatgcggctgcagccgggccggatgttcttggtggacaccgcgcagggccgcatc 1260
Query: 1261 gtctccgatgaggagatcaaggccgacctggcggccgagcatccgtatcaggagtggctt 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 gtctccgatgaggagatcaaggccgacctggcggccgagcatccgtatcaggagtggctt 1320
Query: 1321 gacaacggactagttccgctcgacgaattgccggagggcaaagacgtgcggatgccccac 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 gacaacggactagttccgctcgacgaattgccggagggcaaagacgtgcggatgccccac 1380
Query: 1381 catcgaatcgtcatgcggcagttggcattcggctatacctacgaggagctcaacctgctg 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 catcgaatcgtcatgcggcagttggcattcggctatacctacgaggagctcaacctgctg 1440
Query: 1441 gtagcgccgatggctcggctcggtgccgagccaatcgggtcgatgggcaccgacactcca 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 gtagcgccgatggctcggctcggtgccgagccaatcgggtcgatgggcaccgacactcca 1500
Query: 1501 gttgcggtgttgtcgcagcgtccgcgcatgctctacgactacttccatcagctgttcgcc 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 gttgcggtgttgtcgcagcgtccgcgcatgctctacgactacttccatcagctgttcgcc 1560
Query: 1561 caggtgaccaacccgccgttggacgccatccgcgaggaggtggtgaccagcctgcagggc 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 caggtgaccaacccgccgttggacgccatccgcgaggaggtggtgaccagcctgcagggc 1620
Query: 1621 accaccggcggcgaacgtgacttgctcaacccggaccagaactcctgccaccagatcgtg 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 accaccggcggcgaacgtgacttgctcaacccggaccagaactcctgccaccagatcgtg 1680
Query: 1681 ctgccccagccgattctgcgtaaccacgagctcgccaagctggtcagcctcgatcccaac 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 ctgccccagccgattctgcgtaaccacgagctcgccaagctggtcagcctcgatcccaac 1740
Query: 1741 gacaaggtcaatgggcgcccacacggattgcggtccaaggtgattcgctgtctgtaccgg 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 gacaaggtcaatgggcgcccacacggattgcggtccaaggtgattcgctgtctgtaccgg 1800
Query: 1801 gtctccgagggaggtgctgggctggctgccgcgctggaagaggtacgtggcgcggcggcg 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 gtctccgagggaggtgctgggctggctgccgcgctggaagaggtacgtggcgcggcggcg 1860
Query: 1861 gcggcaatcgccgacggcgctcggatcatcatcttgtccgaccgcgagtccgacgaggaa 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 gcggcaatcgccgacggcgctcggatcatcatcttgtccgaccgcgagtccgacgaggaa 1920
Query: 1921 atggctccgataccgtcgctgctcgccgttgcgggagtgcaccaccacctggttcgggaa 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 atggctccgataccgtcgctgctcgccgttgcgggagtgcaccaccacctggttcgggaa 1980
Query: 1981 cggacccgcacccaagtgggtctggtggtcgagtccggtgatgcccgcgaggtgcaccac 2040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1981 cggacccgcacccaagtgggtctggtggtcgagtccggtgatgcccgcgaggtgcaccac 2040
Query: 2041 atggccgcgctggtcggattcggcgcggccgcgatcaacccctacctggtgttcgagtcg 2100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2041 atggccgcgctggtcggattcggcgcggccgcgatcaacccctacctggtgttcgagtcg 2100
Query: 2101 atcgaggacatgctcgaccgcggtgttatcgagggcatcgaccgtacggcggcgctgaac 2160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2101 atcgaggacatgctcgaccgcggtgttatcgagggcatcgaccgtacggcggcgctgaac 2160
Query: 2161 aactacatcaaagccgcaggtaagggtgtgctgaaagtgatgtcgaagatgggcatctcg 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2161 aactacatcaaagccgcaggtaagggtgtgctgaaagtgatgtcgaagatgggcatctcg 2220
Query: 2221 acgctggcctcctacaccggtgcgcaactgttccaggctgtcggcatctccgagcaagtg 2280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2221 acgctggcctcctacaccggtgcgcaactgttccaggctgtcggcatctccgagcaagtg 2280
Query: 2281 ctcgacgaatacttcaccgggcttacctgccccaccggcgggatcaccctggatgacatc 2340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2281 ctcgacgaatacttcaccgggcttacctgccccaccggcgggatcaccctggatgacatc 2340
Query: 2341 gcggccgatgtcgcagcccggcaccggctggcctatctggaccggccggacgaacgcgct 2400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2341 gcggccgatgtcgcagcccggcaccggctggcctatctggaccggccggacgaacgcgct 2400
Query: 2401 caccgcgaactcgaggtgggtggggaataccagtggcgccgcgagggcgagtaccacctg 2460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2401 caccgcgaactcgaggtgggtggggaataccagtggcgccgcgagggcgagtaccacctg 2460
Query: 2461 ttcaacccggagactgtgttcaagctgcagcactccacgcgaaccggccagtacaagatc 2520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2461 ttcaacccggagactgtgttcaagctgcagcactccacgcgaaccggccagtacaagatc 2520
Query: 2521 ttcaaggagtacacccgtctggtcgacgaccagagcgagcggatggcatcgctgcgtggt 2580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2521 ttcaaggagtacacccgtctggtcgacgaccagagcgagcggatggcatcgctgcgtggt 2580
Query: 2581 ctgctcaagttccgtaccggggttcgtcctccagtcccgctggacgaggtcgagccggcc 2640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2581 ctgctcaagttccgtaccggggttcgtcctccagtcccgctggacgaggtcgagccggcc 2640
Query: 2641 agcgaaatcgtcaagcgcttctcaacgggggcgatgagctacggctcgatttccgctgaa 2700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2641 agcgaaatcgtcaagcgcttctcaacgggggcgatgagctacggctcgatttccgctgaa 2700
Query: 2701 gcgcacgagacgctggccatcgcaatgaaccggcttggtgcccggtcaaactgtggtgaa 2760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2701 gcgcacgagacgctggccatcgcaatgaaccggcttggtgcccggtcaaactgtggtgaa 2760
Query: 2761 ggcggcgaggacgtcaagcgatttgaccgcgaccccaacggggattggcgccgaagcgcc 2820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2761 ggcggcgaggacgtcaagcgatttgaccgcgaccccaacggggattggcgccgaagcgcc 2820
Query: 2821 attaagcaggtagcctccgcccggtttggcgtcacctcgcattacctgaccaactgcacc 2880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2821 attaagcaggtagcctccgcccggtttggcgtcacctcgcattacctgaccaactgcacc 2880
Query: 2881 gacctccagatcaagatggcgcagggcgcgaaacctggtgagggaggtcagcttccgggg 2940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2881 gacctccagatcaagatggcgcagggcgcgaaacctggtgagggaggtcagcttccgggg 2940
Query: 2941 cacaaggtgtacccttgggtggccgaggtccggcactccacgcccggtgtcggtctgatc 3000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2941 cacaaggtgtacccttgggtggccgaggtccggcactccacgcccggtgtcggtctgatc 3000
Query: 3001 tcaccgccgccccaccacgacatctactccattgaggatctggcgcagctgatccacgac 3060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3001 tcaccgccgccccaccacgacatctactccattgaggatctggcgcagctgatccacgac 3060
Query: 3061 ctaaagaacgccaatccatccgcgcgggtacacgtcaagctggtctccgaaaacggggta 3120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3061 ctaaagaacgccaatccatccgcgcgggtacacgtcaagctggtctccgaaaacggggta 3120
Query: 3121 gggacggttgcggctggcgtttccaaagcccacgccgacgtggtcttgatctcagggcac 3180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3121 gggacggttgcggctggcgtttccaaagcccacgccgacgtggtcttgatctcagggcac 3180
Query: 3181 gatggtggcaccggcgcgaccccgctgacatcgatgaagcacgccggagcaccctgggag 3240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3181 gatggtggcaccggcgcgaccccgctgacatcgatgaagcacgccggagcaccctgggag 3240
Query: 3241 ttgggtctggctgagacacagcagacgttgctgctcaacgggttacgtgatcgaattgtg 3300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3241 ttgggtctggctgagacacagcagacgttgctgctcaacgggttacgtgatcgaattgtg 3300
Query: 3301 gtccaggtggacggtcagctcaagacgggtcgcgatgtgatgatcgctacgctgctcggg 3360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3301 gtccaggtggacggtcagctcaagacgggtcgcgatgtgatgatcgctacgctgctcggg 3360
Query: 3361 gcagaagagttcggattcgcgaccgcgccgttggtagtggccggctgcatcatgatgcgg 3420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3361 gcagaagagttcggattcgcgaccgcgccgttggtagtggccggctgcatcatgatgcgg 3420
Query: 3421 gtgtgccacctggacacgtgcccggttggtgtggccacccagaatccgttgctccgggag 3480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3421 gtgtgccacctggacacgtgcccggttggtgtggccacccagaatccgttgctccgggag 3480
Query: 3481 cggttcaccgggaagcccgagttcgtggagaacttcttcatgttcatcgccgaggaagtc 3540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3481 cggttcaccgggaagcccgagttcgtggagaacttcttcatgttcatcgccgaggaagtc 3540
Query: 3541 cgggaatatttggcgcagttgggcttccgcactgtgaacgaggcggttggacaggcaggt 3600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3541 cgggaatatttggcgcagttgggcttccgcactgtgaacgaggcggttggacaggcaggt 3600
Query: 3601 gcgctggacaccacgctggcacgcgcgcactggaaggcgcataagctggatctggcgccg 3660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3601 gcgctggacaccacgctggcacgcgcgcactggaaggcgcataagctggatctggcgccg 3660
Query: 3661 gtgctccacgagccggagtcggccttcatgaatcaggatctgtactgcagttcgcgccag 3720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3661 gtgctccacgagccggagtcggccttcatgaatcaggatctgtactgcagttcgcgccag 3720
Query: 3721 gatcacggtctagacaaggcgctcgatcagcagctgatcgtgatgagcagggaagcactg 3780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3721 gatcacggtctagacaaggcgctcgatcagcagctgatcgtgatgagcagggaagcactg 3780
Query: 3781 gattccggcaagccggtccgcttctccaccaccataggcaatgtcaaccgcacggtgggc 3840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3781 gattccggcaagccggtccgcttctccaccaccataggcaatgtcaaccgcacggtgggc 3840
Query: 3841 accatgctcggccacgagctgacgaaggcctatggcggccaaggcttgccggacggaacc 3900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3841 accatgctcggccacgagctgacgaaggcctatggcggccaaggcttgccggacggaacc 3900
Query: 3901 atcgatatcacgttcgacggatccgcgggaaacagcttcggagccttcgtgcccaaggga 3960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3901 atcgatatcacgttcgacggatccgcgggaaacagcttcggagccttcgtgcccaaggga 3960
Query: 3961 attaccttgcgggtgtatggcgacgccaatgactacgtcggcaaagggctatccggtggc 4020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3961 attaccttgcgggtgtatggcgacgccaatgactacgtcggcaaagggctatccggtggc 4020
Query: 4021 cggattgtggtgcggccgtcggatgacgcgccgcaggattatgtcgccgaggacaacatc 4080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4021 cggattgtggtgcggccgtcggatgacgcgccgcaggattatgtcgccgaggacaacatc 4080
Query: 4081 atcgggggcaatgtgattctgttcggcgcaaccagtggcgaggtttacctgcgcggtgtg 4140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4081 atcgggggcaatgtgattctgttcggcgcaaccagtggcgaggtttacctgcgcggtgtg 4140
Query: 4141 gtaggcgaacggttcgcggtgcgcaattccggggcccacgccgtggtagagggtgtcggc 4200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4141 gtaggcgaacggttcgcggtgcgcaattccggggcccacgccgtggtagagggtgtcggc 4200
Query: 4201 gatcacggctgcgagtacatgaccggcggcagggttgtcattctgggccgcaccggccgt 4260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4201 gatcacggctgcgagtacatgaccggcggcagggttgtcattctgggccgcaccggccgt 4260
Query: 4261 aactttgcggcgggtatgtccggcggtgtggcctatgtttacgatcccgacggtgaactg 4320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4261 aactttgcggcgggtatgtccggcggtgtggcctatgtttacgatcccgacggtgaactg 4320
Query: 4321 ccggccaacctcaactcggagatggtcgaactcgagaccctcgacgaggatgacgcggac 4380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4321 ccggccaacctcaactcggagatggtcgaactcgagaccctcgacgaggatgacgcggac 4380
Query: 4381 tggctgcacggcaccatacaagtgcacgtcgacgctaccgattccgctgtcggccagcgg 4440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4381 tggctgcacggcaccatacaagtgcacgtcgacgctaccgattccgctgtcggccagcgg 4440
Query: 4441 attctgtccgactggtcgggacagcagcgccacttcgtcaaggtgatgccgcgtgactac 4500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4441 attctgtccgactggtcgggacagcagcgccacttcgtcaaggtgatgccgcgtgactac 4500
Query: 4501 aaacgggtcctgcaggcgatcgccctggctgaacgtgacggcgttgatgtcgacaaggcg 4560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4501 aaacgggtcctgcaggcgatcgccctggctgaacgtgacggcgttgatgtcgacaaggcg 4560
Query: 4561 atcatggcggctgcgcatggctga 4584
||||||||||||||||||||||||
Sbjct: 4561 atcatggcggctgcgcatggctga 4584
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00282 170045 171217 len=1173
(1173 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218377.1 [gene=Rv3860] [protein=hypothe... 2325 0.0
>lcl|NC_000962.2_cdsid_NP_218377.1 [gene=Rv3860] [protein=hypothetical
protein] [protein_id=NP_218377.1]
[location=4336777..4337949]
Length = 1173
Score = 2325 bits (1173), Expect = 0.0
Identities = 1173/1173 (100%)
Strand = Plus / Plus
Query: 1 atgtacgagcgtgacgaattcctgcgcgatcggatccgaccacaccagcccggcaccccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgtacgagcgtgacgaattcctgcgcgatcggatccgaccacaccagcccggcaccccg 60
Query: 61 cggggatactcgccccgtccgccgtccggagatcgctgccccgcgccaccgcctggccgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cggggatactcgccccgtccgccgtccggagatcgctgccccgcgccaccgcctggccgg 120
Query: 121 cacgctgctgccgctacgccaccagggccgccgcgcctgccttcagctccactgcgtcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cacgctgctgccgctacgccaccagggccgccgcgcctgccttcagctccactgcgtcca 180
Query: 181 ttgccggacccggcttggccacgccagccggaggccccgccaccgagcacctgggccgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgccggacccggcttggccacgccagccggaggccccgccaccgagcacctgggccgac 240
Query: 241 cccgccctggcgccgatacgcagtcggacgcgacccggcgagcgtggttggcgacgcatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cccgccctggcgccgatacgcagtcggacgcgacccggcgagcgtggttggcgacgcatg 300
Query: 301 gtgcggctggtcacctttggccttgtcggcctgggccggtcgggcatgcagcgccaggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtgcggctggtcacctttggccttgtcggcctgggccggtcgggcatgcagcgccaggag 360
Query: 361 gcccaattcgaagcaacgatacgaaccgtcctgcatggcaaccacaaggtcgccgtgctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcccaattcgaagcaacgatacgaaccgtcctgcatggcaaccacaaggtcgccgtgctg 420
Query: 421 ggcaaaggaggtgtgggaaagacgtcggttgcggcgtgcgtcggatcgatccttgccgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggcaaaggaggtgtgggaaagacgtcggttgcggcgtgcgtcggatcgatccttgccgaa 480
Query: 481 ctgcgccagcaggaccgtatcgtcgggatcgacgccgacaccgccttcggcaggctgagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctgcgccagcaggaccgtatcgtcgggatcgacgccgacaccgccttcggcaggctgagc 540
Query: 541 agccgaatcgatcctcgagcagctggttcgttctgggagctgaccaccgacacgaatctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agccgaatcgatcctcgagcagctggttcgttctgggagctgaccaccgacacgaatctg 600
Query: 601 cggtccttcaccgatatcaccgcgcgcctgggccgaaattccgcgggactgtacgtcctg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cggtccttcaccgatatcaccgcgcgcctgggccgaaattccgcgggactgtacgtcctg 660
Query: 661 gcaggccagccggcatccggtccgcgccgggtgctcgatccggccatctaccgcgaagcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gcaggccagccggcatccggtccgcgccgggtgctcgatccggccatctaccgcgaagcc 720
Query: 721 gccctaaggttggatcaccatttcgcaatctcggtgatcgactgcggttcctccatggag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gccctaaggttggatcaccatttcgcaatctcggtgatcgactgcggttcctccatggag 780
Query: 781 gcggcggtcacccaggaagtattgcgcgatgtggatgctctgatcgtggtgtcctcgccc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gcggcggtcacccaggaagtattgcgcgatgtggatgctctgatcgtggtgtcctcgccc 840
Query: 841 tgggcggatggtgcctccgctgccgccaacaccatcgaatggctgtcggattatggcctg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tgggcggatggtgcctccgctgccgccaacaccatcgaatggctgtcggattatggcctg 900
Query: 901 acaggtttgttgcgacgcagcatcgtggtgctcaacgattcggacggacacgccgacaag 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 acaggtttgttgcgacgcagcatcgtggtgctcaacgattcggacggacacgccgacaag 960
Query: 961 cgcaccaagtcattgctggcccaggaattcatcgaccacgggcagcctgtggtcgaggtg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 cgcaccaagtcattgctggcccaggaattcatcgaccacgggcagcctgtggtcgaggtg 1020
Query: 1021 cccttcgatccccatttgcggcccgggggggtcatcgatatgagccacgaaatggccccg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 cccttcgatccccatttgcggcccgggggggtcatcgatatgagccacgaaatggccccg 1080
Query: 1081 acgacgcggctgaaaatcctgcaggtcgccgcgacggtgacggcgtacttcgcgtcgcga 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 acgacgcggctgaaaatcctgcaggtcgccgcgacggtgacggcgtacttcgcgtcgcga 1140
Query: 1141 cccgccgacgcacacggcagcccgccccggtga 1173
|||||||||||||||||||||||||||||||||
Sbjct: 1141 cccgccgacgcacacggcagcccgccccggtga 1173
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00283 171214 171540 len=327
(327 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218378.1 [gene=Rv3861] [protein=hypothe... 648 0.0
lcl|NC_000962.2_cdsid_NP_218379.1 [gene=whiB6] [protein=transcri... 202 1e-52
>lcl|NC_000962.2_cdsid_NP_218378.1 [gene=Rv3861]
[protein=hypothetical protein] [protein_id=NP_218378.1]
[location=4337946..4338272]
Length = 327
Score = 648 bits (327), Expect = 0.0
Identities = 327/327 (100%)
Strand = Plus / Plus
Query: 1 gtgacctggctggctgacccggtcggcaacagcaggatcgcccgagcgcaggcctgcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgacctggctggctgacccggtcggcaacagcaggatcgcccgagcgcaggcctgcaaa 60
Query: 61 acgtcaatctcggcgcccatcgtcgaatcctggcgggcgcaacgcggcgcgcaatgtgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acgtcaatctcggcgcccatcgtcgaatcctggcgggcgcaacgcggcgcgcaatgtgga 120
Query: 121 cagcgcgagaaatcttgtcgatgttctcgcgctgtccacatccagggcatctcaccgcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cagcgcgagaaatcttgtcgatgttctcgcgctgtccacatccagggcatctcaccgcca 180
Query: 181 ctgttccgcagacccctcgaaccagcggtccaggcggcggttgcgtcatgccgattgggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctgttccgcagacccctcgaaccagcggtccaggcggcggttgcgtcatgccgattgggc 240
Query: 241 agacacccggtggtcgcgcaccgggtaaccgttgcgctcggccagggatcgcagctggcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agacacccggtggtcgcgcaccgggtaaccgttgcgctcggccagggatcgcagctggcc 300
Query: 301 caacgcgaatgcccgcgcccggcctga 327
|||||||||||||||||||||||||||
Sbjct: 301 caacgcgaatgcccgcgcccggcctga 327
>lcl|NC_000962.2_cdsid_NP_218379.1 [gene=whiB6]
[protein=transcriptional regulatory protein WHIB-like
WHIB6] [protein_id=NP_218379.1]
[location=complement(4338171..4338521)]
Length = 351
Score = 202 bits (102), Expect = 1e-52
Identities = 102/102 (100%)
Strand = Plus / Minus
Query: 226 tcatgccgattgggcagacacccggtggtcgcgcaccgggtaaccgttgcgctcggccag 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tcatgccgattgggcagacacccggtggtcgcgcaccgggtaaccgttgcgctcggccag 292
Query: 286 ggatcgcagctggcccaacgcgaatgcccgcgcccggcctga 327
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ggatcgcagctggcccaacgcgaatgcccgcgcccggcctga 250
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00286 174629 174384 len=246
(246 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218381.1 [gene=Rv3864] [protein=hypothe... 488 e-138
>lcl|NC_000962.2_cdsid_NP_218381.1 [gene=Rv3864] [protein=hypothetical
protein] [protein_id=NP_218381.1]
[location=4340270..4341478]
Length = 1209
Score = 488 bits (246), Expect = e-138
Identities = 246/246 (100%)
Strand = Plus / Minus
Query: 1 gtgctgctggcctccttgctgggcctgcgacgagatcagttgcgcttgttggctgcccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1092 gtgctgctggcctccttgctgggcctgcgacgagatcagttgcgcttgttggctgcccat 1033
Query: 61 gctggccagttggctggggccaccgccggccgccacgagctgttgcagctgacccatggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1032 gctggccagttggctggggccaccgccggccgccacgagctgttgcagctgacccatggt 973
Query: 121 ggcggtcacctgacccacggtgggcaaactggcaaagctgagcagattgccaaaacccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 972 ggcggtcacctgacccacggtgggcaaactggcaaagctgagcagattgccaaaacccaa 913
Query: 181 gctgggcaggccggcgaagccgcccaagaagtcaggcaaagcggccagctcagtccaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 912 gctgggcaggccggcgaagccgcccaagaagtcaggcaaagcggccagctcagtccaggt 853
Query: 241 gggtaa 246
||||||
Sbjct: 852 gggtaa 847
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00287 175661 175467 len=195
(195 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218383.1 [gene=Rv3866] [protein=hypothe... 387 e-108
>lcl|NC_000962.2_cdsid_NP_218383.1 [gene=Rv3866]
[protein=hypothetical protein] [protein_id=NP_218383.1]
[location=4341880..4342731]
Length = 852
Score = 387 bits (195), Expect = e-108
Identities = 195/195 (100%)
Strand = Plus / Minus
Query: 1 ttgtgcattcggctagctcggttgccacacccgtcaggggttcgacgttggcgggttcgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ttgtgcattcggctagctcggttgccacacccgtcaggggttcgacgttggcgggttcgg 455
Query: 61 cgggccccagcaccgctgtcaccatgcccgccaagccgacctgcggcgccaccaactgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgggccccagcaccgctgtcaccatgcccgccaagccgacctgcggcgccaccaactgca 395
Query: 121 gcaccagcatgtcgccgtcgcgcgccgcgatcacatggcggtcgcccctgcggcacacga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gcaccagcatgtcgccgtcgcgcgccgcgatcacatggcggtcgcccctgcggcacacga 335
Query: 181 cgaagcgcaccatga 195
|||||||||||||||
Sbjct: 334 cgaagcgcaccatga 320
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00291 176552 178303 len=1752
(1752 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218385.1 [gene=Rv3868] [protein=hypothe... 3414 0.0
lcl|NC_000962.2_cdsid_NP_218384.1 [gene=Rv3867] [protein=hypothe... 76 1e-13
lcl|NC_000962.2_cdsid_NP_214796.1 [gene=Rv0282] [protein=hypothe... 62 2e-09
>lcl|NC_000962.2_cdsid_NP_218385.1 [gene=Rv3868] [protein=hypothetical
protein] [protein_id=NP_218385.1]
[location=4343314..4345035]
Length = 1722
Score = 3414 bits (1722), Expect = 0.0
Identities = 1722/1722 (100%)
Strand = Plus / Plus
Query: 31 atgactgatcgcttggccagtctgttcgaaagcgccgtcagcatgttgccgatgtcggag 90
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgactgatcgcttggccagtctgttcgaaagcgccgtcagcatgttgccgatgtcggag 60
Query: 91 gcgcggtcgctagatctgttcaccgagatcaccaactacgacgaatccgcttgcgacgca 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcgcggtcgctagatctgttcaccgagatcaccaactacgacgaatccgcttgcgacgca 120
Query: 151 tggatcggccggatccggtgtggggacaccgaccgggtgacgctgtttcgcgcctggtat 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggatcggccggatccggtgtggggacaccgaccgggtgacgctgtttcgcgcctggtat 180
Query: 211 tcgcgccgcaatttcggacagttgtcgggatcggtccagatctcgatgagcacgttaaac 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcgcgccgcaatttcggacagttgtcgggatcggtccagatctcgatgagcacgttaaac 240
Query: 271 gccaggattgccatcggggggctgtacggcgatatcacctacccggtcacctcgccgcta 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gccaggattgccatcggggggctgtacggcgatatcacctacccggtcacctcgccgcta 300
Query: 331 gcgatcaccatgggctttgccgcatgcgaggcagcgcaaggcaattacgccgacgccatg 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcgatcaccatgggctttgccgcatgcgaggcagcgcaaggcaattacgccgacgccatg 360
Query: 391 gaggccttagaggccgccccggtcgcgggttccgagcacctggtggcgtggatgaaggcg 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaggccttagaggccgccccggtcgcgggttccgagcacctggtggcgtggatgaaggcg 420
Query: 451 gttgtctacggcgcggccgaacgctggaccgacgtgatcgaccaggtcaagagtgctggg 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gttgtctacggcgcggccgaacgctggaccgacgtgatcgaccaggtcaagagtgctggg 480
Query: 511 aaatggccggacaagtttttggccggcgcggccggtgtggcgcacggggttgccgcggca 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaatggccggacaagtttttggccggcgcggccggtgtggcgcacggggttgccgcggca 540
Query: 571 aacctggccttgttcaccgaagccgaacgccgactcaccgaggccaacgactcgcccgcc 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aacctggccttgttcaccgaagccgaacgccgactcaccgaggccaacgactcgcccgcc 600
Query: 631 ggtgaggcgtgtgcgcgcgccatcgcctggtatctggcgatggcacggcgcagccagggc 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ggtgaggcgtgtgcgcgcgccatcgcctggtatctggcgatggcacggcgcagccagggc 660
Query: 691 aacgaaagcgccgcggtggcgctgctggaatggttacagaccactcaccccgagcccaaa 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aacgaaagcgccgcggtggcgctgctggaatggttacagaccactcaccccgagcccaaa 720
Query: 751 gtggctgcggcgctgaaggatccctcctaccggctgaagacgaccaccgccgaacagatc 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtggctgcggcgctgaaggatccctcctaccggctgaagacgaccaccgccgaacagatc 780
Query: 811 gcatcccgcgccgatccctgggatccgggcagtgtcgtgaccgacaactccggccgggag 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gcatcccgcgccgatccctgggatccgggcagtgtcgtgaccgacaactccggccgggag 840
Query: 871 cggctgctcgccgaggcccaagccgaactcgaccgccaaattgggctcacccgggttaaa 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 cggctgctcgccgaggcccaagccgaactcgaccgccaaattgggctcacccgggttaaa 900
Query: 931 aatcagattgaacgctaccgcgcggcgacgctgatggcccgggtccgcgccgccaagggt 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 aatcagattgaacgctaccgcgcggcgacgctgatggcccgggtccgcgccgccaagggt 960
Query: 991 atgaaggtcgcccagcccagcaagcacatgatcttcaccggaccgcccggtaccggcaag 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 atgaaggtcgcccagcccagcaagcacatgatcttcaccggaccgcccggtaccggcaag 1020
Query: 1051 accacgatcgcgcgggtggtggccaatatcctggccggcttaggcgtcattgccgaaccc 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 accacgatcgcgcgggtggtggccaatatcctggccggcttaggcgtcattgccgaaccc 1080
Query: 1111 aaactcgtcgagacgtcgcgcaaggacttcgtcgccgagtacgaggggcaatcggcggtc 1170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 aaactcgtcgagacgtcgcgcaaggacttcgtcgccgagtacgaggggcaatcggcggtc 1140
Query: 1171 aagaccgctaagacgatcgatcaggcgctgggcggggtgcttttcatcgacgaggcttat 1230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 aagaccgctaagacgatcgatcaggcgctgggcggggtgcttttcatcgacgaggcttat 1200
Query: 1231 gcgctggtgcaggaaagagacggccgcaccgatccgttcggtcaagaggcgctggacacg 1290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 gcgctggtgcaggaaagagacggccgcaccgatccgttcggtcaagaggcgctggacacg 1260
Query: 1291 ctgctggcgcggatggagaacgaccgggaccggctggtggtgatcatcgccgggtacagc 1350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 ctgctggcgcggatggagaacgaccgggaccggctggtggtgatcatcgccgggtacagc 1320
Query: 1351 tccgacatagatcggctgctggaaaccaacgagggtctgcggtcgcggttcgccactcgc 1410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 tccgacatagatcggctgctggaaaccaacgagggtctgcggtcgcggttcgccactcgc 1380
Query: 1411 atcgagttcgacacctattcccccgaggaactcctcgagatcgccaacgtcattgccgct 1470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 atcgagttcgacacctattcccccgaggaactcctcgagatcgccaacgtcattgccgct 1440
Query: 1471 gctgatgattcggcgttgaccgcagaggcggccgagaactttcttcaggccgccaagcag 1530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 gctgatgattcggcgttgaccgcagaggcggccgagaactttcttcaggccgccaagcag 1500
Query: 1531 ttggagcagcgcatgttgcgcggccggcgcgccctggacgtcgccggcaacggtcggtat 1590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 ttggagcagcgcatgttgcgcggccggcgcgccctggacgtcgccggcaacggtcggtat 1560
Query: 1591 gcgcgccagctggtggaggccagcgagcaatgccgggacatgcgtctagcccaggtcctc 1650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 gcgcgccagctggtggaggccagcgagcaatgccgggacatgcgtctagcccaggtcctc 1620
Query: 1651 gatatcgacaccctcgacgaagaccggcttcgcgagatcaacggctcagatatggcggag 1710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 gatatcgacaccctcgacgaagaccggcttcgcgagatcaacggctcagatatggcggag 1680
Query: 1711 gctatcgccgcggtgcacgcacacctcaacatgagagaatga 1752
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 gctatcgccgcggtgcacgcacacctcaacatgagagaatga 1722
>lcl|NC_000962.2_cdsid_NP_218384.1 [gene=Rv3867]
[protein=hypothetical protein] [protein_id=NP_218384.1]
[location=4342770..4343321]
Length = 552
Score = 75.8 bits (38), Expect = 1e-13
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 1 atgtcgactacacctcccggtacaaggccgatgactga 38
||||||||||||||||||||||||||||||||||||||
Sbjct: 515 atgtcgactacacctcccggtacaaggccgatgactga 552
>lcl|NC_000962.2_cdsid_NP_214796.1 [gene=Rv0282] [protein=hypothetical
protein] [protein_id=NP_214796.1]
[location=342130..344025]
Length = 1896
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 1301 ggatggagaacgaccgggaccggctggtggtgatcatcgccgg 1343
||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 1418 ggatggaaaacgaccgcgaccggctggtggtcatcatcgccgg 1460
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1030 ggaccgcccggtaccggcaagaccacgatcgcgcgggtggtggccaa 1076
||||||||||| |||||||||||||| || || |||||||| |||||
Sbjct: 1153 ggaccgcccgggaccggcaagaccaccattgcccgggtggtcgccaa 1199
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00293 178307 179749 len=1443
(1443 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218386.1 [gene=Rv3869] [protein=hypothe... 2861 0.0
>lcl|NC_000962.2_cdsid_NP_218386.1 [gene=Rv3869] [protein=hypothetical
protein] [protein_id=NP_218386.1]
[location=4345039..4346481]
Length = 1443
Score = 2861 bits (1443), Expect = 0.0
Identities = 1443/1443 (100%)
Strand = Plus / Plus
Query: 1 atggggcttcgcctcaccaccaaggttcaggttagcggctggcgttttctgctgcgccgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggggcttcgcctcaccaccaaggttcaggttagcggctggcgttttctgctgcgccgg 60
Query: 61 ctcgaacacgccatcgtgcgccgggacacccggatgtttgacgacccgctgcagttctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctcgaacacgccatcgtgcgccgggacacccggatgtttgacgacccgctgcagttctac 120
Query: 121 agccgctcgatcgctcttggcatcgtcgtcgcggtcctgattctggcgggtgccgcgctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agccgctcgatcgctcttggcatcgtcgtcgcggtcctgattctggcgggtgccgcgctg 180
Query: 181 ctggcgtacttcaaaccacaaggcaaactcggcggcaccagcctgttcaccgaccgcgcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctggcgtacttcaaaccacaaggcaaactcggcggcaccagcctgttcaccgaccgcgcg 240
Query: 241 accaaccagctttacgtgctgctgtccggacagttgcatccggtctacaacctgacttcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 accaaccagctttacgtgctgctgtccggacagttgcatccggtctacaacctgacttcg 300
Query: 301 gcgcggctggtgctgggcaatccggccaacccggccaccgtgaagtcctccgaactgagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcgcggctggtgctgggcaatccggccaacccggccaccgtgaagtcctccgaactgagc 360
Query: 361 aagctgccgatgggccagaccgttggaatccccggcgccccctacgccacgcctgtttcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aagctgccgatgggccagaccgttggaatccccggcgccccctacgccacgcctgtttcg 420
Query: 421 gcgggcagcacctcgatctggaccctatgcgacaccgtcgcccgagccgactccacttcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcgggcagcacctcgatctggaccctatgcgacaccgtcgcccgagccgactccacttcc 480
Query: 481 ccggtagtgcagaccgcggtcatcgcgatgccgttggagatcgatgcttcgatcgatccg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccggtagtgcagaccgcggtcatcgcgatgccgttggagatcgatgcttcgatcgatccg 540
Query: 541 ctccagtcacacgaagcggtgctggtgtcctaccagggcgaaacctggatcgtcacaact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctccagtcacacgaagcggtgctggtgtcctaccagggcgaaacctggatcgtcacaact 600
Query: 601 aagggacgccacgccatagatctgaccgaccgcgccctcacctcgtcgatggggataccg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aagggacgccacgccatagatctgaccgaccgcgccctcacctcgtcgatggggataccg 660
Query: 661 gtgacggccaggccaaccccgatctcggagggcatgttcaacgcgctgcctgatatgggg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gtgacggccaggccaaccccgatctcggagggcatgttcaacgcgctgcctgatatgggg 720
Query: 721 ccctggcagctgccgccgataccggcggcgggcgcgcccaattcgcttggcctacctgat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccctggcagctgccgccgataccggcggcgggcgcgcccaattcgcttggcctacctgat 780
Query: 781 gatctagtgatcggatcggtcttccagatccacaccgacaagggcccgcaatactatgtg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gatctagtgatcggatcggtcttccagatccacaccgacaagggcccgcaatactatgtg 840
Query: 841 gtgctgcccgacggcatcgcgcaggtcaacgcgacaaccgctgcggcgctgcgcgccacc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gtgctgcccgacggcatcgcgcaggtcaacgcgacaaccgctgcggcgctgcgcgccacc 900
Query: 901 caggcgcacgggctggtcgcgccaccggcaatggtgcccagtctggtcgtcagaatcgcc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 caggcgcacgggctggtcgcgccaccggcaatggtgcccagtctggtcgtcagaatcgcc 960
Query: 961 gaacgggtatacccctcaccgctacccgatgaaccgctcaagatcgtgtcccggccgcag 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gaacgggtatacccctcaccgctacccgatgaaccgctcaagatcgtgtcccggccgcag 1020
Query: 1021 gatcccgcgctgtgctggtcatggcaacgcagcgccggcgaccagtcgccgcagtcaacg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gatcccgcgctgtgctggtcatggcaacgcagcgccggcgaccagtcgccgcagtcaacg 1080
Query: 1081 gtgctgtccggccggcatctgccgatatcgccctcagcgatgaacatggggatcaagcag 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gtgctgtccggccggcatctgccgatatcgccctcagcgatgaacatggggatcaagcag 1140
Query: 1141 atccacgggacggcgaccgtttacctcgacggcggaaaattcgtggcactgcaatccccc 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 atccacgggacggcgaccgtttacctcgacggcggaaaattcgtggcactgcaatccccc 1200
Query: 1201 gatcctcgatacaccgaatcgatgtactacatcgatccacagggcgtgcgttatggggtg 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 gatcctcgatacaccgaatcgatgtactacatcgatccacagggcgtgcgttatggggtg 1260
Query: 1261 cctaacgcggagacagccaagtcgctgggcctgagttcaccccaaaacgcgccctgggag 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 cctaacgcggagacagccaagtcgctgggcctgagttcaccccaaaacgcgccctgggag 1320
Query: 1321 atcgttcgtctcctggtcgacggtccggtgctgtcgaaagatgccgcactgctcgagcac 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 atcgttcgtctcctggtcgacggtccggtgctgtcgaaagatgccgcactgctcgagcac 1380
Query: 1381 gacacgctgcccgctgaccctagcccccgaaaagttcccgccggagcctccggagccccc 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 gacacgctgcccgctgaccctagcccccgaaaagttcccgccggagcctccggagccccc 1440
Query: 1441 tga 1443
|||
Sbjct: 1441 tga 1443
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00296 179749 181992 len=2244
(2244 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218387.1 [gene=Rv3870] [protein=transme... 4448 0.0
>lcl|NC_000962.2_cdsid_NP_218387.1 [gene=Rv3870]
[protein=transmembrane protein] [protein_id=NP_218387.1]
[location=4346481..4348724]
Length = 2244
Score = 4448 bits (2244), Expect = 0.0
Identities = 2244/2244 (100%)
Strand = Plus / Plus
Query: 1 atgacgaccaagaagttcactcccaccattacccgtggcccccggttgaccccgggcgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgacgaccaagaagttcactcccaccattacccgtggcccccggttgaccccgggcgag 60
Query: 61 atcagcctcacgccgcccgatgacctgggcatcgacatcccaccgtcgggcgtccaaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcagcctcacgccgcccgatgacctgggcatcgacatcccaccgtcgggcgtccaaaag 120
Query: 121 atccttccctacgtgatgggtggcgccatgctcggcatgatcgccatcatggtggccggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atccttccctacgtgatgggtggcgccatgctcggcatgatcgccatcatggtggccggc 180
Query: 181 ggcaccaggcagctgtcgccgtacatgttgatgatgccgctgatgatgatcgtgatgatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcaccaggcagctgtcgccgtacatgttgatgatgccgctgatgatgatcgtgatgatg 240
Query: 241 gtcggcggtctggccggtagcaccggtggtggcggcaagaaggtgcccgaaatcaacgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtcggcggtctggccggtagcaccggtggtggcggcaagaaggtgcccgaaatcaacgcc 300
Query: 301 gaccgcaaggagtacctgcggtatttggcaggactacgcacccgagtgacgtcctcggcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaccgcaaggagtacctgcggtatttggcaggactacgcacccgagtgacgtcctcggcc 360
Query: 361 acctctcaggtggcgttcttctcctaccacgcaccgcatcccgaggatctgttgtcgatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acctctcaggtggcgttcttctcctaccacgcaccgcatcccgaggatctgttgtcgatc 420
Query: 421 gtcggcacccaacggcagtggtcccggccggccaacgccgacttctatgcggccacccga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtcggcacccaacggcagtggtcccggccggccaacgccgacttctatgcggccacccga 480
Query: 481 atcggtatcggtgaccagccggcggtggatcgattattgaagccggccgtcggcggggag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atcggtatcggtgaccagccggcggtggatcgattattgaagccggccgtcggcggggag 540
Query: 541 ttggccgccgccagcgcagcacctcagccgttcctggagccggtcagtcatatgtgggtg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttggccgccgccagcgcagcacctcagccgttcctggagccggtcagtcatatgtgggtg 600
Query: 601 gtcaagtttctacgaacccatggattgatccatgactgcccgaaactgctgcaactccgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtcaagtttctacgaacccatggattgatccatgactgcccgaaactgctgcaactccgt 660
Query: 661 acctttccgactatcgcgatcggcggggacttggcgggggcagccggcctgatgacggcg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 acctttccgactatcgcgatcggcggggacttggcgggggcagccggcctgatgacggcg 720
Query: 721 atgatctgtcacctagccgtgttccacccaccggacctgctgcagatccgggtgctcacc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 atgatctgtcacctagccgtgttccacccaccggacctgctgcagatccgggtgctcacc 780
Query: 781 gaggaacccgacgaccccgactggtcctggctcaaatggcttccgcacgtacagcaccag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gaggaacccgacgaccccgactggtcctggctcaaatggcttccgcacgtacagcaccag 840
Query: 841 accgaaaccgatgcggccgggtccacccggctgatcttcacgcgccaggaaggtctgtcg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 accgaaaccgatgcggccgggtccacccggctgatcttcacgcgccaggaaggtctgtcg 900
Query: 901 gacctggccgcgcgcgggccacacgcacccgattcgcttcccggcggcccctacgtagtc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gacctggccgcgcgcgggccacacgcacccgattcgcttcccggcggcccctacgtagtc 960
Query: 961 gtcgtcgacctgaccggcggcaaggctggattcccgcccgacggtagggccggtgtcacg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gtcgtcgacctgaccggcggcaaggctggattcccgcccgacggtagggccggtgtcacg 1020
Query: 1021 gtgatcacgttgggcaaccatcgcggctcggcctaccgcatcagggtgcacgaggatggg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gtgatcacgttgggcaaccatcgcggctcggcctaccgcatcagggtgcacgaggatggg 1080
Query: 1081 acggctgatgaccggctccctaaccaatcgtttcgccaggtgacatcggtcaccgatcgg 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 acggctgatgaccggctccctaaccaatcgtttcgccaggtgacatcggtcaccgatcgg 1140
Query: 1141 atgtcgccgcagcaagccagccgtatcgcgcgaaagttggccggatggtccatcacgggc 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 atgtcgccgcagcaagccagccgtatcgcgcgaaagttggccggatggtccatcacgggc 1200
Query: 1201 accatcctcgacaagacgtcgcgggtccagaagaaggtggccaccgactggcaccagctg 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 accatcctcgacaagacgtcgcgggtccagaagaaggtggccaccgactggcaccagctg 1260
Query: 1261 gtcggtgcgcaaagtgtcgaggagataacaccttcccgctggaggatgtacaccgacacc 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 gtcggtgcgcaaagtgtcgaggagataacaccttcccgctggaggatgtacaccgacacc 1320
Query: 1321 gaccgtgaccggctaaagatcccgtttggtcatgaactaaagaccggcaacgtcatgtac 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 gaccgtgaccggctaaagatcccgtttggtcatgaactaaagaccggcaacgtcatgtac 1380
Query: 1381 ctggacatcaaagagggcgcggaattcggcgccggaccgcacggcatgctcatcgggacc 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 ctggacatcaaagagggcgcggaattcggcgccggaccgcacggcatgctcatcgggacc 1440
Query: 1441 acggggtctgggaagtccgaattcctgcgcaccctgatcctgtcgctggtggcaatgact 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 acggggtctgggaagtccgaattcctgcgcaccctgatcctgtcgctggtggcaatgact 1500
Query: 1501 catccagatcaggtgaatctcctgctcaccgacttcaaaggtggttcaaccttcctggga 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 catccagatcaggtgaatctcctgctcaccgacttcaaaggtggttcaaccttcctggga 1560
Query: 1561 atggaaaagcttccgcacactgccgctgtcgtcaccaacatggccgaggaagccgagctc 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 atggaaaagcttccgcacactgccgctgtcgtcaccaacatggccgaggaagccgagctc 1620
Query: 1621 gtcagccggatgggcgaggtgttgaccggagaactcgatcggcgccagtcgatcctccga 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 gtcagccggatgggcgaggtgttgaccggagaactcgatcggcgccagtcgatcctccga 1680
Query: 1681 caggccgggatgaaagtcggcgcggccggagccctgtccggcgtggccgaatacgagaag 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 caggccgggatgaaagtcggcgcggccggagccctgtccggcgtggccgaatacgagaag 1740
Query: 1741 taccgcgaacgcggtgccgacctacccccgctgccaacgcttttcgtcgtcgtcgacgag 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 taccgcgaacgcggtgccgacctacccccgctgccaacgcttttcgtcgtcgtcgacgag 1800
Query: 1801 ttcgccgagctgttgcagagtcacccggacttcatcgggctgttcgaccggatctgccgc 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 ttcgccgagctgttgcagagtcacccggacttcatcgggctgttcgaccggatctgccgc 1860
Query: 1861 gtcgggcggtcgctgagggtccatctgctgctggctacccagtcgctgcagaccggcggt 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 gtcgggcggtcgctgagggtccatctgctgctggctacccagtcgctgcagaccggcggt 1920
Query: 1921 gttcgcatcgacaaactggagccaaacctgacatatcgaatcgcattgcgcaccaccagc 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 gttcgcatcgacaaactggagccaaacctgacatatcgaatcgcattgcgcaccaccagc 1980
Query: 1981 tctcatgaatccaaggcggtaatcggcacaccggaggcgcagtacatcaccaacaaggag 2040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1981 tctcatgaatccaaggcggtaatcggcacaccggaggcgcagtacatcaccaacaaggag 2040
Query: 2041 agcggtgtcgggtttctccgggtcggcatggaagacccggtcaagttcagcaccttctac 2100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2041 agcggtgtcgggtttctccgggtcggcatggaagacccggtcaagttcagcaccttctac 2100
Query: 2101 atcagtgggccatacatgccgccggcggcaggcgtcgaaaccaatggtgaagccggaggg 2160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2101 atcagtgggccatacatgccgccggcggcaggcgtcgaaaccaatggtgaagccggaggg 2160
Query: 2161 cccggtcaacagaccactagacaagccgcgcgcattcacaggttcaccgcggcaccggtt 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2161 cccggtcaacagaccactagacaagccgcgcgcattcacaggttcaccgcggcaccggtt 2220
Query: 2221 ctcgaggaggcgccgacaccgtga 2244
||||||||||||||||||||||||
Sbjct: 2221 ctcgaggaggcgccgacaccgtga 2244
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00302 182095 183870 len=1776
(1776 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218388.1 [gene=Rv3871] [protein=hypothe... 3521 0.0
>lcl|NC_000962.2_cdsid_NP_218388.1 [gene=Rv3871] [protein=hypothetical
protein] [protein_id=NP_218388.1]
[location=4348827..4350602]
Length = 1776
Score = 3521 bits (1776), Expect = 0.0
Identities = 1776/1776 (100%)
Strand = Plus / Plus
Query: 1 atgactgctgaaccggaagtacggacgctgcgcgaggttgtgctggaccagctcggcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgactgctgaaccggaagtacggacgctgcgcgaggttgtgctggaccagctcggcact 60
Query: 61 gctgaatcgcgtgcgtacaagatgtggctgccgccgttgaccaatccggtcccgctcaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gctgaatcgcgtgcgtacaagatgtggctgccgccgttgaccaatccggtcccgctcaac 120
Query: 121 gagctcatcgcccgtgatcggcgacaacccctgcgatttgccctggggatcatggatgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagctcatcgcccgtgatcggcgacaacccctgcgatttgccctggggatcatggatgaa 180
Query: 181 ccgcgccgccatctacaggatgtgtggggcgtagacgtttccggggccggcggcaacatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccgcgccgccatctacaggatgtgtggggcgtagacgtttccggggccggcggcaacatc 240
Query: 241 ggtattgggggcgcacctcaaaccgggaagtcgacgctactgcagacgatggtgatgtcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggtattgggggcgcacctcaaaccgggaagtcgacgctactgcagacgatggtgatgtcg 300
Query: 301 gccgccgccacacactcaccgcgcaacgttcagttctattgcatcgacctaggtggcggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gccgccgccacacactcaccgcgcaacgttcagttctattgcatcgacctaggtggcggc 360
Query: 361 gggctgatctatctcgaaaaccttccacacgtcggtggggtagccaatcggtccgagccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gggctgatctatctcgaaaaccttccacacgtcggtggggtagccaatcggtccgagccc 420
Query: 421 gacaaggtcaaccgggtggtcgcagagatgcaagccgtcatgcggcaacgggaaaccacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gacaaggtcaaccgggtggtcgcagagatgcaagccgtcatgcggcaacgggaaaccacc 480
Query: 481 ttcaaggaacaccgagtgggctcgatcgggatgtaccggcagctgcgtgacgatccaagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttcaaggaacaccgagtgggctcgatcgggatgtaccggcagctgcgtgacgatccaagt 540
Query: 541 caacccgttgcgtccgatccatacggcgacgtctttctgatcatcgacggatggcccggt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 caacccgttgcgtccgatccatacggcgacgtctttctgatcatcgacggatggcccggt 600
Query: 601 tttgtcggcgagttccccgaccttgaggggcaggttcaagatctggccgcccaggggctg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tttgtcggcgagttccccgaccttgaggggcaggttcaagatctggccgcccaggggctg 660
Query: 661 gcgttcggcgtccacgtcatcatctccacgccacgctggacagagctgaagtcgcgtgtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gcgttcggcgtccacgtcatcatctccacgccacgctggacagagctgaagtcgcgtgtt 720
Query: 721 cgcgactacctcggcaccaagatcgagttccggcttggtgacgtcaatgaaacccagatc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cgcgactacctcggcaccaagatcgagttccggcttggtgacgtcaatgaaacccagatc 780
Query: 781 gaccggattacccgcgagatcccggcgaatcgtccgggtcgggcagtgtcgatggaaaag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gaccggattacccgcgagatcccggcgaatcgtccgggtcgggcagtgtcgatggaaaag 840
Query: 841 caccatctgatgatcggcgtgcccaggttcgacggcgtgcacagcgccgataacctggtg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 caccatctgatgatcggcgtgcccaggttcgacggcgtgcacagcgccgataacctggtg 900
Query: 901 gaggcgatcaccgcgggggtgacgcagatcgcttcccagcacaccgaacaggcacctccg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gaggcgatcaccgcgggggtgacgcagatcgcttcccagcacaccgaacaggcacctccg 960
Query: 961 gtgcgggtcctgccggagcgtatccacctgcacgaactcgacccgaacccgccgggacca 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gtgcgggtcctgccggagcgtatccacctgcacgaactcgacccgaacccgccgggacca 1020
Query: 1021 gagtccgactaccgcactcgctgggagattccgatcggcttgcgcgagacggacctgacg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gagtccgactaccgcactcgctgggagattccgatcggcttgcgcgagacggacctgacg 1080
Query: 1081 ccggctcactgccacatgcacacgaacccgcacctactgatcttcggtgcggccaaatcg 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ccggctcactgccacatgcacacgaacccgcacctactgatcttcggtgcggccaaatcg 1140
Query: 1141 ggcaagacgaccattgcccacgcgatcgcgcgcgccatttgtgcccgaaacagtccccag 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 ggcaagacgaccattgcccacgcgatcgcgcgcgccatttgtgcccgaaacagtccccag 1200
Query: 1201 caggtgcggttcatgctcgcggactaccgctcgggcctgctggacgcggtgccggacacc 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 caggtgcggttcatgctcgcggactaccgctcgggcctgctggacgcggtgccggacacc 1260
Query: 1261 catctgctgggcgccggcgcgatcaaccgcaacagcgcgtcgctagacgaggccgttcaa 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 catctgctgggcgccggcgcgatcaaccgcaacagcgcgtcgctagacgaggccgttcaa 1320
Query: 1321 gcactggcggtcaacctgaagaagcggttgccgccgaccgacctgacgacggcgcagcta 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 gcactggcggtcaacctgaagaagcggttgccgccgaccgacctgacgacggcgcagcta 1380
Query: 1381 cgctcgcgttcgtggtggagcggatttgacgtcgtgcttctggtcgacgattggcacatg 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 cgctcgcgttcgtggtggagcggatttgacgtcgtgcttctggtcgacgattggcacatg 1440
Query: 1441 atcgtgggtgccgccggggggatgccgccgatggcaccgctggccccgttattgccggcg 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 atcgtgggtgccgccggggggatgccgccgatggcaccgctggccccgttattgccggcg 1500
Query: 1501 gcggcagatatcgggttgcacatcattgtcacctgtcagatgagccaggcttacaaggca 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 gcggcagatatcgggttgcacatcattgtcacctgtcagatgagccaggcttacaaggca 1560
Query: 1561 accatggacaagttcgtcggcgccgcattcgggtcgggcgctccgacaatgttcctttcg 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 accatggacaagttcgtcggcgccgcattcgggtcgggcgctccgacaatgttcctttcg 1620
Query: 1621 ggcgagaagcaggaattcccatccagtgagttcaaggtcaagcggcgcccccctggccag 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 ggcgagaagcaggaattcccatccagtgagttcaaggtcaagcggcgcccccctggccag 1680
Query: 1681 gcatttctcgtctcgccagacggcaaagaggtcatccaggccccctacatcgagcctcca 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 gcatttctcgtctcgccagacggcaaagaggtcatccaggccccctacatcgagcctcca 1740
Query: 1741 gaagaagtgttcgcagcacccccaagcgccggttaa 1776
||||||||||||||||||||||||||||||||||||
Sbjct: 1741 gaagaagtgttcgcagcacccccaagcgccggttaa 1776
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00303 184728 184462 len=267
(267 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_YP_178022.1 [gene=PPE68] [protein=PPE fami... 529 e-151
>lcl|NC_000962.2_cdsid_YP_178022.1 [gene=PPE68] [protein=PPE family
protein] [protein_id=YP_178022.1]
[location=4351075..4352181]
Length = 1107
Score = 529 bits (267), Expect = e-151
Identities = 267/267 (100%)
Strand = Plus / Minus
Query: 1 gtgttgataccgaagaagttggtggccgtaaggacggcctgggtgatgtggttggcggcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gtgttgataccgaagaagttggtggccgtaaggacggcctgggtgatgtggttggcggcg 327
Query: 61 atctccggcagcgacggcgtcgtggccatggcctgggtgtatgccgcggcttgcgccgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 atctccggcagcgacggcgtcgtggccatggcctgggtgtatgccgcggcttgcgccgtc 267
Query: 121 gcctgcatcgcacgggtcttggcctgtgttgacgcggtttgtagccagaccaccatcggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gcctgcatcgcacgggtcttggcctgtgttgacgcggtttgtagccagaccaccatcggc 207
Query: 181 gttgcagccgcaagcgccttgtcgctgccacctccagtccaggcttctcccagagagttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gttgcagccgcaagcgccttgtcgctgccacctccagtccaggcttctcccagagagttc 147
Query: 241 aggcgcgcggtcaactcgacggcctga 267
|||||||||||||||||||||||||||
Sbjct: 146 aggcgcgcggtcaactcgacggcctga 120
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00305 185131 184925 len=207
(207 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_YP_178022.1 [gene=PPE68] [protein=PPE fami... 410 e-115
>lcl|NC_000962.2_cdsid_YP_178022.1 [gene=PPE68] [protein=PPE family
protein] [protein_id=YP_178022.1]
[location=4351075..4352181]
Length = 1107
Score = 410 bits (207), Expect = e-115
Identities = 207/207 (100%)
Strand = Plus / Minus
Query: 1 atggttcgacagcggactggtgccgagcaggcccatctgcgcggcttcctcgtcggctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 atggttcgacagcggactggtgccgagcaggcccatctgcgcggcttcctcgtcggctgg 730
Query: 61 gttgccgccgccggtgccgcccacctggctgaacaacgacgtcacctgctgcagcggctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 gttgccgccgccggtgccgcccacctggctgaacaacgacgtcacctgctgcagcggctg 670
Query: 121 ggtcagctgctgcatcgggccgctcatctcacccagttggccgagggtctgggtagccgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 ggtcagctgctgcatcgggccgctcatctcacccagttggccgagggtctgggtagccgc 610
Query: 181 cggcggcaactggccaaccggtgttga 207
|||||||||||||||||||||||||||
Sbjct: 609 cggcggcaactggccaaccggtgttga 583
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00306 185267 185449 len=183
(183 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_YP_178022.1 [gene=PPE68] [protein=PPE fami... 363 e-101
>lcl|NC_000962.2_cdsid_YP_178022.1 [gene=PPE68] [protein=PPE family
protein] [protein_id=YP_178022.1]
[location=4351075..4352181]
Length = 1107
Score = 363 bits (183), Expect = e-101
Identities = 183/183 (100%)
Strand = Plus / Plus
Query: 1 atgccggcggctgctgccggatcgtcggcgacgggtggcgccgctccggtgggtgcggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 925 atgccggcggctgctgccggatcgtcggcgacgggtggcgccgctccggtgggtgcggga 984
Query: 61 gcgatgggccagggtgcgcaatccggcggctccaccaggccgggtctggtcgcgccggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 985 gcgatgggccagggtgcgcaatccggcggctccaccaggccgggtctggtcgcgccggca 1044
Query: 121 ccgctcgcgcaggagcgtgaagaagacgacgaggacgactgggacgaagaggacgactgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1045 ccgctcgcgcaggagcgtgaagaagacgacgaggacgactgggacgaagaggacgactgg 1104
Query: 181 tga 183
|||
Sbjct: 1105 tga 1107
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00310 186278 188278 len=2001
(2001 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218393.1 [gene=Rv3876] [protein=hypothe... 3967 0.0
>lcl|NC_000962.2_cdsid_NP_218393.1 [gene=Rv3876] [protein=hypothetical
protein] [protein_id=NP_218393.1]
[location=4353010..4355010]
Length = 2001
Score = 3967 bits (2001), Expect = 0.0
Identities = 2001/2001 (100%)
Strand = Plus / Plus
Query: 1 atggcggccgactacgacaagctcttccggccgcacgaaggtatggaagctccggacgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggcggccgactacgacaagctcttccggccgcacgaaggtatggaagctccggacgat 60
Query: 61 atggcagcgcagccgttcttcgaccccagtgcttcgtttccgccggcgcccgcatcggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atggcagcgcagccgttcttcgaccccagtgcttcgtttccgccggcgcccgcatcggca 120
Query: 121 aacctaccgaagcccaacggccagactccgcccccgacgtccgacgacctgtcggagcgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aacctaccgaagcccaacggccagactccgcccccgacgtccgacgacctgtcggagcgg 180
Query: 181 ttcgtgtcggccccgccgccgccacccccacccccacctccgcctccgccaactccgatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttcgtgtcggccccgccgccgccacccccacccccacctccgcctccgccaactccgatg 240
Query: 241 ccgatcgccgcaggagagccgccctcgccggaaccggccgcatctaaaccacccacaccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccgatcgccgcaggagagccgccctcgccggaaccggccgcatctaaaccacccacaccc 300
Query: 301 cccatgcccatcgccggacccgaaccggccccacccaaaccacccacaccccccatgccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cccatgcccatcgccggacccgaaccggccccacccaaaccacccacaccccccatgccc 360
Query: 361 atcgccggacccgaaccggccccacccaaaccacccacacctccgatgcccatcgccgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atcgccggacccgaaccggccccacccaaaccacccacacctccgatgcccatcgccgga 420
Query: 421 cctgcacccaccccaaccgaatcccagttggcgccccccagaccaccgacaccacaaacg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cctgcacccaccccaaccgaatcccagttggcgccccccagaccaccgacaccacaaacg 480
Query: 481 ccaaccggagcgccgcagcaaccggaatcaccggcgccccacgtaccctcgcacgggcca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccaaccggagcgccgcagcaaccggaatcaccggcgccccacgtaccctcgcacgggcca 540
Query: 541 catcaaccccggcgcaccgcaccagcaccgccctgggcaaagatgccaatcggcgaaccc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 catcaaccccggcgcaccgcaccagcaccgccctgggcaaagatgccaatcggcgaaccc 600
Query: 601 ccgcccgctccgtccagaccgtctgcgtccccggccgaaccaccgacccggcctgccccc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ccgcccgctccgtccagaccgtctgcgtccccggccgaaccaccgacccggcctgccccc 660
Query: 661 caacactcccgacgtgcgcgccggggtcaccgctatcgcacagacaccgaacgaaacgtc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 caacactcccgacgtgcgcgccggggtcaccgctatcgcacagacaccgaacgaaacgtc 720
Query: 721 gggaaggtagcaactggtccatccatccaggcgcggctgcgggcagaggaagcatccggc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gggaaggtagcaactggtccatccatccaggcgcggctgcgggcagaggaagcatccggc 780
Query: 781 gcgcagctcgcccccggaacggagccctcgccagcgccgttgggccaaccgagatcgtat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gcgcagctcgcccccggaacggagccctcgccagcgccgttgggccaaccgagatcgtat 840
Query: 841 ctggctccgcccacccgccccgcgccgacagaacctccccccagcccctcgccgcagcgc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ctggctccgcccacccgccccgcgccgacagaacctccccccagcccctcgccgcagcgc 900
Query: 901 aactccggtcggcgtgccgagcgacgcgtccaccccgatttagccgcccaacatgccgcg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 aactccggtcggcgtgccgagcgacgcgtccaccccgatttagccgcccaacatgccgcg 960
Query: 961 gcgcaacctgattcaattacggccgcaaccactggcggtcgtcgccgcaagcgtgcagcg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gcgcaacctgattcaattacggccgcaaccactggcggtcgtcgccgcaagcgtgcagcg 1020
Query: 1021 ccggatctcgacgcgacacagaaatccttaaggccggcggccaaggggccgaaggtgaag 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 ccggatctcgacgcgacacagaaatccttaaggccggcggccaaggggccgaaggtgaag 1080
Query: 1081 aaggtgaagccccagaaaccgaaggccacgaagccgcccaaagtggtgtcgcagcgcggc 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 aaggtgaagccccagaaaccgaaggccacgaagccgcccaaagtggtgtcgcagcgcggc 1140
Query: 1141 tggcgacattgggtgcatgcgttgacgcgaatcaacctgggcctgtcacccgacgagaag 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 tggcgacattgggtgcatgcgttgacgcgaatcaacctgggcctgtcacccgacgagaag 1200
Query: 1201 tacgagctggacctgcacgctcgagtccgccgcaatccccgcgggtcgtatcagatcgcc 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 tacgagctggacctgcacgctcgagtccgccgcaatccccgcgggtcgtatcagatcgcc 1260
Query: 1261 gtcgtcggtctcaaaggtggggctggcaaaaccacgctgacagcagcgttggggtcgacg 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 gtcgtcggtctcaaaggtggggctggcaaaaccacgctgacagcagcgttggggtcgacg 1320
Query: 1321 ttggctcaggtgcgggccgaccggatcctggctctagacgcggatccaggcgccggaaac 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 ttggctcaggtgcgggccgaccggatcctggctctagacgcggatccaggcgccggaaac 1380
Query: 1381 ctcgccgatcgggtagggcgacaatcgggcgcgaccatcgctgatgtgcttgcagaaaaa 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 ctcgccgatcgggtagggcgacaatcgggcgcgaccatcgctgatgtgcttgcagaaaaa 1440
Query: 1441 gagctgtcgcactacaacgacatccgcgcacacactagcgtcaatgcggtcaatctggaa 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 gagctgtcgcactacaacgacatccgcgcacacactagcgtcaatgcggtcaatctggaa 1500
Query: 1501 gtgctgccggcaccggaatacagctcggcgcagcgcgcgctcagcgacgccgactggcat 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 gtgctgccggcaccggaatacagctcggcgcagcgcgcgctcagcgacgccgactggcat 1560
Query: 1561 ttcatcgccgatcctgcgtcgaggttttacaacctcgtcttggctgattgtggggccggc 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 ttcatcgccgatcctgcgtcgaggttttacaacctcgtcttggctgattgtggggccggc 1620
Query: 1621 ttcttcgacccgctgacccgcggcgtgctgtccacggtgtccggtgtcgtggtcgtggca 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 ttcttcgacccgctgacccgcggcgtgctgtccacggtgtccggtgtcgtggtcgtggca 1680
Query: 1681 agtgtctcaatcgacggcgcacaacaggcgtcggtcgcgttggactggttgcgcaacaac 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 agtgtctcaatcgacggcgcacaacaggcgtcggtcgcgttggactggttgcgcaacaac 1740
Query: 1741 ggttaccaagatttggcgagccgcgcatgcgtggtcatcaatcacatcatgccgggagaa 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 ggttaccaagatttggcgagccgcgcatgcgtggtcatcaatcacatcatgccgggagaa 1800
Query: 1801 cccaatgtcgcagttaaagacctggtgcggcatttcgaacagcaagttcaacccggccgg 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 cccaatgtcgcagttaaagacctggtgcggcatttcgaacagcaagttcaacccggccgg 1860
Query: 1861 gtcgtggtcatgccgtgggacaggcacattgcggccggaaccgagatttcactcgacttg 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 gtcgtggtcatgccgtgggacaggcacattgcggccggaaccgagatttcactcgacttg 1920
Query: 1921 ctcgaccctatctacaagcgcaaggtcctcgaattggccgcagcgctatccgacgatttc 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 ctcgaccctatctacaagcgcaaggtcctcgaattggccgcagcgctatccgacgatttc 1980
Query: 1981 gagagggctggacgtcgttga 2001
|||||||||||||||||||||
Sbjct: 1981 gagagggctggacgtcgttga 2001
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00312 188275 189810 len=1536
(1536 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218394.1 [gene=Rv3877] [protein=transme... 3045 0.0
>lcl|NC_000962.2_cdsid_NP_218394.1 [gene=Rv3877]
[protein=transmembrane protein] [protein_id=NP_218394.1]
[location=4355007..4356542]
Length = 1536
Score = 3045 bits (1536), Expect = 0.0
Identities = 1536/1536 (100%)
Strand = Plus / Plus
Query: 1 ttgagcgcacctgctgttgctgctggtcctaccgccgcgggggcaaccgctgcgcggcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgagcgcacctgctgttgctgctggtcctaccgccgcgggggcaaccgctgcgcggcct 60
Query: 61 gccaccacccgggtgacgatcctgaccggcagacggatgaccgatttggtactgccagcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gccaccacccgggtgacgatcctgaccggcagacggatgaccgatttggtactgccagcg 120
Query: 121 gcggtgccgatggaaacttatattgacgacaccgtcgcggtgctttccgaggtgttggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcggtgccgatggaaacttatattgacgacaccgtcgcggtgctttccgaggtgttggaa 180
Query: 181 gacacgccggctgatgtactcggcggcttcgactttaccgcgcaaggcgtgtgggcgttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gacacgccggctgatgtactcggcggcttcgactttaccgcgcaaggcgtgtgggcgttc 240
Query: 241 gctcgtcccggatcgccgccgctgaagctcgaccagtcactcgatgacgccggggtggtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gctcgtcccggatcgccgccgctgaagctcgaccagtcactcgatgacgccggggtggtc 300
Query: 301 gacgggtcactgctgactctggtgtcagtcagtcgcaccgagcgctaccgaccgttggtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gacgggtcactgctgactctggtgtcagtcagtcgcaccgagcgctaccgaccgttggtc 360
Query: 361 gaggatgtcatcgacgcgatcgccgtgcttgacgagtcacctgagttcgaccgcacggca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaggatgtcatcgacgcgatcgccgtgcttgacgagtcacctgagttcgaccgcacggca 420
Query: 421 ttgaatcgctttgtgggggcggcgatcccgcttttgaccgcgcccgtcatcgggatggcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttgaatcgctttgtgggggcggcgatcccgcttttgaccgcgcccgtcatcgggatggcg 480
Query: 481 atgcgggcgtggtgggaaactgggcgtagcttgtggtggccgttggcgattggcatcctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atgcgggcgtggtgggaaactgggcgtagcttgtggtggccgttggcgattggcatcctg 540
Query: 541 gggatcgctgtgctggtaggcagcttcgtcgcgaacaggttctaccagagcggccacctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gggatcgctgtgctggtaggcagcttcgtcgcgaacaggttctaccagagcggccacctg 600
Query: 601 gccgagtgcctactggtcacgacgtatctgctgatcgcaaccgccgcagcgctggccgtg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gccgagtgcctactggtcacgacgtatctgctgatcgcaaccgccgcagcgctggccgtg 660
Query: 661 ccgttgccgcgcggggtcaactcgttgggggcgccacaagttgccggcgccgctacggcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ccgttgccgcgcggggtcaactcgttgggggcgccacaagttgccggcgccgctacggcc 720
Query: 721 gtgctgtttttgaccttgatgacgcggggcggccctcggaagcgtcatgagttggcgtcg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtgctgtttttgaccttgatgacgcggggcggccctcggaagcgtcatgagttggcgtcg 780
Query: 781 tttgccgtgatcaccgctatcgcggtcatcgcggccgccgctgccttcggctatggatac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tttgccgtgatcaccgctatcgcggtcatcgcggccgccgctgccttcggctatggatac 840
Query: 841 caggactgggtccccgcgggggggatcgcattcgggctgttcattgtgacgaatgcggcc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 caggactgggtccccgcgggggggatcgcattcgggctgttcattgtgacgaatgcggcc 900
Query: 901 aagctgaccgtcgcggtcgcgcggatcgcgctgccgccgattccggtacccggcgaaacc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 aagctgaccgtcgcggtcgcgcggatcgcgctgccgccgattccggtacccggcgaaacc 960
Query: 961 gtggacaacgaggagttgctcgatcccgtcgcgaccccggaggctaccagcgaagaaacc 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gtggacaacgaggagttgctcgatcccgtcgcgaccccggaggctaccagcgaagaaacc 1020
Query: 1021 ccgacctggcaggccatcatcgcgtcggtgcccgcgtccgcggtccggctcaccgagcgc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 ccgacctggcaggccatcatcgcgtcggtgcccgcgtccgcggtccggctcaccgagcgc 1080
Query: 1081 agcaaactggccaagcaacttctgatcggatacgtcacgtcgggcaccctgattctggct 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 agcaaactggccaagcaacttctgatcggatacgtcacgtcgggcaccctgattctggct 1140
Query: 1141 gccggtgccatcgcggtcgtggtgcgcgggcacttctttgtacacagcctggtggtcgcg 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gccggtgccatcgcggtcgtggtgcgcgggcacttctttgtacacagcctggtggtcgcg 1200
Query: 1201 ggtttgatcacgaccgtctgcggatttcgctcgcggctttacgccgagcgctggtgtgcg 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ggtttgatcacgaccgtctgcggatttcgctcgcggctttacgccgagcgctggtgtgcg 1260
Query: 1261 tgggcgttgctggcggcgacggtcgcgattccgacgggtctgacggccaaactcatcatc 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 tgggcgttgctggcggcgacggtcgcgattccgacgggtctgacggccaaactcatcatc 1320
Query: 1321 tggtacccgcactatgcctggctgttgttgagcgtctacctcacggtagccctggttgcg 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 tggtacccgcactatgcctggctgttgttgagcgtctacctcacggtagccctggttgcg 1380
Query: 1381 ctcgtggtggtcgggtcgatggctcacgtccggcgcgtttcaccggtcgtaaaacgaact 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 ctcgtggtggtcgggtcgatggctcacgtccggcgcgtttcaccggtcgtaaaacgaact 1440
Query: 1441 ctggaattgatcgacggcgccatgatcgctgccatcattcccatgctgctgtggatcacc 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 ctggaattgatcgacggcgccatgatcgctgccatcattcccatgctgctgtggatcacc 1500
Query: 1501 ggggtgtacgacacggtccgcaatatccggttctga 1536
||||||||||||||||||||||||||||||||||||
Sbjct: 1501 ggggtgtacgacacggtccgcaatatccggttctga 1536
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00320 193050 190861 len=2190
(2190 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218396.1 [gene=Rv3879c] [protein=hypoth... 4341 0.0
>lcl|NC_000962.2_cdsid_NP_218396.1 [gene=Rv3879c]
[protein=hypothetical protein] [protein_id=NP_218396.1]
[location=complement(4357593..4359782)]
Length = 2190
Score = 4341 bits (2190), Expect = 0.0
Identities = 2190/2190 (100%)
Strand = Plus / Plus
Query: 1 atgagtattaccaggccgacgggcagctatgccagacagatgctggatccgggcggctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgagtattaccaggccgacgggcagctatgccagacagatgctggatccgggcggctgg 60
Query: 61 gtggaagccgatgaagacactttctatgaccgggcccaggaatatagccaggttttgcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtggaagccgatgaagacactttctatgaccgggcccaggaatatagccaggttttgcaa 120
Query: 121 agggtcaccgatgtattggacacctgccgccagcagaaaggccacgtcttcgaaggcggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agggtcaccgatgtattggacacctgccgccagcagaaaggccacgtcttcgaaggcggc 180
Query: 181 ctatggtccggcggcgccgccaatgctgccaacggcgccctgggtgcaaacatcaatcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctatggtccggcggcgccgccaatgctgccaacggcgccctgggtgcaaacatcaatcaa 240
Query: 241 ttgatgacgctgcaggattatctcgccacggtgattacctggcacaggcatattgccggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttgatgacgctgcaggattatctcgccacggtgattacctggcacaggcatattgccggg 300
Query: 301 ttgattgagcaagctaaatccgatatcggcaataatgtggatggcgctcaacgggagatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttgattgagcaagctaaatccgatatcggcaataatgtggatggcgctcaacgggagatc 360
Query: 361 gatatcctggagaatgaccctagcctggatgctgatgagcgccataccgccatcaattca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gatatcctggagaatgaccctagcctggatgctgatgagcgccataccgccatcaattca 420
Query: 421 ttggtcacggcgacgcatggggccaatgtcagtctggtcgccgagaccgctgagcgggtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttggtcacggcgacgcatggggccaatgtcagtctggtcgccgagaccgctgagcgggtg 480
Query: 481 ctggaatccaagaattggaaacctccgaagaacgcactcgaggatttgcttcagcagaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctggaatccaagaattggaaacctccgaagaacgcactcgaggatttgcttcagcagaag 540
Query: 541 tcgccgccacccccagacgtgcctaccctggtcgtgccatccccgggcacaccgggcaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tcgccgccacccccagacgtgcctaccctggtcgtgccatccccgggcacaccgggcaca 600
Query: 601 ccgggaaccccgatcaccccgggaaccccgatcaccccgggaaccccaatcacacccatc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ccgggaaccccgatcaccccgggaaccccgatcaccccgggaaccccaatcacacccatc 660
Query: 661 ccgggagcgccggtaactccgatcacaccaacgcccggcactcccgtcacgccggtgacc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ccgggagcgccggtaactccgatcacaccaacgcccggcactcccgtcacgccggtgacc 720
Query: 721 ccgggcaagccggtcaccccggtgaccccggtcaaaccgggcacaccaggcgagccaacc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccgggcaagccggtcaccccggtgaccccggtcaaaccgggcacaccaggcgagccaacc 780
Query: 781 ccgatcacgccggtcacccccccggtcgccccggccacaccggcaaccccggccacgccc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ccgatcacgccggtcacccccccggtcgccccggccacaccggcaaccccggccacgccc 840
Query: 841 gttaccccagctcccgctccacacccgcagccggctccggcaccggcgccatcgcctggg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gttaccccagctcccgctccacacccgcagccggctccggcaccggcgccatcgcctggg 900
Query: 901 ccccagccggttacaccggccactcccggtccgtctggtccagcaacaccgggcacccca 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ccccagccggttacaccggccactcccggtccgtctggtccagcaacaccgggcacccca 960
Query: 961 gggggcgagccggcgccgcacgtcaaacccgcggcgttggcggagcaacctggtgtgccg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gggggcgagccggcgccgcacgtcaaacccgcggcgttggcggagcaacctggtgtgccg 1020
Query: 1021 ggccagcatgcgggcggggggacgcagtcggggcctgcccatgcggacgaatccgccgcg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 ggccagcatgcgggcggggggacgcagtcggggcctgcccatgcggacgaatccgccgcg 1080
Query: 1081 tcggtgacgccggctgcggcgtccggtgtcccgggcgcacgggcggcggccgccgcgccg 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 tcggtgacgccggctgcggcgtccggtgtcccgggcgcacgggcggcggccgccgcgccg 1140
Query: 1141 agcggtaccgccgtgggagcgggcgcgcgttcgagcgtgggtacggccgcggcctcgggc 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 agcggtaccgccgtgggagcgggcgcgcgttcgagcgtgggtacggccgcggcctcgggc 1200
Query: 1201 gcggggtcgcatgctgccactgggcgggcgccggtggctacctcggacaaggcggcggca 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 gcggggtcgcatgctgccactgggcgggcgccggtggctacctcggacaaggcggcggca 1260
Query: 1261 ccgagcacgcgggcggcctcggcgcggacggcacctcctgcccgcccgccgtcgaccgat 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 ccgagcacgcgggcggcctcggcgcggacggcacctcctgcccgcccgccgtcgaccgat 1320
Query: 1321 cacatcgacaaacccgatcgcagcgagtctgcagatgacggtacgccggtgtcgatgatc 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 cacatcgacaaacccgatcgcagcgagtctgcagatgacggtacgccggtgtcgatgatc 1380
Query: 1381 ccggtgtcggcggctcgggcggcacgcgacgccgccactgcagctgccagcgcccgccag 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 ccggtgtcggcggctcgggcggcacgcgacgccgccactgcagctgccagcgcccgccag 1440
Query: 1441 cgtggccgcggtgatgcgctgcggttggcgcgacgcatcgcggcggcgctcaacgcgtcc 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 cgtggccgcggtgatgcgctgcggttggcgcgacgcatcgcggcggcgctcaacgcgtcc 1500
Query: 1501 gacaacaacgcgggcgactacgggttcttctggatcaccgcggtgaccaccgacggttcc 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 gacaacaacgcgggcgactacgggttcttctggatcaccgcggtgaccaccgacggttcc 1560
Query: 1561 atcgtcgtggccaacagctatgggctggcctacatacccgacgggatggaattgccgaat 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 atcgtcgtggccaacagctatgggctggcctacatacccgacgggatggaattgccgaat 1620
Query: 1621 aaggtgtacttggccagcgcggatcacgcaatcccggttgacgaaattgcacgctgtgcc 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 aaggtgtacttggccagcgcggatcacgcaatcccggttgacgaaattgcacgctgtgcc 1680
Query: 1681 acctacccggttttggccgtgcaagcctgggcggctttccacgacatgacgctgcgggcg 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 acctacccggttttggccgtgcaagcctgggcggctttccacgacatgacgctgcgggcg 1740
Query: 1741 gtgatcggtaccgcggagcagttggccagttcggatcccggtgtggccaagattgtgctg 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 gtgatcggtaccgcggagcagttggccagttcggatcccggtgtggccaagattgtgctg 1800
Query: 1801 gagccagatgacattccggagagcggcaaaatgacgggccggtcgcggctggaggtcgtc 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 gagccagatgacattccggagagcggcaaaatgacgggccggtcgcggctggaggtcgtc 1860
Query: 1861 gacccctcggcggcggctcagctggccgacactaccgatcagcgtttgctcgacttgttg 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 gacccctcggcggcggctcagctggccgacactaccgatcagcgtttgctcgacttgttg 1920
Query: 1921 ccgccggcgccggtggatgtcaatccaccgggcgatgagcggcacatgctgtggttcgag 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 ccgccggcgccggtggatgtcaatccaccgggcgatgagcggcacatgctgtggttcgag 1980
Query: 1981 ctgatgaagcccatgaccagcaccgctaccggccgcgaggccgctcatctgcgggcgttc 2040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1981 ctgatgaagcccatgaccagcaccgctaccggccgcgaggccgctcatctgcgggcgttc 2040
Query: 2041 cgggcctacgctgcccactcacaggagattgccctgcaccaagcgcacactgcgactgac 2100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2041 cgggcctacgctgcccactcacaggagattgccctgcaccaagcgcacactgcgactgac 2100
Query: 2101 gcggccgtccagcgtgtggccgtcgcggactggctgtactggcaatacgtcaccgggttg 2160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2101 gcggccgtccagcgtgtggccgtcgcggactggctgtactggcaatacgtcaccgggttg 2160
Query: 2161 ctcgaccgggccctggccgccgcatgctga 2190
||||||||||||||||||||||||||||||
Sbjct: 2161 ctcgaccgggccctggccgccgcatgctga 2190
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00323 195193 193811 len=1383
(1383 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218398.1 [gene=Rv3881c] [protein=hypoth... 2742 0.0
>lcl|NC_000962.2_cdsid_NP_218398.1 [gene=Rv3881c]
[protein=hypothetical protein] [protein_id=NP_218398.1]
[location=complement(4360543..4361925)]
Length = 1383
Score = 2742 bits (1383), Expect = 0.0
Identities = 1383/1383 (100%)
Strand = Plus / Plus
Query: 1 atgacgcagtcgcagaccgtgacggtggatcagcaagagattttgaacagggccaacgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgacgcagtcgcagaccgtgacggtggatcagcaagagattttgaacagggccaacgag 60
Query: 61 gtggaggccccgatggcggacccaccgactgatgtccccatcacaccgtgcgaactcacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtggaggccccgatggcggacccaccgactgatgtccccatcacaccgtgcgaactcacg 120
Query: 121 gcggctaaaaacgccgcccaacagctggtattgtccgccgacaacatgcgggaatacctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcggctaaaaacgccgcccaacagctggtattgtccgccgacaacatgcgggaatacctg 180
Query: 181 gcggccggtgccaaagagcggcagcgtctggcgacctcgctgcgcaacgcggccaaggcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcggccggtgccaaagagcggcagcgtctggcgacctcgctgcgcaacgcggccaaggcg 240
Query: 241 tatggcgaggttgatgaggaggctgcgaccgcgctggacaacgacggcgaaggaactgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tatggcgaggttgatgaggaggctgcgaccgcgctggacaacgacggcgaaggaactgtg 300
Query: 301 caggcagaatcggccggggccgtcggaggggacagttcggccgaactaaccgatacgccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caggcagaatcggccggggccgtcggaggggacagttcggccgaactaaccgatacgccg 360
Query: 361 agggtggccacggccggtgaacccaacttcatggatctcaaagaagcggcaaggaagctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agggtggccacggccggtgaacccaacttcatggatctcaaagaagcggcaaggaagctc 420
Query: 421 gaaacgggcgaccaaggcgcatcgctcgcgcactttgcggatgggtggaacactttcaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaaacgggcgaccaaggcgcatcgctcgcgcactttgcggatgggtggaacactttcaac 480
Query: 481 ctgacgctgcaaggcgacgtcaagcggttccgggggtttgacaactgggaaggcgatgcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctgacgctgcaaggcgacgtcaagcggttccgggggtttgacaactgggaaggcgatgcg 540
Query: 541 gctaccgcttgcgaggcttcgctcgatcaacaacggcaatggatactccacatggccaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gctaccgcttgcgaggcttcgctcgatcaacaacggcaatggatactccacatggccaaa 600
Query: 601 ttgagcgctgcgatggccaagcaggctcaatatgtcgcgcagctgcacgtgtgggctagg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagcgctgcgatggccaagcaggctcaatatgtcgcgcagctgcacgtgtgggctagg 660
Query: 661 cgggaacatccgacttatgaagacatagtcgggctcgaacggctttacgcggaaaaccct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaacatccgacttatgaagacatagtcgggctcgaacggctttacgcggaaaaccct 720
Query: 721 tcggcccgcgaccaaattctcccggtgtacgcggagtatcagcagaggtcggagaaggtg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tcggcccgcgaccaaattctcccggtgtacgcggagtatcagcagaggtcggagaaggtg 780
Query: 781 ctgaccgaatacaacaacaaggcagccctggaaccggtaaacccgccgaagcctcccccc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ctgaccgaatacaacaacaaggcagccctggaaccggtaaacccgccgaagcctcccccc 840
Query: 841 gccatcaagatcgacccgcccccgcctccgcaagagcagggattgatccctggcttcctg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gccatcaagatcgacccgcccccgcctccgcaagagcagggattgatccctggcttcctg 900
Query: 901 atgccgccgtctgacggctccggtgtgactcccggtaccgggatgccagccgcaccgatg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 atgccgccgtctgacggctccggtgtgactcccggtaccgggatgccagccgcaccgatg 960
Query: 961 gttccgcctaccggatcgccgggtggtggcctcccggctgacacggcggcgcagctgacg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gttccgcctaccggatcgccgggtggtggcctcccggctgacacggcggcgcagctgacg 1020
Query: 1021 tcggctgggcgggaagccgcagcgctgtcgggcgacgtggcggtcaaagcggcatcgctc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 tcggctgggcgggaagccgcagcgctgtcgggcgacgtggcggtcaaagcggcatcgctc 1080
Query: 1081 ggtggcggtggaggcggcggggtgccgtcggcgccgttgggatccgcgatcgggggcgcc 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ggtggcggtggaggcggcggggtgccgtcggcgccgttgggatccgcgatcgggggcgcc 1140
Query: 1141 gaatcggtgcggcccgctggcgctggtgacattgccggcttaggccagggaagggccggc 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gaatcggtgcggcccgctggcgctggtgacattgccggcttaggccagggaagggccggc 1200
Query: 1201 ggcggcgccgcgctgggcggcggtggcatgggaatgccgatgggtgccgcgcatcaggga 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ggcggcgccgcgctgggcggcggtggcatgggaatgccgatgggtgccgcgcatcaggga 1260
Query: 1261 caagggggcgccaagtccaagggttctcagcaggaagacgaggcgctctacaccgaggat 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 caagggggcgccaagtccaagggttctcagcaggaagacgaggcgctctacaccgaggat 1320
Query: 1321 cgggcatggaccgaggccgtcattggtaaccgtcggcgccaggacagtaaggagtcgaag 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 cgggcatggaccgaggccgtcattggtaaccgtcggcgccaggacagtaaggagtcgaag 1380
Query: 1381 tga 1383
|||
Sbjct: 1381 tga 1383
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00327 196688 195300 len=1389
(1389 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218399.1 [gene=Rv3882c] [protein=hypoth... 2753 0.0
>lcl|NC_000962.2_cdsid_NP_218399.1 [gene=Rv3882c]
[protein=hypothetical protein] [protein_id=NP_218399.1]
[location=complement(4362032..4363420)]
Length = 1389
Score = 2753 bits (1389), Expect = 0.0
Identities = 1389/1389 (100%)
Strand = Plus / Plus
Query: 1 atgagaaatcctttagggctgcggttcagcaccgggcacgccttgcttgcctccgcgttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgagaaatcctttagggctgcggttcagcaccgggcacgccttgcttgcctccgcgttg 60
Query: 61 gccccgccatgcatcatcgcattcttggagacgcgctactggtgggcggggattgcgctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gccccgccatgcatcatcgcattcttggagacgcgctactggtgggcggggattgcgctg 120
Query: 121 gcctcgttgggcgtcatcgtggccacggtcactttctacggccgccggatcaccggctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcctcgttgggcgtcatcgtggccacggtcactttctacggccgccggatcaccggctgg 180
Query: 181 gtggcggcggtgtacgcgtggttgcggcggcgccgacggcccccggattcctcgtcagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtggcggcggtgtacgcgtggttgcggcggcgccgacggcccccggattcctcgtcagaa 240
Query: 241 cctgtggtcggggccaccgtgaagccaggagatcacgttgcggtgcgctggcaaggcgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cctgtggtcggggccaccgtgaagccaggagatcacgttgcggtgcgctggcaaggcgag 300
Query: 301 tttctggtcgccgtaatcgagctcattccccgaccattcacgccgacggtcatcgtcgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttctggtcgccgtaatcgagctcattccccgaccattcacgccgacggtcatcgtcgac 360
Query: 361 gggcaagcccacaccgacgacatgctggacaccggactggtggaggagctcctgtcggtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gggcaagcccacaccgacgacatgctggacaccggactggtggaggagctcctgtcggtg 420
Query: 421 cactgtcccgacttggaggccgatatcgtctcagccggctaccgcgtcggcaataccgca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cactgtcccgacttggaggccgatatcgtctcagccggctaccgcgtcggcaataccgca 480
Query: 481 gcgccggacgtggtgagtctgtatcagcaggtgatcgggacagacccggcgccggcgaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gcgccggacgtggtgagtctgtatcagcaggtgatcgggacagacccggcgccggcgaac 540
Query: 541 cgccggacctggatcgtgctgcgcgccgacccggaacgcacccgcaaatcggcgcagcgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cgccggacctggatcgtgctgcgcgccgacccggaacgcacccgcaaatcggcgcagcgc 600
Query: 601 cgcgatgaaggcgtcgcaggactggcccggtatttggtggcgtccgcgacgcgcattgcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cgcgatgaaggcgtcgcaggactggcccggtatttggtggcgtccgcgacgcgcattgcc 660
Query: 661 gatcgactggctagccatggtgtcgacgcggtgtgtggccgcagcttcgatgactacgac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gatcgactggctagccatggtgtcgacgcggtgtgtggccgcagcttcgatgactacgac 720
Query: 721 cacgccaccgacatcggctttgtgcgggagaaatggtcgatgatcaaggggcgcgatgcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cacgccaccgacatcggctttgtgcgggagaaatggtcgatgatcaaggggcgcgatgcc 780
Query: 781 tacactgccgcctacgcggcgcccggaggtccggatgtatggtggtcggcgcgcgcggac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacactgccgcctacgcggcgcccggaggtccggatgtatggtggtcggcgcgcgcggac 840
Query: 841 cacaccatcaccagagtccgggtcgcgccggggatggccccgcagtccacggtgttgctg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 cacaccatcaccagagtccgggtcgcgccggggatggccccgcagtccacggtgttgctg 900
Query: 901 accacggcggacaagcccaagacacccaggggcttcgcccgcctatttggcgggcagcgg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 accacggcggacaagcccaagacacccaggggcttcgcccgcctatttggcgggcagcgg 960
Query: 961 cccgcgctgcaaggccagcatctggtggccaaccgccactgccagctgccgatcgggtca 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 cccgcgctgcaaggccagcatctggtggccaaccgccactgccagctgccgatcgggtca 1020
Query: 1021 gctggggtactggtcggcgagacggtgaaccgatgcccggtctacatgcccttcgacgat 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gctggggtactggtcggcgagacggtgaaccgatgcccggtctacatgcccttcgacgat 1080
Query: 1081 gtcgacatcgccctcaacctgggtgacgctcagacattcacccagttcgtggtgcgtgcg 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gtcgacatcgccctcaacctgggtgacgctcagacattcacccagttcgtggtgcgtgcg 1140
Query: 1141 gcggcggcaggtgcgatggtcacagtcgggccacagttcgaggaatttgcccggttgatc 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gcggcggcaggtgcgatggtcacagtcgggccacagttcgaggaatttgcccggttgatc 1200
Query: 1201 ggcgcacacatcgggcaggaggtaaaggtggcgtggccgaatgcgacgacctatctcggc 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ggcgcacacatcgggcaggaggtaaaggtggcgtggccgaatgcgacgacctatctcggc 1260
Query: 1261 ccgcatcccggtattgaccgggtgattctgcggcacaatgtgatcggtaccccgcggcat 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 ccgcatcccggtattgaccgggtgattctgcggcacaatgtgatcggtaccccgcggcat 1320
Query: 1321 cggcagctgccgattcgccgggtttccccacccgaggaaagccgctaccagatggcgctg 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 cggcagctgccgattcgccgggtttccccacccgaggaaagccgctaccagatggcgctg 1380
Query: 1381 ccgaagtag 1389
|||||||||
Sbjct: 1381 ccgaagtag 1389
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00330 198055 196685 len=1371
(1371 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218400.1 [gene=mycP1] [protein=membrane... 2658 0.0
>lcl|NC_000962.2_cdsid_NP_218400.1 [gene=mycP1]
[protein=membrane-anchored mycosin MYCP1]
[protein_id=NP_218400.1]
[location=complement(4363417..4364757)]
Length = 1341
Score = 2658 bits (1341), Expect = 0.0
Identities = 1341/1341 (100%)
Strand = Plus / Plus
Query: 31 gtgcaccgtatctttctgatcacggtggcgctggcgttgctcaccgcgtcgcccgcatcg 90
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgcaccgtatctttctgatcacggtggcgctggcgttgctcaccgcgtcgcccgcatcg 60
Query: 91 gccatcacgccaccgccgatcgatccgggcgcgttgccgcccgacgtgacgggcccggat 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gccatcacgccaccgccgatcgatccgggcgcgttgccgcccgacgtgacgggcccggat 120
Query: 151 cagcctaccgaacagcgcgttttgtgcgcgtcgcccaccacgctgccggggtccgggttc 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cagcctaccgaacagcgcgttttgtgcgcgtcgcccaccacgctgccggggtccgggttc 180
Query: 211 cacgatccgccgtggagcaacacgtatctgggcgtggccgatgcccacaagttcgcgacc 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cacgatccgccgtggagcaacacgtatctgggcgtggccgatgcccacaagttcgcgacc 240
Query: 271 ggggccggggtgacggtggcggtgatcgacaccggtgtcgacgcttcgccacgggtcccg 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggggccggggtgacggtggcggtgatcgacaccggtgtcgacgcttcgccacgggtcccg 300
Query: 331 gcggaacctggcggcgatttcgtcgaccaggccggtaacggcctgtctgactgtgatgcc 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcggaacctggcggcgatttcgtcgaccaggccggtaacggcctgtctgactgtgatgcc 360
Query: 391 catgggactctcacagcatccatcatcgcgggccggcccgcgcccaccgacgggttcgtc 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 catgggactctcacagcatccatcatcgcgggccggcccgcgcccaccgacgggttcgtc 420
Query: 451 ggcgtcgcgcccgacgctcgactgctctcgctacgtcagacgtctgaggccttcgaaccg 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggcgtcgcgcccgacgctcgactgctctcgctacgtcagacgtctgaggccttcgaaccg 480
Query: 511 gtcggctcacaagccaacccgaatgaccccaacgccaccccggccgccggttccatccgc 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtcggctcacaagccaacccgaatgaccccaacgccaccccggccgccggttccatccgc 540
Query: 571 agtcttgcccgcgccgtggtgcacgccgccaacctcggcgtgggtgtgatcaacatcagt 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agtcttgcccgcgccgtggtgcacgccgccaacctcggcgtgggtgtgatcaacatcagt 600
Query: 631 gaagccgcctgctacaaggtgagcaggccgatcgatgaaacctcactgggtgcatccatc 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gaagccgcctgctacaaggtgagcaggccgatcgatgaaacctcactgggtgcatccatc 660
Query: 691 gactatgcggtcaacgtcaaaggcgtggtggtggtggtcgcggccggcaacaccggtggc 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gactatgcggtcaacgtcaaaggcgtggtggtggtggtcgcggccggcaacaccggtggc 720
Query: 751 gattgcgtacagaatccggcgccggacccgtccacacccggcgacccacgcggctggaac 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gattgcgtacagaatccggcgccggacccgtccacacccggcgacccacgcggctggaac 780
Query: 811 aatgtgcagaccgttgtcaccccggcgtggtacgcaccgctggtgttaagcgtcggcggt 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aatgtgcagaccgttgtcaccccggcgtggtacgcaccgctggtgttaagcgtcggcggt 840
Query: 871 atcggccagaccgggatgcccagctcgttctcgatgcacggaccgtgggtggacgtggcc 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 atcggccagaccgggatgcccagctcgttctcgatgcacggaccgtgggtggacgtggcc 900
Query: 931 gcgcccgcagaaaacatcgtcgcgctcggcgacaccggtgaaccggtgaatgcgctgcaa 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gcgcccgcagaaaacatcgtcgcgctcggcgacaccggtgaaccggtgaatgcgctgcaa 960
Query: 991 ggccgggaggggccggtacccatcgccggcacctcgtttgccgcggcatatgtgtcgggt 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ggccgggaggggccggtacccatcgccggcacctcgtttgccgcggcatatgtgtcgggt 1020
Query: 1051 ctggcggccctgcttcggcagcggttccccgacctgacgccggcgcagatcatccaccgg 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 ctggcggccctgcttcggcagcggttccccgacctgacgccggcgcagatcatccaccgg 1080
Query: 1111 atcaccgccaccgcgagacaccccgggggcggggtcgacgacctggtcggcgccggcgtc 1170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 atcaccgccaccgcgagacaccccgggggcggggtcgacgacctggtcggcgccggcgtc 1140
Query: 1171 atcgatgcggtggccgcgctgacgtgggacattccgcccggccctgcttcggcgccatac 1230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 atcgatgcggtggccgcgctgacgtgggacattccgcccggccctgcttcggcgccatac 1200
Query: 1231 aacgtcagacgacttccacccccggtggtggagccgggtcccgatcgtcgcccgattacg 1290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 aacgtcagacgacttccacccccggtggtggagccgggtcccgatcgtcgcccgattacg 1260
Query: 1291 gctgtggcgttggtggccgtcggccttacgttggccctgggcctgggcgcgctggctaga 1350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 gctgtggcgttggtggccgtcggccttacgttggccctgggcctgggcgcgctggctaga 1320
Query: 1351 cgggcgctgagccgccgatga 1371
|||||||||||||||||||||
Sbjct: 1321 cgggcgctgagccgccgatga 1341
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00335 200106 198247 len=1860
(1860 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218401.1 [gene=Rv3884c] [protein=CBXX/C... 3687 0.0
>lcl|NC_000962.2_cdsid_NP_218401.1 [gene=Rv3884c] [protein=CBXX/CFQX
family protein] [protein_id=NP_218401.1]
[location=complement(4364979..4366838)]
Length = 1860
Score = 3687 bits (1860), Expect = 0.0
Identities = 1860/1860 (100%)
Strand = Plus / Plus
Query: 1 atgtcgagaatggtggacacgatgggtgatttactcactgcgcgccggcatttcgatcgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgtcgagaatggtggacacgatgggtgatttactcactgcgcgccggcatttcgatcgg 60
Query: 61 gcgatgacgatcaagaatggccagggatgcgtggcggcgttgcctgagtttgtggctgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcgatgacgatcaagaatggccagggatgcgtggcggcgttgcctgagtttgtggctgcc 120
Query: 121 accgaggccgatccgtcgatggccgacgcgtggctgggtcgtatcgcctgcggtgaccgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 accgaggccgatccgtcgatggccgacgcgtggctgggtcgtatcgcctgcggtgaccgc 180
Query: 181 gatctggcctcgcttaagcagctcaacgcccatagcgagtggctgcaccgcgagaccacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatctggcctcgcttaagcagctcaacgcccatagcgagtggctgcaccgcgagaccacg 240
Query: 241 cggatcggccggacgttggccgctgaggtccagctgggaccatccatcgggatcacggtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cggatcggccggacgttggccgctgaggtccagctgggaccatccatcgggatcacggtg 300
Query: 301 accgacgcatctcaggtggggctggcgctgtcgtcggcgttgacgatcgcgggggagtat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 accgacgcatctcaggtggggctggcgctgtcgtcggcgttgacgatcgcgggggagtat 360
Query: 361 gcgaaggccgatgccctgttagcaaaccgcgagctattggattcgtggcgcaactaccag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcgaaggccgatgccctgttagcaaaccgcgagctattggattcgtggcgcaactaccag 420
Query: 421 tggcatcagctggctcgggcgttcctgatgtacgtcacgcagcgatggcccgacgtgttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tggcatcagctggctcgggcgttcctgatgtacgtcacgcagcgatggcccgacgtgttg 480
Query: 481 tcgacggccgccgaggatctgccgccacaggcgatcgtcatgccggcggtgaccgcgtcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcgacggccgccgaggatctgccgccacaggcgatcgtcatgccggcggtgaccgcgtcg 540
Query: 541 atttgtgcgctggcagcccacgccgccgcccatctcgggcaggggcgagtggccctggac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atttgtgcgctggcagcccacgccgccgcccatctcgggcaggggcgagtggccctggac 600
Query: 601 tggctggaccgggtggacgtgatcggacacagcaggtcatcggagcggttcggcgccgac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tggctggaccgggtggacgtgatcggacacagcaggtcatcggagcggttcggcgccgac 660
Query: 661 gtgctcaccgcggcgatcggaccggccgatattccgctgctggtcgccgacttggcgtat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gtgctcaccgcggcgatcggaccggccgatattccgctgctggtcgccgacttggcgtat 720
Query: 721 gtgcgggggatggtgtaccggcaactgcatgaggaggacaaggcccagatctggctgtcg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtgcgggggatggtgtaccggcaactgcatgaggaggacaaggcccagatctggctgtcg 780
Query: 781 aaggccaccatcaacggggtgctcaccgacgccgccaaagaagccctggcggacccgaac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aaggccaccatcaacggggtgctcaccgacgccgccaaagaagccctggcggacccgaac 840
Query: 841 ctgcgcttgattgttaccgatgaacgaaccatcgccagccgctccgaccgttgggatgct 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ctgcgcttgattgttaccgatgaacgaaccatcgccagccgctccgaccgttgggatgct 900
Query: 901 tcgacggcgaaaagccgcgaccagctcgatgacgacaatgcagcgcagcggcgcggcgag 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 tcgacggcgaaaagccgcgaccagctcgatgacgacaatgcagcgcagcggcgcggcgag 960
Query: 961 ctgctagccgagggccgggaactgctggccaaacaggtgggcctggcggcggtcaagcaa 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ctgctagccgagggccgggaactgctggccaaacaggtgggcctggcggcggtcaagcaa 1020
Query: 1021 gcggtatcggcgctggaagaccaactcgaggtgcgcatgatgcgcctagagcacggccta 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gcggtatcggcgctggaagaccaactcgaggtgcgcatgatgcgcctagagcacggccta 1080
Query: 1081 ccggtggaggggcagaccaaccacatgttgctggtggggccaccaggcacaggtaagaca 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ccggtggaggggcagaccaaccacatgttgctggtggggccaccaggcacaggtaagaca 1140
Query: 1141 accaccgctgaagcgctcggcaagatctacgccggcatggggatcgtgcgtcaccccgaa 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 accaccgctgaagcgctcggcaagatctacgccggcatggggatcgtgcgtcaccccgaa 1200
Query: 1201 attcgagaagttcgccgatcggacttctgtgggcactacatcggggagtcaggacccaag 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 attcgagaagttcgccgatcggacttctgtgggcactacatcggggagtcaggacccaag 1260
Query: 1261 acgaacgagctgatcgaaaagtcactcgggcgaatcattttcatggacgagttctactcg 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 acgaacgagctgatcgaaaagtcactcgggcgaatcattttcatggacgagttctactcg 1320
Query: 1321 ctgatcgaacgtcatcaagacggaacaccggacatgatcggcatggaggcggtcaatcaa 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 ctgatcgaacgtcatcaagacggaacaccggacatgatcggcatggaggcggtcaatcaa 1380
Query: 1381 ctcctggttcaattggaaacacaccgattcgacttctgtttcatcggggccggctatgag 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 ctcctggttcaattggaaacacaccgattcgacttctgtttcatcggggccggctatgag 1440
Query: 1441 gatcaggtggatgaattcctcaccgtgaacccgggtttggctggccggttcaaccgaaag 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 gatcaggtggatgaattcctcaccgtgaacccgggtttggctggccggttcaaccgaaag 1500
Query: 1501 ctgcggttcgagtcttattcgccggtggagatcgtcgagattggacaccgctacgctaca 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 ctgcggttcgagtcttattcgccggtggagatcgtcgagattggacaccgctacgctaca 1560
Query: 1561 ccgcgcgccagccagctcgatgacgccgcacgggaggtattcctcgacgcggtcaccacc 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 ccgcgcgccagccagctcgatgacgccgcacgggaggtattcctcgacgcggtcaccacc 1620
Query: 1621 atccgtaactacaccacccctagtgggcagcacggtatcgacgctatgcaaaacggtcgg 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 atccgtaactacaccacccctagtgggcagcacggtatcgacgctatgcaaaacggtcgg 1680
Query: 1681 ttcgcccgcaacgtgatcgaacgcgccgaagggttccgggacacccgggtggttgcgcaa 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 ttcgcccgcaacgtgatcgaacgcgccgaagggttccgggacacccgggtggttgcgcaa 1740
Query: 1741 aaacgtgcgggccaaccggtatcggttcaggatctgcagatcatcaccgccaccgacatc 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 aaacgtgcgggccaaccggtatcggttcaggatctgcagatcatcaccgccaccgacatc 1800
Query: 1801 gatgccgcgatacgcagcgtgtgctcagacaaccgagacatggccgcgatcgtttggtag 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 gatgccgcgatacgcagcgtgtgctcagacaaccgagacatggccgcgatcgtttggtag 1860
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00342 201789 200176 len=1614
(1614 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218402.1 [gene=Rv3885c] [protein=hypoth... 3200 0.0
>lcl|NC_000962.2_cdsid_NP_218402.1 [gene=Rv3885c]
[protein=hypothetical protein] [protein_id=NP_218402.1]
[location=complement(4366908..4368521)]
Length = 1614
Score = 3200 bits (1614), Expect = 0.0
Identities = 1614/1614 (100%)
Strand = Plus / Plus
Query: 1 ttgacgtccaagctgaccgggttcagcccgcgcagtgcgaggcgggtcgccggggtgtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgacgtccaagctgaccgggttcagcccgcgcagtgcgaggcgggtcgccggggtgtgg 60
Query: 61 acagtgttcgtgctcgcgtcggcgggctgggcgctgggcggccagctaggtgcggtcatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acagtgttcgtgctcgcgtcggcgggctgggcgctgggcggccagctaggtgcggtcatg 120
Query: 121 gctgtcgtggtcggcgtcgccttggtgttcgtacagtggtggggtcagccggcgtggtcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctgtcgtggtcggcgtcgccttggtgttcgtacagtggtggggtcagccggcgtggtcg 180
Query: 181 tgggcggtactggggctgcggggtcggcgtcccgtcaaatggaatgacccaattaccttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgggcggtactggggctgcggggtcggcgtcccgtcaaatggaatgacccaattaccttg 240
Query: 241 gccaacaaccgatccgggggtggcgtccgcgtgcaagacggtgtcgcggtggtggcggtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gccaacaaccgatccgggggtggcgtccgcgtgcaagacggtgtcgcggtggtggcggtg 300
Query: 301 caacttctcggccgagcgcaccgggcgactacggtcaccgggtcggtgaccgtagaaagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caacttctcggccgagcgcaccgggcgactacggtcaccgggtcggtgaccgtagaaagc 360
Query: 361 gacaacgtgattgacgtcgttgagctcgcgccgttgctgcgccacccgctggacctggaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gacaacgtgattgacgtcgttgagctcgcgccgttgctgcgccacccgctggacctggaa 420
Query: 421 ctcgattcaatcagcgtcgtcaccttcggctcgcgaaccggcaccgtcggcgattacccg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctcgattcaatcagcgtcgtcaccttcggctcgcgaaccggcaccgtcggcgattacccg 480
Query: 481 cgggtgtatgacgcggagatcggtacgccgccgtatgccgggcggcgcgaaacgtggctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgggtgtatgacgcggagatcggtacgccgccgtatgccgggcggcgcgaaacgtggctg 540
Query: 541 atcatgcggcttccggtgatcggcaacacccaagctttacgctggcgtaccagcgttggg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atcatgcggcttccggtgatcggcaacacccaagctttacgctggcgtaccagcgttggg 600
Query: 601 gccgctgccatttcggtcgcccaacgcgttgccagctccctgcgctgtcagggcttgcgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gccgctgccatttcggtcgcccaacgcgttgccagctccctgcgctgtcagggcttgcgc 660
Query: 661 gccaaactggccaccgcaacagacttggctgagcttgatcgccggctggggtcggacgcg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gccaaactggccaccgcaacagacttggctgagcttgatcgccggctggggtcggacgcg 720
Query: 721 gtagccgggagtgcgcagcgctggaaagctatccgcggtgaagccgggtggatgacgacg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtagccgggagtgcgcagcgctggaaagctatccgcggtgaagccgggtggatgacgacg 780
Query: 781 tatgcgtacccggctgaggcgatttcgtcgcgggttctctcgcaagcctggacgctgcgt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tatgcgtacccggctgaggcgatttcgtcgcgggttctctcgcaagcctggacgctgcgt 840
Query: 841 gccgatgaggtcatccagaacgtaacggtgtatccggacgcgacgtgcaccgcgaccatc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gccgatgaggtcatccagaacgtaacggtgtatccggacgcgacgtgcaccgcgaccatc 900
Query: 901 accgtgcgcacaccgacgccggcgcctaccccgcccagtgtgatcttgcgtcggctcaat 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 accgtgcgcacaccgacgccggcgcctaccccgcccagtgtgatcttgcgtcggctcaat 960
Query: 961 ggtgagcaagccgccgcggctgcggccaacatgtgcgggccacgtccacacctacgcgga 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ggtgagcaagccgccgcggctgcggccaacatgtgcgggccacgtccacacctacgcgga 1020
Query: 1021 cagcggcgctgcccgttgccggcgcagctagtcaccgagatcggaccgtcgggggtgttg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 cagcggcgctgcccgttgccggcgcagctagtcaccgagatcggaccgtcgggggtgttg 1080
Query: 1081 attggcaagctgagcaacggggaccggctgatgattcccgttaccgacgccggtgagctg 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 attggcaagctgagcaacggggaccggctgatgattcccgttaccgacgccggtgagctg 1140
Query: 1141 tcgcgcgtcttcgtggccgcggacgacacgatcgccaagaggatcgtgattcgcgtcgtc 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 tcgcgcgtcttcgtggccgcggacgacacgatcgccaagaggatcgtgattcgcgtcgtc 1200
Query: 1201 ggtgccggtgagcgggtgtgtgtgcacactcgcgaccaagagcgttgggccagcgtacgc 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ggtgccggtgagcgggtgtgtgtgcacactcgcgaccaagagcgttgggccagcgtacgc 1260
Query: 1261 atgccgcagttgagcatcgtcggcacaccacggcccgcgccgcgcaccactgtcggcgtc 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 atgccgcagttgagcatcgtcggcacaccacggcccgcgccgcgcaccactgtcggcgtc 1320
Query: 1321 gtggagtacgtgcggcggcgcaagaacggcgatgacggcaaatctgaaggcagcggtgtc 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 gtggagtacgtgcggcggcgcaagaacggcgatgacggcaaatctgaaggcagcggtgtc 1380
Query: 1381 gatgtcgcgatttcgcccacgccacggccagccagtgtcatcaccattgcccgacccggt 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 gatgtcgcgatttcgcccacgccacggccagccagtgtcatcaccattgcccgacccggt 1440
Query: 1441 acctcgctgtccgagagcgatcggcatggcttcgaggtgaccatcgaacaaatcgatcgg 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 acctcgctgtccgagagcgatcggcatggcttcgaggtgaccatcgaacaaatcgatcgg 1500
Query: 1501 gcaacggtgaaagtcggtgcggcaggacaaaactggctggttgagatggaaatgttccgt 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 gcaacggtgaaagtcggtgcggcaggacaaaactggctggttgagatggaaatgttccgt 1560
Query: 1561 gcggagaaccgctatgtcagccttgagccggtcacgatgtcgataggccggtag 1614
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 gcggagaaccgctatgtcagccttgagccggtcacgatgtcgataggccggtag 1614
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00345 203438 201786 len=1653
(1653 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218403.1 [gene=mycP2] [protein=hypothet... 3277 0.0
>lcl|NC_000962.2_cdsid_NP_218403.1 [gene=mycP2] [protein=hypothetical
protein] [protein_id=NP_218403.1]
[location=complement(4368518..4370170)]
Length = 1653
Score = 3277 bits (1653), Expect = 0.0
Identities = 1653/1653 (100%)
Strand = Plus / Plus
Query: 1 atggcttcgccactaaaccgacctggcctgcgggccgcggccgcgagcgccgccctcacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggcttcgccactaaaccgacctggcctgcgggccgcggccgcgagcgccgccctcacc 60
Query: 61 ctcgttgctttgtcagctaatgttcctgcggcacaggctatcccaccgccgtcggtagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctcgttgctttgtcagctaatgttcctgcggcacaggctatcccaccgccgtcggtagat 120
Query: 121 ccggcgatggtgcctgcagacgcgcggcctggacctgatcagcccatgcgccgctccaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccggcgatggtgcctgcagacgcgcggcctggacctgatcagcccatgcgccgctccaac 180
Query: 181 agctgctccacaccgatcaccgtaagaaatcccgacgtggcgcagctagcaccgggcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agctgctccacaccgatcaccgtaagaaatcccgacgtggcgcagctagcaccgggcttc 240
Query: 241 aacctggtcaacatcagcaaggcgtggcagtacagcaccggcaacggtgtgcccgtggca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aacctggtcaacatcagcaaggcgtggcagtacagcaccggcaacggtgtgcccgtggca 300
Query: 301 gtcatcgacaccggcgtcagtcccaacccgcggctgccggtggtgcccggtggcgactac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtcatcgacaccggcgtcagtcccaacccgcggctgccggtggtgcccggtggcgactac 360
Query: 361 atcatgggggaggacggcctatcggattgcgacgcgcacggcacggtggtgagttcgatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atcatgggggaggacggcctatcggattgcgacgcgcacggcacggtggtgagttcgatc 420
Query: 421 attgccgctgcaccgcttgggattttaccgatgccaagggccatgccggccaccgcggcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 attgccgctgcaccgcttgggattttaccgatgccaagggccatgccggccaccgcggcg 480
Query: 481 ttcccaccgccggccgggccgccgccggtcaccgccgcgccggcgccgccggtagaagtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttcccaccgccggccgggccgccgccggtcaccgccgcgccggcgccgccggtagaagtc 540
Query: 541 ccgcccccgatgcccccgccgccgccggtgacgatcacccaaaccgttgcgccaccgcca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ccgcccccgatgcccccgccgccgccggtgacgatcacccaaaccgttgcgccaccgcca 600
Query: 601 ccaccacccgaggatgcgggcgccatggcgccgtccaatggaccgccggatccgcaaacc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ccaccacccgaggatgcgggcgccatggcgccgtccaatggaccgccggatccgcaaacc 660
Query: 661 gaagacgaacccgcggtgcccccacccccgccgggcgccccggacggggtggtgggggtg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gaagacgaacccgcggtgcccccacccccgccgggcgccccggacggggtggtgggggtg 720
Query: 721 gccccgcatgcgaccatcatctcgattcggcagtcctcgcgggccttcgagccggtcaac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gccccgcatgcgaccatcatctcgattcggcagtcctcgcgggccttcgagccggtcaac 780
Query: 781 ccgtcgtcggcgggtcccaactccgatgagaaagtcaaagcgggcaccctcgactcggtg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ccgtcgtcggcgggtcccaactccgatgagaaagtcaaagcgggcaccctcgactcggtg 840
Query: 841 gcgcgtgccgtggtacacgcggcgaacatgggggcgaaagtgatcaacatttcggtgacc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gcgcgtgccgtggtacacgcggcgaacatgggggcgaaagtgatcaacatttcggtgacc 900
Query: 901 gcatgtctgcctgcggcggctccgggcgaccagcgggtgctgggcgccgcgctgtggtat 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gcatgtctgcctgcggcggctccgggcgaccagcgggtgctgggcgccgcgctgtggtat 960
Query: 961 gcggccaccgtcaaggatgcggtgatcgtggcagcagccggcaacgacggggaggccggc 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gcggccaccgtcaaggatgcggtgatcgtggcagcagccggcaacgacggggaggccggc 1020
Query: 1021 tgcggcaacaacccgatgtatgacccgctggacccgtcagatccccgggactggcatcag 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 tgcggcaacaacccgatgtatgacccgctggacccgtcagatccccgggactggcatcag 1080
Query: 1081 gtcacggttgtgtcgtcaccgtcatggttctctgattacgtcctgtcggtaggtgccgtc 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gtcacggttgtgtcgtcaccgtcatggttctctgattacgtcctgtcggtaggtgccgtc 1140
Query: 1141 gatgcctacggcgccgcactggacaagagcatgtcgggtccgtgggtcggtgtcgcggca 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gatgcctacggcgccgcactggacaagagcatgtcgggtccgtgggtcggtgtcgcggca 1200
Query: 1201 ccgggaacccacatcatgggtctatcgccacaaggcggcggaccggtcaatgcctacccg 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ccgggaacccacatcatgggtctatcgccacaaggcggcggaccggtcaatgcctacccg 1260
Query: 1261 ccgtcgcggccaggcgagaagaatatgccgttctggggcaccagcttttcggcggcctac 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 ccgtcgcggccaggcgagaagaatatgccgttctggggcaccagcttttcggcggcctac 1320
Query: 1321 gtcagcggcgtcgcggcactggtgcgggccaaattccccgagttgactgcctaccaagtg 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 gtcagcggcgtcgcggcactggtgcgggccaaattccccgagttgactgcctaccaagtg 1380
Query: 1381 atcaaccggatcgtgcagtcggcgcacaatccgcctgcgggcgtggacaacaaactgggg 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 atcaaccggatcgtgcagtcggcgcacaatccgcctgcgggcgtggacaacaaactgggg 1440
Query: 1441 tacgggctggtggatccggtcgccgcattgacgtttaacatcccatccggtgatcggatg 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 tacgggctggtggatccggtcgccgcattgacgtttaacatcccatccggtgatcggatg 1500
Query: 1501 gccccgggtgcacagagccgggtgatcacgcccgccgcgccaccccctccgcccgatcac 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 gccccgggtgcacagagccgggtgatcacgcccgccgcgccaccccctccgcccgatcac 1560
Query: 1561 cgggcgcgcaatatcgctatcgggttcgtcggcgcagtggccaccggtgtgctggcaatg 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 cgggcgcgcaatatcgctatcgggttcgtcggcgcagtggccaccggtgtgctggcaatg 1620
Query: 1621 gcaatcggggctcggctacggagggcgcgttga 1653
|||||||||||||||||||||||||||||||||
Sbjct: 1621 gcaatcggggctcggctacggagggcgcgttga 1653
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00348 204952 203423 len=1530
(1530 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218404.1 [gene=Rv3887c] [protein=transm... 3033 0.0
>lcl|NC_000962.2_cdsid_NP_218404.1 [gene=Rv3887c]
[protein=transmembrane protein] [protein_id=NP_218404.1]
[location=complement(4370155..4371684)]
Length = 1530
Score = 3033 bits (1530), Expect = 0.0
Identities = 1530/1530 (100%)
Strand = Plus / Plus
Query: 1 gtgactgcgccgcataaggttgctttcccggcacgttgtgcggtcaacatttgctacgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgactgcgccgcataaggttgctttcccggcacgttgtgcggtcaacatttgctacgac 60
Query: 61 aagcatctatgctcccaggtattccccgccggaattccagtagagggattcttcgaagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagcatctatgctcccaggtattccccgccggaattccagtagagggattcttcgaagga 120
Query: 121 atggtggagttgttcgatgccgatctgaagcgcaaaggtttcgacggggttgcgctgccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atggtggagttgttcgatgccgatctgaagcgcaaaggtttcgacggggttgcgctgccg 180
Query: 181 gcgggtagctatgagctacacaagatcaacggggtgcggctggacatcaacaagagcctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcgggtagctatgagctacacaagatcaacggggtgcggctggacatcaacaagagcctc 240
Query: 241 gacgagctgggcgttcaagacggtgacacgctggtgctagtaccccgggttgctggcgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gacgagctgggcgttcaagacggtgacacgctggtgctagtaccccgggttgctggcgag 300
Query: 301 tcgtttgagccacagtacgaatcgctatccaccgggctggcggccatgggcaagtggctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcgtttgagccacagtacgaatcgctatccaccgggctggcggccatgggcaagtggctg 360
Query: 361 gggcgtgacggcggggatcggatgtttgcgccggtaacctcgctgactgccgcccacacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gggcgtgacggcggggatcggatgtttgcgccggtaacctcgctgactgccgcccacacc 420
Query: 421 gccatggcgattatcgccatggcggtcggagtggtgctggccctgacgttgcggacacgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gccatggcgattatcgccatggcggtcggagtggtgctggccctgacgttgcggacacgc 480
Query: 481 acaatcaccgacagcccggtcccagctgcgatggctggcgggattggtgtgctcctggtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acaatcaccgacagcccggtcccagctgcgatggctggcgggattggtgtgctcctggtg 540
Query: 541 atcggggcattggtggtgtggtggggttggcgggagcgccgtgacctgttcagtgggttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atcggggcattggtggtgtggtggggttggcgggagcgccgtgacctgttcagtgggttc 600
Query: 601 gggtggctggcggtggtgttgcttgccgtggccgccgcgtgcgcgccgccgggcgcgctc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gggtggctggcggtggtgttgcttgccgtggccgccgcgtgcgcgccgccgggcgcgctc 660
Query: 661 ggggcggctcatgcgctgatcgggctcgtggtggtggttctgggtgcgatcacgatcggc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ggggcggctcatgcgctgatcgggctcgtggtggtggttctgggtgcgatcacgatcggc 720
Query: 721 gtggcgacccgcaagcggtggcagaccgcagtggtcaccgcggtggtaacggtgtgcggg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtggcgacccgcaagcggtggcagaccgcagtggtcaccgcggtggtaacggtgtgcggg 780
Query: 781 atccttgccgctgtcgccgccgtccgaatgtttaggccggtttcgatgcaggtgctggcg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 atccttgccgctgtcgccgccgtccgaatgtttaggccggtttcgatgcaggtgctggcg 840
Query: 841 atttgcgtgctggtagggctgcttgtcctgatcaggatgactccgaccgttgcgttgtgg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 atttgcgtgctggtagggctgcttgtcctgatcaggatgactccgaccgttgcgttgtgg 900
Query: 901 gtggcacgggtacgacccccgcacttcggatcgatcaccggccgggatctgttcgcgcgc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gtggcacgggtacgacccccgcacttcggatcgatcaccggccgggatctgttcgcgcgc 960
Query: 961 cgtgcgggaatgcccgtcgatacggtggctccggtcagcgaagccgacgccgacgatgag 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 cgtgcgggaatgcccgtcgatacggtggctccggtcagcgaagccgacgccgacgatgag 1020
Query: 1021 gacaatgaactgaccgacatcaccgcccgcggcaccgcgatcgccgcgtcggcgcggctg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gacaatgaactgaccgacatcaccgcccgcggcaccgcgatcgccgcgtcggcgcggctg 1080
Query: 1081 gttaacgcggtacaggtgggtatgtgcgtcggggtgtcgctcgtactgcccgccgcggta 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gttaacgcggtacaggtgggtatgtgcgtcggggtgtcgctcgtactgcccgccgcggta 1140
Query: 1141 tggggggtgctgacgccacgtcaaccgtgggcctggttggcgttgttggttgccggcttg 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 tggggggtgctgacgccacgtcaaccgtgggcctggttggcgttgttggttgccggcttg 1200
Query: 1201 acggtgggcctcttcatcacccagggccgcgggttcgccgccaaataccaagcggtcgca 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 acggtgggcctcttcatcacccagggccgcgggttcgccgccaaataccaagcggtcgca 1260
Query: 1261 ttggtgtgcggggcgtccgccgcggtgtgtgccggggtgcttaagtacgccctcgacacc 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 ttggtgtgcggggcgtccgccgcggtgtgtgccggggtgcttaagtacgccctcgacacc 1320
Query: 1321 ccgaaaggtgttcagaccgggctgctttggcctgcgatcttcgtcgcggctttcgccgca 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 ccgaaaggtgttcagaccgggctgctttggcctgcgatcttcgtcgcggctttcgccgca 1380
Query: 1381 ttgggtttggccgtggccctcgtggtaccggcgacgcggtttaggccgatcatccggttg 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 ttgggtttggccgtggccctcgtggtaccggcgacgcggtttaggccgatcatccggttg 1440
Query: 1441 accgtggaatggctagaagtgctggccatgatcgcgttgttaccagcggctgcggcccta 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 accgtggaatggctagaagtgctggccatgatcgcgttgttaccagcggctgcggcccta 1500
Query: 1501 ggggggctgtttgcatggcttcgccactaa 1530
||||||||||||||||||||||||||||||
Sbjct: 1501 ggggggctgtttgcatggcttcgccactaa 1530
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 418 accgccatggcgattatcgccatggcggt 446
|||||||||||||| ||||||||||||||
Sbjct: 446 accgccatggcgataatcgccatggcggt 418
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00349 206606 206349 len=258
(258 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218406.1 [gene=Rv3889c] [protein=hypoth... 511 e-146
>lcl|NC_000962.2_cdsid_NP_218406.1 [gene=Rv3889c]
[protein=hypothetical protein] [protein_id=NP_218406.1]
[location=complement(4372800..4373630)]
Length = 831
Score = 511 bits (258), Expect = e-146
Identities = 258/258 (100%)
Strand = Plus / Plus
Query: 1 ttgccacctggtgggtggtcttggaacgccacggcaacctggtgcggctctacccggccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ttgccacctggtgggtggtcttggaacgccacggcaacctggtgcggctctacccggccg 352
Query: 61 gcaccgccagtgacgaggccggggccggcgaactcgtggtgggtcaggtcgagcggttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gcaccgccagtgacgaggccggggccggcgaactcgtggtgggtcaggtcgagcggttgt 412
Query: 121 gcggtgtcgctgaggccgccccgctacggccggtcaccgtcgacgccgacgaactactac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gcggtgtcgctgaggccgccccgctacggccggtcaccgtcgacgccgacgaactactac 472
Query: 181 acgccgtacgcgacgccggcaccttgcggtcgtatctgctcagtcagcgcctggacgtcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 acgccgtacgcgacgccggcaccttgcggtcgtatctgctcagtcagcgcctggacgtcg 532
Query: 241 accagctacagatggtaa 258
||||||||||||||||||
Sbjct: 533 accagctacagatggtaa 550
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00350 206897 207058 len=162
(162 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218407.1 [gene=esxC] [protein=ESAT-6 li... 129 7e-31
>lcl|NC_000962.2_cdsid_NP_218407.1 [gene=esxC] [protein=ESAT-6 like
protein ESXC] [protein_id=NP_218407.1]
[location=complement(4373726..4374013)]
Length = 288
Score = 129 bits (65), Expect = 7e-31
Identities = 65/65 (100%)
Strand = Plus / Minus
Query: 98 ttagaacaagcccgcgatggcctggtcggttccgatcgcgttgtccagcacgtggccggt 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ttagaacaagcccgcgatggcctggtcggttccgatcgcgttgtccagcacgtggccggt 229
Query: 158 ggtag 162
|||||
Sbjct: 228 ggtag 224
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00354 208818 208690 len=129
(129 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_YP_178024.1 [gene=PPE69] [protein=PPE fami... 256 3e-69
>lcl|NC_000962.2_cdsid_YP_178024.1 [gene=PPE69] [protein=PPE family
protein] [protein_id=YP_178024.1]
[location=complement(4374484..4375683)]
Length = 1200
Score = 256 bits (129), Expect = 3e-69
Identities = 129/129 (100%)
Strand = Plus / Plus
Query: 1 gtgtcgcgtcggcgatcaacaccgccgccaccgcggcgagctggttgggtgtcgggtcgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 gtgtcgcgtcggcgatcaacaccgccgccaccgcggcgagctggttgggtgtcgggtcgg 193
Query: 61 cggcctcggcgcttaacgtcaccatgctcaacgccacgctgcacggactggccggctggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 cggcctcggcgcttaacgtcaccatgctcaacgccacgctgcacggactggccggctggg 253
Query: 121 tcgacgtga 129
|||||||||
Sbjct: 254 tcgacgtga 262
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00355 209263 209030 len=234
(234 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_YP_178025.1 [gene=PE36] [protein=PE family... 464 e-131
>lcl|NC_000962.2_cdsid_YP_178025.1 [gene=PE36] [protein=PE family
protein] [protein_id=YP_178025.1]
[location=complement(4375762..4375995)]
Length = 234
Score = 464 bits (234), Expect = e-131
Identities = 234/234 (100%)
Strand = Plus / Plus
Query: 1 atggtttggtctgtgcaaccagaagcagtgctggcgtcggcagctgccgagtcggcgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggtttggtctgtgcaaccagaagcagtgctggcgtcggcagctgccgagtcggcgatc 60
Query: 61 agtgcggaaaccgaggcagcggccgccggagcggcgccagccctgcttagcaccacgccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agtgcggaaaccgaggcagcggccgccggagcggcgccagccctgcttagcaccacgccg 120
Query: 121 atgggtggtgatcccgactccgcgatgttctccgcagcgctcaacgcgtgcggtgccagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgggtggtgatcccgactccgcgatgttctccgcagcgctcaacgcgtgcggtgccagc 180
Query: 181 tacctgggtgtcgttgccgaacacgccagtcagcgcggcctgttcgcgggttag 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tacctgggtgtcgttgccgaacacgccagtcagcgcggcctgttcgcgggttag 234
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00361 213720 209530 len=4191
(4191 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218411.1 [gene=Rv3894c] [protein=hypoth... 8308 0.0
>lcl|NC_000962.2_cdsid_NP_218411.1 [gene=Rv3894c]
[protein=hypothetical protein] [protein_id=NP_218411.1]
[location=complement(4376262..4380452)]
Length = 4191
Score = 8308 bits (4191), Expect = 0.0
Identities = 4191/4191 (100%)
Strand = Plus / Plus
Query: 1 atgtccaagaaagcgtttcccatcaaccgcgtcaacatcgacccgccgaaacccgttcgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgtccaagaaagcgtttcccatcaaccgcgtcaacatcgacccgccgaaacccgttcgg 60
Query: 61 gtggctccgaatccgccgatagctctgccggagcgcgagccgcgcaacatctgggtgatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtggctccgaatccgccgatagctctgccggagcgcgagccgcgcaacatctgggtgatg 120
Query: 121 atcggcgttcccgcgttgatcgtggcgctgatcggcaccatcgtcatgctgtacgtgtcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atcggcgttcccgcgttgatcgtggcgctgatcggcaccatcgtcatgctgtacgtgtcg 180
Query: 181 ggcgtgcgcagcttggccacggggttcttcccgctgatgggcatcggcgcgttcagcatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgtgcgcagcttggccacggggttcttcccgctgatgggcatcggcgcgttcagcatg 240
Query: 241 ctggcgttctccggacgattcggtcgagcccgcaagatcacctggggtgagttggagaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctggcgttctccggacgattcggtcgagcccgcaagatcacctggggtgagttggagaag 300
Query: 301 gggcgtcgtcgatatcttcgtgacctggacaccaaccgcgacgaaatccagacggcggtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gggcgtcgtcgatatcttcgtgacctggacaccaaccgcgacgaaatccagacggcggtg 360
Query: 361 tgtgcgcaacgtgaatggcagaacgccgtgcattcggacccacccggactgggcgccatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgtgcgcaacgtgaatggcagaacgccgtgcattcggacccacccggactgggcgccatc 420
Query: 421 attggcggtccgcggatgtgggagcgtggccgcggcgacgtcgacttcttagaggtgcgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 attggcggtccgcggatgtgggagcgtggccgcggcgacgtcgacttcttagaggtgcgg 480
Query: 481 gtgggcacgggtgtgcagcacgcaccagattcggtgttgtcggtgacctggccggacatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtgggcacgggtgtgcagcacgcaccagattcggtgttgtcggtgacctggccggacatt 540
Query: 541 tcctccgatgaggagctagagcccgtgaccgggcaggcgctgcgcgatttcatcttggag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tcctccgatgaggagctagagcccgtgaccgggcaggcgctgcgcgatttcatcttggag 600
Query: 601 cagcgcaagattcgcgatatcgccaaggtggtgaacctacggtcggcaccaggcttcagc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cagcgcaagattcgcgatatcgccaaggtggtgaacctacggtcggcaccaggcttcagc 660
Query: 661 ttcgtgagcgaggacctggaccgggtgcggtcgctgatgcggtcggtgttgtgctcgctg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttcgtgagcgaggacctggaccgggtgcggtcgctgatgcggtcggtgttgtgctcgctg 720
Query: 721 gcggtgtttcacaacccgcgtgacgtcaagctgatggtggtgacgcgcaaccgcgaggtg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gcggtgtttcacaacccgcgtgacgtcaagctgatggtggtgacgcgcaaccgcgaggtg 780
Query: 781 tgggcgtggatggtgtggctcccccacaacctgcacgacgagctgttcgatgcctgcggc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tgggcgtggatggtgtggctcccccacaacctgcacgacgagctgttcgatgcctgcggc 840
Query: 841 tggcggcggctgatctttgccacacccgaggaactggaggcggcgctgggagccgagctg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tggcggcggctgatctttgccacacccgaggaactggaggcggcgctgggagccgagctg 900
Query: 901 catatgaagggcaagcgaggcgcatggaccccgccgacggtggccagcccaaccgcgatg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 catatgaagggcaagcgaggcgcatggaccccgccgacggtggccagcccaaccgcgatg 960
Query: 961 ggctcggcgctggaaaccgggcaggtcggcgtggatttggggccgcacctggtgatcgtc 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ggctcggcgctggaaaccgggcaggtcggcgtggatttggggccgcacctggtgatcgtc 1020
Query: 1021 gacgacaacaccggcagcccggatgcgtgggagagcgtggtcgggcaggtcggcaaggcc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gacgacaacaccggcagcccggatgcgtgggagagcgtggtcgggcaggtcggcaaggcc 1080
Query: 1081 gggcttacggtgctgcgcatcgcgtcccgggtgggcaccggtgtggggttcgccgaggac 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gggcttacggtgctgcgcatcgcgtcccgggtgggcaccggtgtggggttcgccgaggac 1140
Query: 1141 caggtcttcgagatggcccaacgacatggggcggcaaccgcggtcaaggccggtcgcgat 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 caggtcttcgagatggcccaacgacatggggcggcaaccgcggtcaaggccggtcgcgat 1200
Query: 1201 ggcgcagacgccgatgacgaccagcgcccggcgccgctgttgcgggcgcgcggcacgttc 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ggcgcagacgccgatgacgaccagcgcccggcgccgctgttgcgggcgcgcggcacgttc 1260
Query: 1261 ttcgcgcatgccgaccagctgtccatccaccgggcctaccgatatgcgcgggcgatggcg 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 ttcgcgcatgccgaccagctgtccatccaccgggcctaccgatatgcgcgggcgatggcg 1320
Query: 1321 cggtggtcaccgaccagtcgcagcgaggtcaccgattccaccagcggcgcggccgagctg 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 cggtggtcaccgaccagtcgcagcgaggtcaccgattccaccagcggcgcggccgagctg 1380
Query: 1381 ctgcgttcgctcggcattagcgacccccgggaattggatgtcgatcggttgtgggccgag 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 ctgcgttcgctcggcattagcgacccccgggaattggatgtcgatcggttgtgggccgag 1440
Query: 1441 cggcgcggtcgcggcgacgatcggtggtgtgagattccggtgggcgccaaaccgaacggc 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 cggcgcggtcgcggcgacgatcggtggtgtgagattccggtgggcgccaaaccgaacggc 1500
Query: 1501 gagctgcagaacatcatcctgcgcgccaaggactttggcggcttcgggtttcactcagtg 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 gagctgcagaacatcatcctgcgcgccaaggactttggcggcttcgggtttcactcagtg 1560
Query: 1561 gtcatcggaaccagcggctcgggcaagtcggagctcttcttgtcgttggtctatgggatc 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 gtcatcggaaccagcggctcgggcaagtcggagctcttcttgtcgttggtctatgggatc 1620
Query: 1621 gcgctgacgcactcaccggaaacattcaacgtcatcttcgtcgacatgaaattcgaatcg 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 gcgctgacgcactcaccggaaacattcaacgtcatcttcgtcgacatgaaattcgaatcg 1680
Query: 1681 gctgcccaggacatcctgggcatcccgcacgtggtggccgcgctatccaacctcggcaaa 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 gctgcccaggacatcctgggcatcccgcacgtggtggccgcgctatccaacctcggcaaa 1740
Query: 1741 gacgagcggcatctggccgagcggatgcgcagagttatcgacggcgagatcaaacagcgc 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 gacgagcggcatctggccgagcggatgcgcagagttatcgacggcgagatcaaacagcgc 1800
Query: 1801 tacgaactgttcaaatcggtaggtgcgcgcgacgccaacgactacgaagagattcgcctc 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 tacgaactgttcaaatcggtaggtgcgcgcgacgccaacgactacgaagagattcgcctc 1860
Query: 1861 gccggacgcgatctgccgccggtgccggtgctgctggtgatcgtcgacgaatacctggag 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 gccggacgcgatctgccgccggtgccggtgctgctggtgatcgtcgacgaatacctggag 1920
Query: 1921 ctgttcgccaaccacaaaaagtggattgatctgatcatccacatcggtcaggagggtcgc 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 ctgttcgccaaccacaaaaagtggattgatctgatcatccacatcggtcaggagggtcgc 1980
Query: 1981 ggcgccaacgtcttcttcatgctaggcggtcaacggctggacctgtcgtcgctgcaaaag 2040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1981 ggcgccaacgtcttcttcatgctaggcggtcaacggctggacctgtcgtcgctgcaaaag 2040
Query: 2041 gtcaagtccaacatcgcgtttcggattgcgctgcgcgctgaatccggtgatgacagccgc 2100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2041 gtcaagtccaacatcgcgtttcggattgcgctgcgcgctgaatccggtgatgacagccgc 2100
Query: 2101 gaagtgatcggcagcgacgccgcctaccatctgccgtcgaaggagaacggtttcgcgctg 2160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2101 gaagtgatcggcagcgacgccgcctaccatctgccgtcgaaggagaacggtttcgcgctg 2160
Query: 2161 ctcaaggtggggccgcgggatctggaaccgttccgctgcttttacctctctgcgccgttt 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2161 ctcaaggtggggccgcgggatctggaaccgttccgctgcttttacctctctgcgccgttt 2220
Query: 2221 gtggtgccgaagaagaaagaggtggcccgaaccatcgacatgacgttgacccaaccccgg 2280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2221 gtggtgccgaagaagaaagaggtggcccgaaccatcgacatgacgttgacccaaccccgg 2280
Query: 2281 ctgtacgactggcagtaccaaccgctggatgccgccgacgccgaggcattggcgaccgcc 2340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2281 ctgtacgactggcagtaccaaccgctggatgccgccgacgccgaggcattggcgaccgcc 2340
Query: 2341 gcggccgccgatgcggaacccgacgaattcctctattacgacgacggtttcaagaagaag 2400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2341 gcggccgccgatgcggaacccgacgaattcctctattacgacgacggtttcaagaagaag 2400
Query: 2401 aagatcgtcgacgtgctgcgggagtcgctatacaacgtgccgcaccgatcgccgcgccgg 2460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2401 aagatcgtcgacgtgctgcgggagtcgctatacaacgtgccgcaccgatcgccgcgccgg 2460
Query: 2461 ccgtggttggcgccgctggaagaccccgagccggtcgataggctggtggctgcgtatcgt 2520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2461 ccgtggttggcgccgctggaagaccccgagccggtcgataggctggtggctgcgtatcgt 2520
Query: 2521 ggcaaaccctggcatgtcgactacggtcaaaacccgggactgatgttcccggtgggagtg 2580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2521 ggcaaaccctggcatgtcgactacggtcaaaacccgggactgatgttcccggtgggagtg 2580
Query: 2581 atggacatccccgaagaatcccagcaagtggtacacgccgtcgacgcgctacgcagcaac 2640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2581 atggacatccccgaagaatcccagcaagtggtacacgccgtcgacgcgctacgcagcaac 2640
Query: 2641 atcatcgtggtgggcgccaagcagcgcggcaagaccacaaccttgatggcgctgatgtgt 2700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2641 atcatcgtggtgggcgccaagcagcgcggcaagaccacaaccttgatggcgctgatgtgt 2700
Query: 2701 tcggcggcaacgatgtacaccccggagcgagtgacgttcttttgcatcggcggggcgacc 2760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2701 tcggcggcaacgatgtacaccccggagcgagtgacgttcttttgcatcggcggggcgacc 2760
Query: 2761 atggcccagattgggtcgcttccacacgttaccgatatcgtgtcgcccaaggatgccgag 2820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2761 atggcccagattgggtcgcttccacacgttaccgatatcgtgtcgcccaaggatgccgag 2820
Query: 2821 ggcatcgaacgcatcttgagcaccatggatgcgctgatcgatgcgcgggaagaggcgttt 2880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2821 ggcatcgaacgcatcttgagcaccatggatgcgctgatcgatgcgcgggaagaggcgttt 2880
Query: 2881 cggcgagccaagatcgacatggacgggttccgcgagcgccggttcgggatcggcggcgac 2940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2881 cggcgagccaagatcgacatggacgggttccgcgagcgccggttcgggatcggcggcgac 2940
Query: 2941 ggggtgggtggcaccgatcccaccgacgcgttcggcgatgtctttgtggtgctcgacgac 3000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2941 ggggtgggtggcaccgatcccaccgacgcgttcggcgatgtctttgtggtgctcgacgac 3000
Query: 3001 tacgacgacctgtacgccaaggacaccctgttgggggaccgcatcatctcgttgagcagc 3060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3001 tacgacgacctgtacgccaaggacaccctgttgggggaccgcatcatctcgttgagcagc 3060
Query: 3061 cgcggtcccgaatacggggtgcacctgatgtgcagtgccggcggctggattcatgggcag 3120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3061 cgcggtcccgaatacggggtgcacctgatgtgcagtgccggcggctggattcatgggcag 3120
Query: 3121 cggcagagcctgctgcagaatgtcacggcgcgaattcagttgcggctggccgatcccggt 3180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3121 cggcagagcctgctgcagaatgtcacggcgcgaattcagttgcggctggccgatcccggt 3180
Query: 3181 gagagccagatggggcatttgtcgatcgaatcgcgggaggcggcgcggcggacgttgaac 3240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3181 gagagccagatggggcatttgtcgatcgaatcgcgggaggcggcgcggcggacgttgaac 3240
Query: 3241 cgcccaggatttggtttgacggaaagcctgcacgagctgcgaatcggtgttccggccctg 3300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3241 cgcccaggatttggtttgacggaaagcctgcacgagctgcgaatcggtgttccggccctg 3300
Query: 3301 gccgaccccggtaccggcgagctggtgggcatcaccgatgtcggggcgcgaatcgccgac 3360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3301 gccgaccccggtaccggcgagctggtgggcatcaccgatgtcggggcgcgaatcgccgac 3360
Query: 3361 gtggccggggtgaccaagcacgcaagtctgcagcggctgccacagcgggtggaactgtcc 3420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3361 gtggccggggtgaccaagcacgcaagtctgcagcggctgccacagcgggtggaactgtcc 3420
Query: 3421 gcgattgtcgagcacgaggccgtccaccagggcggtgacgatctgtcgatcgcgtttgcg 3480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3421 gcgattgtcgagcacgaggccgtccaccagggcggtgacgatctgtcgatcgcgtttgcg 3480
Query: 3481 atcggagagcgccacgagctgggtccggtgccgatcaagctgcgcgagagcccagggttg 3540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3481 atcggagagcgccacgagctgggtccggtgccgatcaagctgcgcgagagcccagggttg 3540
Query: 3541 atgatcttaggtcggcaaggctgcggcaagaccacggcgctggtggccatcggcgaggcg 3600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3541 atgatcttaggtcggcaaggctgcggcaagaccacggcgctggtggccatcggcgaggcg 3600
Query: 3601 gtgatgaaccggttcagcccgcagcaggcgcagctcacgctgatcgaccctaaaacggct 3660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3601 gtgatgaaccggttcagcccgcagcaggcgcagctcacgctgatcgaccctaaaacggct 3660
Query: 3661 ccgcacggtctgcgagatctgcacgcccctgggtatgtgcgcgcgtatgcctacgaccaa 3720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3661 ccgcacggtctgcgagatctgcacgcccctgggtatgtgcgcgcgtatgcctacgaccaa 3720
Query: 3721 gatgaaatcgacgaggtgatcaccgagttggcccagcagatcttgctgccgcggttgccg 3780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3721 gatgaaatcgacgaggtgatcaccgagttggcccagcagatcttgctgccgcggttgccg 3780
Query: 3781 cccaagggtttgagccaggaggagttgcgcgcactcaagccgtgggaaggaccgcggcac 3840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3781 cccaagggtttgagccaggaggagttgcgcgcactcaagccgtgggaaggaccgcggcac 3840
Query: 3841 tttgtgctcatcgacgacgtgcaggacctgcggccggctcagagctacccacagaagccg 3900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3841 tttgtgctcatcgacgacgtgcaggacctgcggccggctcagagctacccacagaagccg 3900
Query: 3901 ccggtgggtgcggcgctgtggaagttgatggaacgcgcccgccaggtcggtttgcacgta 3960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3901 ccggtgggtgcggcgctgtggaagttgatggaacgcgcccgccaggtcggtttgcacgta 3960
Query: 3961 ttcagcacgcgcaacagcgcgaactgggccacgatgccgatggacccctgggtgaaatcc 4020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3961 ttcagcacgcgcaacagcgcgaactgggccacgatgccgatggacccctgggtgaaatcc 4020
Query: 4021 cagacctcggcgaaagtggcccagttgtatatggataacgatccgcaaaaccgaatcaat 4080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4021 cagacctcggcgaaagtggcccagttgtatatggataacgatccgcaaaaccgaatcaat 4080
Query: 4081 cgatcggtgcgagcccaaacgttgccgcctggacgaggtctgttggtcggtgccgacggc 4140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4081 cgatcggtgcgagcccaaacgttgccgcctggacgaggtctgttggtcggtgccgacggc 4140
Query: 4141 gacgtcgaggggattttggtggggtatccgtcggtgcccggcgagcagtag 4191
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4141 gacgtcgaggggattttggtggggtatccgtcggtgcccggcgagcagtag 4191
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00362 215322 213721 len=1602
(1602 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218412.1 [gene=Rv3895c] [protein=hypoth... 2950 0.0
lcl|NC_000962.2_cdsid_NP_218413.1 [gene=Rv3896c] [protein=hypoth... 222 7e-58
>lcl|NC_000962.2_cdsid_NP_218412.1 [gene=Rv3895c]
[protein=hypothetical protein] [protein_id=NP_218412.1]
[location=complement(4380453..4381940)]
Length = 1488
Score = 2950 bits (1488), Expect = 0.0
Identities = 1488/1488 (100%)
Strand = Plus / Plus
Query: 115 atgccgctgagtttgtccaaccgcgaccaaaattccggtcatctgttctacaaccggcgg 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgccgctgagtttgtccaaccgcgaccaaaattccggtcatctgttctacaaccggcgg 60
Query: 175 ctgcgggcggcgaccacccggttctcggtgcgcatgaaacacgacgaccgcaagcagacc 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgcgggcggcgaccacccggttctcggtgcgcatgaaacacgacgaccgcaagcagacc 120
Query: 235 gccgcgctggcgttgtcgatggtgttggtggccattgccgccggatggatgatgctgctc 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gccgcgctggcgttgtcgatggtgttggtggccattgccgccggatggatgatgctgctc 180
Query: 295 aacgtgctcaagcccaccggcattgtgggtgactcggcgatcatcggggaccgcgactcc 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aacgtgctcaagcccaccggcattgtgggtgactcggcgatcatcggggaccgcgactcc 240
Query: 355 ggggcactctacgcgcgcatcgacggccggttgtatccggcgctgaacttgacgtccgcg 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggggcactctacgcgcgcatcgacggccggttgtatccggcgctgaacttgacgtccgcg 300
Query: 415 cggctggccaccggcacggcggggcagccgacatgggtcaagcccgccgagatcgccaag 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cggctggccaccggcacggcggggcagccgacatgggtcaagcccgccgagatcgccaag 360
Query: 475 tatccgaccgggccgctggtcggcatcccgggcgcacccgcggccatgccggtgaaccgg 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tatccgaccgggccgctggtcggcatcccgggcgcacccgcggccatgccggtgaaccgg 420
Query: 535 ggcgcggtctcggcgtgggcggtgtgcgacacggcgggacgcccgcgcagcgcggacaag 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggcgcggtctcggcgtgggcggtgtgcgacacggcgggacgcccgcgcagcgcggacaag 480
Query: 595 ccggtggtcacctcgatcgcgggcccgatcaccggcggtggccgcgccacacacctgcgc 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccggtggtcacctcgatcgcgggcccgatcaccggcggtggccgcgccacacacctgcgc 540
Query: 655 gacgacgccgggctgctggtgactttcgacggcagcacctacgtgatctggggtggcaaa 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gacgacgccgggctgctggtgactttcgacggcagcacctacgtgatctggggtggcaaa 600
Query: 715 cgctcacagatcgatccgaccaacagggcggtcaccttgagcttggggctcgaccccggc 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cgctcacagatcgatccgaccaacagggcggtcaccttgagcttggggctcgaccccggc 660
Query: 775 gtgacatcaccaatacagatctcacgggcgctcttcgacgggctgcccgcgaccgagccg 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gtgacatcaccaatacagatctcacgggcgctcttcgacgggctgcccgcgaccgagccg 720
Query: 835 ctgcgggtgccagcggtgcccgaggcgggcaccccgtcgacgtgggtgccgggcgctcgg 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ctgcgggtgccagcggtgcccgaggcgggcaccccgtcgacgtgggtgccgggcgctcgg 780
Query: 895 gtgggatcggtgttgcaggcccaaaccgccggcgggggcagccagttctatgtgctgctg 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gtgggatcggtgttgcaggcccaaaccgccggcgggggcagccagttctatgtgctgctg 840
Query: 955 cccgacggggtgcaaaagatcagcagcttcgtggccgatctgctgcgcagcgcgaactcc 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 cccgacggggtgcaaaagatcagcagcttcgtggccgatctgctgcgcagcgcgaactcc 900
Query: 1015 tacggggcggcggcgccgcgggtggtgacccccgatgtgctggtccacacaccgcaggtg 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 tacggggcggcggcgccgcgggtggtgacccccgatgtgctggtccacacaccgcaggtg 960
Query: 1075 acctcgctgccggtggagtactacccggccgggcggctgaatttcgttgacaccgcggcg 1134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 acctcgctgccggtggagtactacccggccgggcggctgaatttcgttgacaccgcggcg 1020
Query: 1135 gatccgaccacctgcgtgtcgtgggagaaggcgtcgacggatccacaggcccgggtcgcg 1194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gatccgaccacctgcgtgtcgtgggagaaggcgtcgacggatccacaggcccgggtcgcg 1080
Query: 1195 gtctacaacgggcgggggcttccggtgcccccgtcgatggacagccggatcgtgcggctg 1254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gtctacaacgggcgggggcttccggtgcccccgtcgatggacagccggatcgtgcggctg 1140
Query: 1255 gtacgcgatgaccgcgccccggcgtcggtggtggccacccaggtgctggtgttgcccggc 1314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gtacgcgatgaccgcgccccggcgtcggtggtggccacccaggtgctggtgttgcccggc 1200
Query: 1315 gcggccaacttcgtgacatcgaccagcggtgtgatcaccgccgagtcgcgcgaatcgttg 1374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 gcggccaacttcgtgacatcgaccagcggtgtgatcaccgccgagtcgcgcgaatcgttg 1260
Query: 1375 ttctgggtgtccggcaatggggtgcgattcgggatcgccaacgacgaggcgacgctgcgg 1434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 ttctgggtgtccggcaatggggtgcgattcgggatcgccaacgacgaggcgacgctgcgg 1320
Query: 1435 gcgctgggcctggatccgggtgcggccgtgcaggcgccgtggccgttgctgcggactttt 1494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 gcgctgggcctggatccgggtgcggccgtgcaggcgccgtggccgttgctgcggactttt 1380
Query: 1495 gctgcgggaccggctctgtcgcgggatgcggcactcttggctcgcgatactgtgcccacc 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 gctgcgggaccggctctgtcgcgggatgcggcactcttggctcgcgatactgtgcccacc 1440
Query: 1555 ctcggccaggtggccattgtgacgacaacggcgaaggcgggcgcctag 1602
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 ctcggccaggtggccattgtgacgacaacggcgaaggcgggcgcctag 1488
>lcl|NC_000962.2_cdsid_NP_218413.1 [gene=Rv3896c]
[protein=hypothetical protein] [protein_id=NP_218413.1]
[location=complement(4381943..4382851)]
Length = 909
Score = 222 bits (112), Expect = 7e-58
Identities = 112/112 (100%)
Strand = Plus / Plus
Query: 1 atgcgcgttcatcaactacgcgagaggccactacggggtggccgccgacgcatcgaatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 atgcgcgttcatcaactacgcgagaggccactacggggtggccgccgacgcatcgaatct 857
Query: 61 ggccgatctgatccagcaggccgatcctcgccgcagccccagggggtattga 112
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 ggccgatctgatccagcaggccgatcctcgccgcagccccagggggtattga 909
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00364 216782 216276 len=507
(507 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218414.1 [gene=Rv3897c] [protein=hypoth... 1005 0.0
lcl|NC_000962.2_cdsid_NP_216599.1 [gene=Rv2083] [protein=hypothe... 98 8e-21
>lcl|NC_000962.2_cdsid_NP_218414.1 [gene=Rv3897c]
[protein=hypothetical protein] [protein_id=NP_218414.1]
[location=complement(4383008..4383640)]
Length = 633
Score = 1005 bits (507), Expect = 0.0
Identities = 507/507 (100%)
Strand = Plus / Plus
Query: 1 atgagtgcgcttcaacagacctatggcgcggagggactggacgtcgcggacggggcgcgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 atgagtgcgcttcaacagacctatggcgcggagggactggacgtcgcggacggggcgcgg 186
Query: 61 ctggtggacagcatcgaaggtgagcccggcctcggcggcgagccgggcgctggtgacgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 ctggtggacagcatcgaaggtgagcccggcctcggcggcgagccgggcgctggtgacgtc 246
Query: 121 ggcgccggcggcgggggtggtggcaccaccccgacgggctatctgggtcccccacccgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ggcgccggcggcgggggtggtggcaccaccccgacgggctatctgggtcccccacccgtg 306
Query: 181 ccgacgtcgtcgccaccgacgactccagccggggcgccggccaagtcggtgacgccggac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ccgacgtcgtcgccaccgacgactccagccggggcgccggccaagtcggtgacgccggac 366
Query: 241 ccggttagtggcaccccgcgggcgtcggggccggccggcatgaccggcatgccgatggtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ccggttagtggcaccccgcgggcgtcggggccggccggcatgaccggcatgccgatggtg 426
Query: 301 ccgccgggcgcgttgggtgcgggcgcggaaggagccaataaggacaagccggtcgagaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ccgccgggcgcgttgggtgcgggcgcggaaggagccaataaggacaagccggtcgagaag 486
Query: 361 cgggtgacgggctgtgccgaatggtcaaccggtcaagggccgcttaacagtaccgccgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 cgggtgacgggctgtgccgaatggtcaaccggtcaagggccgcttaacagtaccgccgag 546
Query: 421 tgttccggtgaaatctgccgacgacaagccggtggtcaccaagtcgacgcgacggatcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tgttccggtgaaatctgccgacgacaagccggtggtcaccaagtcgacgcgacggatcct 606
Query: 481 tgttgtgccgaacgacgacaaggttaa 507
|||||||||||||||||||||||||||
Sbjct: 607 tgttgtgccgaacgacgacaaggttaa 633
>lcl|NC_000962.2_cdsid_NP_216599.1 [gene=Rv2083]
[protein=hypothetical protein] [protein_id=NP_216599.1]
[location=2340871..2341815]
Length = 945
Score = 97.6 bits (49), Expect = 8e-21
Identities = 153/187 (81%), Gaps = 3/187 (1%)
Strand = Plus / Plus
Query: 48 ggacggggcgcggctggtggacagcatcgaaggtgagcccggcctcggcggcgagccggg 107
|||||||||||||||| |||||||||||| || |||||||| || ||| ||| | ||
Sbjct: 453 ggacggggcgcggctgctggacagcatcgggggcgagcccggtcttggcagcggtgcagg 512
Query: 108 cgctggtgacgtcggcgccggcggcgggggtggtggcaccaccccgacgggctatctggg 167
| ||||||||||| | ||| |||| ||| ||||| ||||| || |||||||||||
Sbjct: 513 tggcggtgacgtcgggggcgggggcgc---tggcggcactacccccaccggctatctggg 569
Query: 168 tcccccacccgtgccgacgtcgtcgccaccgacgactccagccggggcgccggccaagtc 227
||| |||||||| ||||||||||| || ||||||||||| || ||||| ||| |||||||
Sbjct: 570 tccaccacccgtaccgacgtcgtcaccgccgacgactcccgcgggggcaccgaccaagtc 629
Query: 228 ggtgacg 234
|| ||||
Sbjct: 630 ggcgacg 636
Score = 52.0 bits (26), Expect = 4e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 284 ccggcatgccgatggtgccgccgggcgcgttggg 317
|||| |||||||||||||||||||||||| ||||
Sbjct: 686 ccgggatgccgatggtgccgccgggcgcgatggg 719
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00368 218728 217415 len=1314
(1314 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218416.1 [gene=Rv3899c] [protein=hypoth... 2444 0.0
lcl|NC_000962.2_cdsid_NP_218417.1 [gene=Rv3900c] [protein=hypoth... 174 1e-43
lcl|NC_000962.2_cdsid_NP_216598.1 [gene=Rv2082] [protein=hypothe... 52 1e-06
>lcl|NC_000962.2_cdsid_NP_218416.1 [gene=Rv3899c]
[protein=hypothetical protein] [protein_id=NP_218416.1]
[location=complement(4384147..4385379)]
Length = 1233
Score = 2444 bits (1233), Expect = 0.0
Identities = 1233/1233 (100%)
Strand = Plus / Plus
Query: 82 atggtgacggggcaaccggccgcggctggcgcgcattcgctgtcggaaggggcaatgacg 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggtgacggggcaaccggccgcggctggcgcgcattcgctgtcggaaggggcaatgacg 60
Query: 142 gcgatgcagtcggggtcggttcccccgccgcaggccactcctccgataacgacaccgccc 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcgatgcagtcggggtcggttcccccgccgcaggccactcctccgataacgacaccgccc 120
Query: 202 gtggtgtctgcgccgaccatggctgcgggcatcgaagccacacacgggccagttgacacg 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtggtgtctgcgccgaccatggctgcgggcatcgaagccacacacgggccagttgacacg 180
Query: 262 ccggcgaacacctcgggcgctccaccggcgtcgaccggtactaccgggccggtcgcgccg 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccggcgaacacctcgggcgctccaccggcgtcgaccggtactaccgggccggtcgcgccg 240
Query: 322 accgtggtgaccgccgggccggtggcggcacccgctgcgccggtggttggtggctcggct 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 accgtggtgaccgccgggccggtggcggcacccgctgcgccggtggttggtggctcggct 300
Query: 382 gtccccgcgggaccgctgccggcttacggctctgatctacggccccccgtcgtggcagcc 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtccccgcgggaccgctgccggcttacggctctgatctacggccccccgtcgtggcagcc 360
Query: 442 cccgccgtgccctcggttcctacggcgcccgtatccggcgcgccggtggcgccctcggcg 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cccgccgtgccctcggttcctacggcgcccgtatccggcgcgccggtggcgccctcggcg 420
Query: 502 tcatcggccccatcggcgggtggggcgctggtttctccggtggagcgcgcagcctcgaaa 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcatcggccccatcggcgggtggggcgctggtttctccggtggagcgcgcagcctcgaaa 480
Query: 562 gctgtggctggacaggctggtgcgagctcgtcgacaatggccggcgcctcggcactgtcg 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gctgtggctggacaggctggtgcgagctcgtcgacaatggccggcgcctcggcactgtcg 540
Query: 622 gccaccgccggcgcgacggcgggcgcggtatcggctcgggcggctgagcagcaacgccta 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gccaccgccggcgcgacggcgggcgcggtatcggctcgggcggctgagcagcaacgccta 600
Query: 682 cagcgaatcgtggatgccgtggcgcgccaggagccgcgaatctcatgggcggccgggctg 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cagcgaatcgtggatgccgtggcgcgccaggagccgcgaatctcatgggcggccgggctg 660
Query: 742 cgcgacgacggcaccaccaccctgctggtcaccgatttggccggcgggtggattccgccc 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgcgacgacggcaccaccaccctgctggtcaccgatttggccggcgggtggattccgccc 720
Query: 802 cacgtccggctgcccgcgaacgtgacgctgctggagccaaccgcgcgacgccgtgatgcc 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cacgtccggctgcccgcgaacgtgacgctgctggagccaaccgcgcgacgccgtgatgcc 780
Query: 862 gacgtgatcgacttgctgggcgccgtcgtcgccgtggcagcccacgagtccaacacctac 921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gacgtgatcgacttgctgggcgccgtcgtcgccgtggcagcccacgagtccaacacctac 840
Query: 922 gttgccgagccggggccagatgcgcctgcgctgaccggtgatcggtcagcgcgctcggcg 981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gttgccgagccggggccagatgcgcctgcgctgaccggtgatcggtcagcgcgctcggcg 900
Query: 982 atacccaaggtggacgagttcgggccgaccttggtcgaagctgtgcgccgccgcgatagc 1041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 atacccaaggtggacgagttcgggccgaccttggtcgaagctgtgcgccgccgcgatagc 960
Query: 1042 ctgccgcggatcgcgcaggcgatcgcgctgccggcggtacgcaaaaccggcgtgctggaa 1101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ctgccgcggatcgcgcaggcgatcgcgctgccggcggtacgcaaaaccggcgtgctggaa 1020
Query: 1102 aacgaagccgagctgctgcacggctgcatcaccgcggtcaaggagtcggtgctcaaggcc 1161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 aacgaagccgagctgctgcacggctgcatcaccgcggtcaaggagtcggtgctcaaggcc 1080
Query: 1162 tatcccagtcacgagctcaccgctgtcggggattggatgctgctggcggcgatcgaggca 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 tatcccagtcacgagctcaccgctgtcggggattggatgctgctggcggcgatcgaggca 1140
Query: 1222 ctgatcgacgagcaggactacctcgccaactatcacctggcctggtatgccgtaaccacc 1281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 ctgatcgacgagcaggactacctcgccaactatcacctggcctggtatgccgtaaccacc 1200
Query: 1282 aggcgtggcggctcacgagggttcgctgcctga 1314
|||||||||||||||||||||||||||||||||
Sbjct: 1201 aggcgtggcggctcacgagggttcgctgcctga 1233
>lcl|NC_000962.2_cdsid_NP_218417.1 [gene=Rv3900c]
[protein=hypothetical protein] [protein_id=NP_218417.1]
[location=complement(4385373..4386308)]
Length = 936
Score = 174 bits (88), Expect = 1e-43
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 1 atgcccggcgggtcgctgtcgccggcggccctcggacagggcgtatcgcctacgtcgatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 atgcccggcgggtcgctgtcgccggcggccctcggacagggcgtatcgcctacgtcgatt 908
Query: 61 gggcaatcgtttgcgaccgggatggtga 88
||||||||||||||||||||||||||||
Sbjct: 909 gggcaatcgtttgcgaccgggatggtga 936
>lcl|NC_000962.2_cdsid_NP_216598.1 [gene=Rv2082] [protein=hypothetical
protein] [protein_id=NP_216598.1]
[location=2338709..2340874]
Length = 2166
Score = 52.0 bits (26), Expect = 1e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 727 tgggcggccgggctgcgcgacgacggcaccaccaccctgctggtcaccga 776
||||| |||||||| |||||| ||||| ||||||||||||||||||||
Sbjct: 1594 tgggctgccgggctacgcgacaacggccaaaccaccctgctggtcaccga 1643
Score = 50.1 bits (25), Expect = 4e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1192 gattggatgctgctggcggcgatcgaggcactgatcg 1228
|||||||||||| ||||||||||| | ||||||||||
Sbjct: 2056 gattggatgctgttggcggcgatcaacgcactgatcg 2092
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00370 219578 219432 len=147
(147 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218417.1 [gene=Rv3900c] [protein=hypoth... 287 1e-78
>lcl|NC_000962.2_cdsid_NP_218417.1 [gene=Rv3900c]
[protein=hypothetical protein] [protein_id=NP_218417.1]
[location=complement(4385373..4386308)]
Length = 936
Score = 287 bits (145), Expect = 1e-78
Identities = 145/145 (100%)
Strand = Plus / Plus
Query: 3 gtggtggcggctgatcttccgcccggtaggtggagcgcggtgctggtggggccgtggtgg 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggtggcggctgatcttccgcccggtaggtggagcgcggtgctggtggggccgtggtgg 60
Query: 63 ccggccccgtcggcggccctacgtgccgccgcgcaacactgggccacttgggccatgcaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccggccccgtcggcggccctacgtgccgccgcgcaacactgggccacttgggccatgcaa 120
Query: 123 aagcaagagctcgcaaggaatctga 147
|||||||||||||||||||||||||
Sbjct: 121 aagcaagagctcgcaaggaatctga 145
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00372 219715 219563 len=153
(153 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218418.1 [gene=Rv3901c] [protein=hypoth... 165 1e-41
>lcl|NC_000962.2_cdsid_NP_218418.1 [gene=Rv3901c]
[protein=hypothetical protein] [protein_id=NP_218418.1]
[location=complement(4386365..4386814)]
Length = 450
Score = 165 bits (83), Expect = 1e-41
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 1 atgccaaacaccgcgacgccgcgcgcgctagcgaccgcttaccgcacaacgatcgtaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 atgccaaacaccgcgacgccgcgcgcgctagcgaccgcttaccgcacaacgatcgtaatg 427
Query: 61 gcgagtggtggcactcaagctga 83
|||||||||||||||||||||||
Sbjct: 428 gcgagtggtggcactcaagctga 450
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00373 219999 219805 len=195
(195 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218418.1 [gene=Rv3901c] [protein=hypoth... 387 e-108
>lcl|NC_000962.2_cdsid_NP_218418.1 [gene=Rv3901c]
[protein=hypothetical protein] [protein_id=NP_218418.1]
[location=complement(4386365..4386814)]
Length = 450
Score = 387 bits (195), Expect = e-108
Identities = 195/195 (100%)
Strand = Plus / Plus
Query: 1 ttggcccgccatcgtggtggccgcgatcgctgctgtggtggcggtcgctgcgctgatcgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 ttggcccgccatcgtggtggccgcgatcgctgctgtggtggcggtcgctgcgctgatcgt 143
Query: 61 ggccctgacaaacgccaggcccgcggctacaccggctacgacctcggtgcctacctacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 ggccctgacaaacgccaggcccgcggctacaccggctacgacctcggtgcctacctacac 203
Query: 121 cgctgcccagactgccgcggctcagcggcaattgtgcgacacatacaagctggtggccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 cgctgcccagactgccgcggctcagcggcaattgtgcgacacatacaagctggtggccca 263
Query: 181 tgctgtaccagttga 195
|||||||||||||||
Sbjct: 264 tgctgtaccagttga 278
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00377 223700 221160 len=2541
(2541 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218420.1 [gene=Rv3903c] [protein=hypoth... 5037 0.0
>lcl|NC_000962.2_cdsid_NP_218420.1 [gene=Rv3903c]
[protein=hypothetical protein] [protein_id=NP_218420.1]
[location=complement(4387892..4390432)]
Length = 2541
Score = 5037 bits (2541), Expect = 0.0
Identities = 2541/2541 (100%)
Strand = Plus / Plus
Query: 1 atggcgccgttggcggtcgatcccgcggcccttgatagcgcgggcggcgcggtggtggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggcgccgttggcggtcgatcccgcggcccttgatagcgcgggcggcgcggtggtggct 60
Query: 61 gcgggtgcgggtttgggtgcggtgatctcgtcgctgaccgcggcgctggccgggtgtgcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcgggtgcgggtttgggtgcggtgatctcgtcgctgaccgcggcgctggccgggtgtgcg 120
Query: 121 gggatggccggtgatgatccggctggggcggtgttcgggcgctcctatgacggttcggcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gggatggccggtgatgatccggctggggcggtgttcgggcgctcctatgacggttcggcg 180
Query: 181 gccgcgctggtgcaggcgatgtcggtggcgcgcaacggattgtgcaacctcggcgatggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gccgcgctggtgcaggcgatgtcggtggcgcgcaacggattgtgcaacctcggcgatggg 240
Query: 241 gtgcgcatgagcgcgcacaactactcgttggccgaggcgatgtcggatgtcgctgggcgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtgcgcatgagcgcgcacaactactcgttggccgaggcgatgtcggatgtcgctgggcgg 300
Query: 301 gcggcgccgttgccggcgccgccgccgagcggctgtgtcggcgtgggtgcgccgccgtcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcggcgccgttgccggcgccgccgccgagcggctgtgtcggcgtgggtgcgccgccgtcg 360
Query: 361 gcggtcggtggcggcggtggcgccccgaagggctgggggtgggtggccccgtatatcggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcggtcggtggcggcggtggcgccccgaagggctgggggtgggtggccccgtatatcggg 420
Query: 421 atgatctggccgaacggggattcgacaaagctacgtgcggcggctgtggcgtggcgcagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atgatctggccgaacggggattcgacaaagctacgtgcggcggctgtggcgtggcgcagc 480
Query: 481 gcgggcacgcagttcgcgctgactgagattcagtcgacggcggggccgatgggcgttatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gcgggcacgcagttcgcgctgactgagattcagtcgacggcggggccgatgggcgttatt 540
Query: 541 cgcgcccagcagctcccggaggcggggctgatcgagtcggcgtttgctgacgcgtacgcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cgcgcccagcagctcccggaggcggggctgatcgagtcggcgtttgctgacgcgtacgcc 600
Query: 601 agcaccaccgctgtcgtgggccaatgccaccagctggcggcccagctagacgcctatgcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agcaccaccgctgtcgtgggccaatgccaccagctggcggcccagctagacgcctatgcc 660
Query: 661 gcccgcatcgacgcggtgcatgcggcggtcctggatttgttggcccgcatctgcgatccg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gcccgcatcgacgcggtgcatgcggcggtcctggatttgttggcccgcatctgcgatccg 720
Query: 721 ctgaccgggatcaaagaggtgtgggagtttctgaccgaccaggacgaagacgagatccag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ctgaccgggatcaaagaggtgtgggagtttctgaccgaccaggacgaagacgagatccag 780
Query: 781 cgcatcgcccatgacatcgcggtggtggtcgaccagttcagcggggaagtggacgcgttg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 cgcatcgcccatgacatcgcggtggtggtcgaccagttcagcggggaagtggacgcgttg 840
Query: 841 gctgcggagatcaccgcggtggtgtcgcacgccgaggcggtgatcaccgcgatggcagac 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gctgcggagatcaccgcggtggtgtcgcacgccgaggcggtgatcaccgcgatggcagac 900
Query: 901 cacgcaggcaaacaatgggatcggttcttgcacagcaacccggtgggtgtggtcatcgat 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 cacgcaggcaaacaatgggatcggttcttgcacagcaacccggtgggtgtggtcatcgat 960
Query: 961 ggcaccgggcagcagctcaaaggcttcggcgaggaggccttcgggatggccaaggactcc 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ggcaccgggcagcagctcaaaggcttcggcgaggaggccttcgggatggccaaggactcc 1020
Query: 1021 tgggacctagggccactgcgcgcctcgatagacccgttcgggtggtatcgctcctgggag 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 tgggacctagggccactgcgcgcctcgatagacccgttcgggtggtatcgctcctgggag 1080
Query: 1081 gagatgctgactgggatggcgccgctggcgggcctgggcggcgagaacgctcccggcgtt 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gagatgctgactgggatggcgccgctggcgggcctgggcggcgagaacgctcccggcgtt 1140
Query: 1141 gtggagtcgtggaagcagttcggcaaaagcctcatccattgggatgagtggacgaccaac 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gtggagtcgtggaagcagttcggcaaaagcctcatccattgggatgagtggacgaccaac 1200
Query: 1201 cctaatgaggcgctaggcaagaccgtattcgacgccgcgacgctagctttgccgggcggg 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 cctaatgaggcgctaggcaagaccgtattcgacgccgcgacgctagctttgccgggcggg 1260
Query: 1261 ccgctgtcgaaacttggcagcaagggccgcgacattctcgcgggcgtgcgaggcctcaag 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 ccgctgtcgaaacttggcagcaagggccgcgacattctcgcgggcgtgcgaggcctcaag 1320
Query: 1321 gagcggcttgagccgacgacaccgcaccttgagcccccagcaacgccgccgcggccagga 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 gagcggcttgagccgacgacaccgcaccttgagcccccagcaacgccgccgcggccagga 1380
Query: 1381 ccgcaaccaccacggatcgaaccaccagaatcgggccacccggcacccgcgcccgcggcg 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 ccgcaaccaccacggatcgaaccaccagaatcgggccacccggcacccgcgcccgcggcg 1440
Query: 1441 aaaccggcgcccgtgcccgccaacggtccactgccgcacagccccaccgaatccaaaccg 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 aaaccggcgcccgtgcccgccaacggtccactgccgcacagccccaccgaatccaaaccg 1500
Query: 1501 ccgcccgtcgacagaccggctgaaccggtggcgccgtcgtcggcgtcggcaggccagccc 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 ccgcccgtcgacagaccggctgaaccggtggcgccgtcgtcggcgtcggcaggccagccc 1560
Query: 1561 cgggtatccgcagccaccacgcccggcacacatgtgccgcatggcctgccgcaaccgggt 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 cgggtatccgcagccaccacgcccggcacacatgtgccgcatggcctgccgcaaccgggt 1620
Query: 1621 gaacatgtcccggcgcaagcaccaccggcgacgacgttgcttggcggacctcctgtcgag 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 gaacatgtcccggcgcaagcaccaccggcgacgacgttgcttggcggacctcctgtcgag 1680
Query: 1681 tcagcgcccgctaccgcgcaccaaccccagtgggcgaccacaccagcagcacccgcggcg 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 tcagcgcccgctaccgcgcaccaaccccagtgggcgaccacaccagcagcacccgcggcg 1740
Query: 1741 gcgccgcattccacgcccggaggcgttcactcaaccgaatcggggcctcacggccgatca 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 gcgccgcattccacgcccggaggcgttcactcaaccgaatcggggcctcacggccgatca 1800
Query: 1801 ctgagcgcacacggatccgagccgacccacgacggtgcgtctcacgggtcaggccacggt 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 ctgagcgcacacggatccgagccgacccacgacggtgcgtctcacgggtcaggccacggt 1860
Query: 1861 agcggtagcgagccacctgggctgcatgcgccgcatcgcgagcagcagcttgcaatgcat 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 agcggtagcgagccacctgggctgcatgcgccgcatcgcgagcagcagcttgcaatgcat 1920
Query: 1921 tcgaacgaaccagctggagagggttggcatcggttatccgacgaagcggttgacccgcag 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 tcgaacgaaccagctggagagggttggcatcggttatccgacgaagcggttgacccgcag 1980
Query: 1981 tatggcgagccattatcgcgccactgggactttacagacaatccggccgatcgcagtcgg 2040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1981 tatggcgagccattatcgcgccactgggactttacagacaatccggccgatcgcagtcgg 2040
Query: 2041 ataaacccggttgtggcccagctcatggaggaccccaacgccccattcggccgcgatcct 2100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2041 ataaacccggttgtggcccagctcatggaggaccccaacgccccattcggccgcgatcct 2100
Query: 2101 cagggacagccctatacccaagaacggtatcaagagcgatttaatagtgtaggcccatgg 2160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2101 cagggacagccctatacccaagaacggtatcaagagcgatttaatagtgtaggcccatgg 2160
Query: 2161 ggccagcagtactctaattttccgcctaacaatggtgcggttccagggacaaggatcgcc 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2161 ggccagcagtactctaattttccgcctaacaatggtgcggttccagggacaaggatcgcc 2220
Query: 2221 tacactaatctcgaaaaatttcttagtgactacggcccccagctagatcgtataggcggc 2280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2221 tacactaatctcgaaaaatttcttagtgactacggcccccagctagatcgtataggcggc 2280
Query: 2281 gatcagggcaagtacctggcgatcatggaacatgggcgcccggcatcatgggaacaacgt 2340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2281 gatcagggcaagtacctggcgatcatggaacatgggcgcccggcatcatgggaacaacgt 2340
Query: 2341 gccctgcacgtgacgtcgttacgcgacccctaccacgcgtataccattgattggttgcct 2400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2341 gccctgcacgtgacgtcgttacgcgacccctaccacgcgtataccattgattggttgcct 2400
Query: 2401 gagggatggttcatcgaagtatctgaggtcgcgccggggtgcggccagccgggcggatcc 2460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2401 gagggatggttcatcgaagtatctgaggtcgcgccggggtgcggccagccgggcggatcc 2460
Query: 2461 atccaagtgcggatattcgatcatcagaacgagatgcgcaaagtggaagagttaataagg 2520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2461 atccaagtgcggatattcgatcatcagaacgagatgcgcaaagtggaagagttaataagg 2520
Query: 2521 cgcggggtgttgcgacagtga 2541
|||||||||||||||||||||
Sbjct: 2521 cgcggggtgttgcgacagtga 2541
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00380 224747 224532 len=216
(216 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218423.1 [gene=Rv3906c] [protein=hypoth... 428 e-121
>lcl|NC_000962.2_cdsid_NP_218423.1 [gene=Rv3906c]
[protein=hypothetical protein] [protein_id=NP_218423.1]
[location=complement(4391097..4391606)]
Length = 510
Score = 428 bits (216), Expect = e-121
Identities = 216/216 (100%)
Strand = Plus / Plus
Query: 1 atgacgcgctggccgacttcgacggcgacgacgttgccgaccacgccgtattcgacgtcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atgacgcgctggccgacttcgacggcgacgacgttgccgaccacgccgtattcgacgtcg 187
Query: 61 acaacgacggcaccccggaaagctacttcatcgacgacggatcggggacctgggcggtcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 acaacgacggcaccccggaaagctacttcatcgacgacggatcggggacctgggcggtcg 247
Query: 121 ccgtcgaccgcggcggacaactgcgctggtatgggctcgacggcgtcgagcacaccggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ccgtcgaccgcggcggacaactgcgctggtatgggctcgacggcgtcgagcacaccggtg 307
Query: 181 gtccactggttgacttcgacgggttcggtggtttag 216
||||||||||||||||||||||||||||||||||||
Sbjct: 308 gtccactggttgacttcgacgggttcggtggtttag 343
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00387 226341 224899 len=1443
(1443 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_YP_178026.1 [gene=pcnA] [protein=poly(A) p... 2861 0.0
>lcl|NC_000962.2_cdsid_YP_178026.1 [gene=pcnA] [protein=poly(A)
polymerase] [protein_id=YP_178026.1]
[location=complement(4391631..4393073)]
Length = 1443
Score = 2861 bits (1443), Expect = 0.0
Identities = 1443/1443 (100%)
Strand = Plus / Plus
Query: 1 gtgccggaagccgtccaggaagccgatctgctaaccgccgctgcggttgccttgaacagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgccggaagccgtccaggaagccgatctgctaaccgccgctgcggttgccttgaacagg 60
Query: 61 catgctgccttattgcgggaactcgggtcggtgttcgccgccgcgggacacgagttgtat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catgctgccttattgcgggaactcgggtcggtgttcgccgccgcgggacacgagttgtat 120
Query: 121 ctggtcggcggttcggtgcgagatgcactgttgggccggttgagccccgacctggacttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctggtcggcggttcggtgcgagatgcactgttgggccggttgagccccgacctggacttc 180
Query: 181 accaccgacgcccgtcccgagcgggtgcaggagatcgtgcggccgtgggccgatgcggtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 accaccgacgcccgtcccgagcgggtgcaggagatcgtgcggccgtgggccgatgcggtg 240
Query: 241 tgggataccggaatcgaattcggcaccgtcggcgtgggtaagagcgaccaccgcatggag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgggataccggaatcgaattcggcaccgtcggcgtgggtaagagcgaccaccgcatggag 300
Query: 301 atcaccacattccgtgccgacagctacgaccgggtttcgcgtcatccagaggtacgtttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atcaccacattccgtgccgacagctacgaccgggtttcgcgtcatccagaggtacgtttc 360
Query: 361 ggcgattgcctcgagggcgatctggtccgccgcgacttcaccacgaacgcaatggctgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggcgattgcctcgagggcgatctggtccgccgcgacttcaccacgaacgcaatggctgtg 420
Query: 421 cgcgtcaccgccactgggccgggcgaattcctggatccgcttggtggcttggcggcgctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgcgtcaccgccactgggccgggcgaattcctggatccgcttggtggcttggcggcgctg 480
Query: 481 cgggccaaggtgttagacaccccggcggcgccgtcggggtcctttggcgacgatccgttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgggccaaggtgttagacaccccggcggcgccgtcggggtcctttggcgacgatccgttg 540
Query: 541 cggatgctgcgcgccgcgcggttcgtctcgcaacttggattcgcggtggcgccgcgggtg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cggatgctgcgcgccgcgcggttcgtctcgcaacttggattcgcggtggcgccgcgggtg 600
Query: 601 cgcgcggcgatcgaagagatggcgccgcagttggcccgaatcagcgccgaacgggtggcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cgcgcggcgatcgaagagatggcgccgcagttggcccgaatcagcgccgaacgggtggcc 660
Query: 661 gccgagctggacaagctgctggtcggtgaggatccggccgcgggtatcgacctgatggtg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gccgagctggacaagctgctggtcggtgaggatccggccgcgggtatcgacctgatggtg 720
Query: 721 cagagcggtatgggtgctgtggtcttgcctgaaatcggtgggatgcggatggcgatcgac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cagagcggtatgggtgctgtggtcttgcctgaaatcggtgggatgcggatggcgatcgac 780
Query: 781 gaacatcaccagcacaaggacgtctatcagcattccttgaccgtgctgcggcaggcgatc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gaacatcaccagcacaaggacgtctatcagcattccttgaccgtgctgcggcaggcgatc 840
Query: 841 gcgctggaggacgacggcccggatctggtgttgcgctgggcggcgctgctgcacgacatc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gcgctggaggacgacggcccggatctggtgttgcgctgggcggcgctgctgcacgacatc 900
Query: 901 ggcaagcccgccacccgccgtcacgaacccgacggtggggtgagcttccatcaccacgaa 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ggcaagcccgccacccgccgtcacgaacccgacggtggggtgagcttccatcaccacgaa 960
Query: 961 gtggtcggcgccaagatggtgcgcaagcggatgcgggcgctgaagtattccaagcagatg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gtggtcggcgccaagatggtgcgcaagcggatgcgggcgctgaagtattccaagcagatg 1020
Query: 1021 atcgacgacatctcgcagctggtctacctgcatctgcggtttcacggctacggcgatggg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 atcgacgacatctcgcagctggtctacctgcatctgcggtttcacggctacggcgatggg 1080
Query: 1081 aaatggaccgactctgcggtgcgccgctatgtcaccgacgccggggccctactgccacgg 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 aaatggaccgactctgcggtgcgccgctatgtcaccgacgccggggccctactgccacgg 1140
Query: 1141 ctgcacaagctggtgcgcgccgactgcacgacccgcaacaagcgccgggccgcgcggttg 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 ctgcacaagctggtgcgcgccgactgcacgacccgcaacaagcgccgggccgcgcggttg 1200
Query: 1201 caggccagttacgaccggctggaagagcggatcgcggagctggccgcccaggaggatctg 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 caggccagttacgaccggctggaagagcggatcgcggagctggccgcccaggaggatctg 1260
Query: 1261 gatcgggtgcgccccgacctggacggcaaccagatcatggcggtgctcgacattccggcg 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 gatcgggtgcgccccgacctggacggcaaccagatcatggcggtgctcgacattccggcg 1320
Query: 1321 ggcccgcaagtcggcgaggcgtggcgctacttgaaggagctgcggctagagcgcggcccg 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 ggcccgcaagtcggcgaggcgtggcgctacttgaaggagctgcggctagagcgcggcccg 1380
Query: 1381 ttgtccaccgaggaggcgacaaccgagctgctgtcctggtggaaatcacgggggaaccgc 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 ttgtccaccgaggaggcgacaaccgagctgctgtcctggtggaaatcacgggggaaccgc 1440
Query: 1441 tag 1443
|||
Sbjct: 1441 tag 1443
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00391 227460 229868 len=2409
(2409 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218426.1 [gene=Rv3909] [protein=hypothe... 4775 0.0
>lcl|NC_000962.2_cdsid_NP_218426.1 [gene=Rv3909] [protein=hypothetical
protein] [protein_id=NP_218426.1]
[location=4394192..4396600]
Length = 2409
Score = 4775 bits (2409), Expect = 0.0
Identities = 2409/2409 (100%)
Strand = Plus / Plus
Query: 1 gtgaccgcactgcaactcggctgggccgctttggcgcgcgtcacctcagcgatcggcgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgaccgcactgcaactcggctgggccgctttggcgcgcgtcacctcagcgatcggcgtc 60
Query: 61 gtggccggcctcgggatggcgctcacggtaccgtcggcggcaccgcacgcgctcgcaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtggccggcctcgggatggcgctcacggtaccgtcggcggcaccgcacgcgctcgcaggc 120
Query: 121 gagcccagcccgacgccttttgtccaggtccgcatcgatcaggtgaccccggacgtggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagcccagcccgacgccttttgtccaggtccgcatcgatcaggtgaccccggacgtggtg 180
Query: 181 accacttccagcgaaccccatgtcaccgtcagcggaacggtgaccaataccggtgaccgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 accacttccagcgaaccccatgtcaccgtcagcggaacggtgaccaataccggtgaccgc 240
Query: 241 ccagtccgcgatgtgatggtccggcttgagcacgccgccgcggtcacgtcgtcaacggcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccagtccgcgatgtgatggtccggcttgagcacgccgccgcggtcacgtcgtcaacggcg 300
Query: 301 ttacgcacctcgctcgacggcggcaccgaccagtaccagccggccgcggacttcctcacg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttacgcacctcgctcgacggcggcaccgaccagtaccagccggccgcggacttcctcacg 360
Query: 361 gtcgcccccgaactagaccgcgggcaagaggccggctttaccctctcggccccgctgcgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtcgcccccgaactagaccgcgggcaagaggccggctttaccctctcggccccgctgcgc 420
Query: 421 tcgctgaccaggccgtcgttggccgtcaaccagcccgggatctacccggtcctggtcaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcgctgaccaggccgtcgttggccgtcaaccagcccgggatctacccggtcctggtcaac 480
Query: 481 gtcaatgggacacccgactacggtgcgcctgcgcggctcgacaatgcgcggttcctgttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtcaatgggacacccgactacggtgcgcctgcgcggctcgacaatgcgcggttcctgttg 540
Query: 541 cccgtggtcggagtgccacccgaccaggccaccgacttcggctccgctgttgcaccagaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cccgtggtcggagtgccacccgaccaggccaccgacttcggctccgctgttgcaccagaa 600
Query: 601 acgacggcgccggtctggatcaccatgctgtggccgctggccgaccggccccggttggcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 acgacggcgccggtctggatcaccatgctgtggccgctggccgaccggccccggttggcc 660
Query: 661 cccggggcacccggtggcaccgttcccgtccggctggtcgacgacgacctggcaaactcg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cccggggcacccggtggcaccgttcccgtccggctggtcgacgacgacctggcaaactcg 720
Query: 721 ctggccaacggcggccggctggacatcctcctgtcggcggccgagttcgccaccaaccgg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ctggccaacggcggccggctggacatcctcctgtcggcggccgagttcgccaccaaccgg 780
Query: 781 gaagtcgaccccgacggcgccgtcggccgagcgctgtgcctggccatcgacccagatcta 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gaagtcgaccccgacggcgccgtcggccgagcgctgtgcctggccatcgacccagatcta 840
Query: 841 ctcatcaccgtcaatgcgatgaccggcggctacgtcgtgtccgactcgcccgacggggcc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ctcatcaccgtcaatgcgatgaccggcggctacgtcgtgtccgactcgcccgacggggcc 900
Query: 901 gctcaactaccgggcaccccgacccacccgggcaccggccaggccgccgcatccagctgg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gctcaactaccgggcaccccgacccacccgggcaccggccaggccgccgcatccagctgg 960
Query: 961 ctggatcgattgcggacgctagtccaccggacatgcgtgacgccgctgccttttgcccaa 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ctggatcgattgcggacgctagtccaccggacatgcgtgacgccgctgccttttgcccaa 1020
Query: 1021 gccgacctggatgctttgcagcgggttaatgatccgaggctgagcgcgatcgcaaccatc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gccgacctggatgctttgcagcgggttaatgatccgaggctgagcgcgatcgcaaccatc 1080
Query: 1081 agccccgccgacatcgtcgaccgcatcctggatgtcagctccacccgcggcgcaaccgtg 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 agccccgccgacatcgtcgaccgcatcctggatgtcagctccacccgcggcgcaaccgtg 1140
Query: 1141 ctgcccgacggcccgttgaccggccgggcgatcaacttgctcagcacccacggcaacacg 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 ctgcccgacggcccgttgaccggccgggcgatcaacttgctcagcacccacggcaacacg 1200
Query: 1201 gttgccgtcgcggccgccgattttagccccgaggaacagcagggttcgtcccagatcggc 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 gttgccgtcgcggccgccgattttagccccgaggaacagcagggttcgtcccagatcggc 1260
Query: 1261 tccgcgctcttacccgctaccgcgccccggcggttgtccccgcgggtggtagcggcgccg 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 tccgcgctcttacccgctaccgcgccccggcggttgtccccgcgggtggtagcggcgccg 1320
Query: 1321 tttgatcccgcggtcggggccgcgctggccgccgcgggaacaaacccgaccgttcctacc 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 tttgatcccgcggtcggggccgcgctggccgccgcgggaacaaacccgaccgttcctacc 1380
Query: 1381 tatctagatccctcgttgttcgttcggatcgcgcatgaatcgatcaccgcgcgccgccag 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 tatctagatccctcgttgttcgttcggatcgcgcatgaatcgatcaccgcgcgccgccag 1440
Query: 1441 gacgccttgggcgcaatgctgtggcgcagcttggagccgaatgccgcgccccgtacccaa 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 gacgccttgggcgcaatgctgtggcgcagcttggagccgaatgccgcgccccgtacccaa 1500
Query: 1501 atcctggtgccgccggcgtcgtggagcctggccagcgacgacgcgcaggtcatcctgacc 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 atcctggtgccgccggcgtcgtggagcctggccagcgacgacgcgcaggtcatcctgacc 1560
Query: 1561 gcgctggccaccgccatccggtctggcctggccgtgccgcgaccactaccggcggtgatc 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 gcgctggccaccgccatccggtctggcctggccgtgccgcgaccactaccggcggtgatc 1620
Query: 1621 gctgacgccgcggcccgcaccgagccaccggaacccccgggcgcttacagcgccgctcgc 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 gctgacgccgcggcccgcaccgagccaccggaacccccgggcgcttacagcgccgctcgc 1680
Query: 1681 ggccggttcaatgacgacatcaccacgcagatcggcgggcaggttgcccggctatggaag 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 ggccggttcaatgacgacatcaccacgcagatcggcgggcaggttgcccggctatggaag 1740
Query: 1741 ctgacctcggcgttgaccatcgatgaccgcaccgggctgaccggcgtgcagtacaccgca 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 ctgacctcggcgttgaccatcgatgaccgcaccgggctgaccggcgtgcagtacaccgca 1800
Query: 1801 ccactacgcgaggacatgttgcgcgcgctgagccaatcgctaccacccgatacccgcaac 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 ccactacgcgaggacatgttgcgcgcgctgagccaatcgctaccacccgatacccgcaac 1860
Query: 1861 gggctggcccagcagcggctggccgtcgttggaaagacgatcgacgatcttttcggcgcg 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 gggctggcccagcagcggctggccgtcgttggaaagacgatcgacgatcttttcggcgcg 1920
Query: 1921 gtgaccatcgtcaacccgggcggctcctacactctggccaccgagcacagtccgctgccg 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 gtgaccatcgtcaacccgggcggctcctacactctggccaccgagcacagtccgctgccg 1980
Query: 1981 ttggcgctgcataatggcctcgccgtgccaatccgggtccggctacaggtcgatgctccg 2040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1981 ttggcgctgcataatggcctcgccgtgccaatccgggtccggctacaggtcgatgctccg 2040
Query: 2041 cccgggatgacggtggccgatgtcggtcagatcgagctaccgcccgggtacctgccgcta 2100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2041 cccgggatgacggtggccgatgtcggtcagatcgagctaccgcccgggtacctgccgcta 2100
Query: 2101 cgagtaccaatcgaggtgaacttcacacagcgggttgccgtcgacgtgtcgctgcggacc 2160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2101 cgagtaccaatcgaggtgaacttcacacagcgggttgccgtcgacgtgtcgctgcggacc 2160
Query: 2161 cccgacggcgtcgcgctgggtgaaccggtgcggttgtcggtgcactccaacgcctacggc 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2161 cccgacggcgtcgcgctgggtgaaccggtgcggttgtcggtgcactccaacgcctacggc 2220
Query: 2221 aaggtgttgttcgcgatcacgctatccgctgcggccgtgctggtaacgctggcgggccgg 2280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2221 aaggtgttgttcgcgatcacgctatccgctgcggccgtgctggtaacgctggcgggccgg 2280
Query: 2281 cgcctttggcaccggttccgtggccagcctgatcgcgccgacctggatcgccccgacctg 2340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2281 cgcctttggcaccggttccgtggccagcctgatcgcgccgacctggatcgccccgacctg 2340
Query: 2341 cctaccggcaaacacgccccgcagcgccgtgccgtagccagtcgggatgacgaaaagcac 2400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2341 cctaccggcaaacacgccccgcagcgccgtgccgtagccagtcgggatgacgaaaagcac 2400
Query: 2401 cgggtatga 2409
|||||||||
Sbjct: 2401 cgggtatga 2409
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00401 229865 233419 len=3555
(3555 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218427.1 [gene=Rv3910] [protein=transme... 7047 0.0
>lcl|NC_000962.2_cdsid_NP_218427.1 [gene=Rv3910]
[protein=transmembrane protein] [protein_id=NP_218427.1]
[location=4396597..4400151]
Length = 3555
Score = 7047 bits (3555), Expect = 0.0
Identities = 3555/3555 (100%)
Strand = Plus / Plus
Query: 1 atgagaccctcccctggagaggtgcccacggcatcgcagaggcagcccgagctgtccgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgagaccctcccctggagaggtgcccacggcatcgcagaggcagcccgagctgtccgac 60
Query: 61 gcggcgctggtatcgcactcctgggcaatggcattcgcgacgctgatcagccggatcacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcggcgctggtatcgcactcctgggcaatggcattcgcgacgctgatcagccggatcacc 120
Query: 121 ggctttgcccggatcgtgctgctggccgcgatcttaggtgcggcgctggccagctcgttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggctttgcccggatcgtgctgctggccgcgatcttaggtgcggcgctggccagctcgttc 180
Query: 181 tcggtggccaaccagctgccgaacctggtcgccgcactcgtgctggaggccaccttcacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcggtggccaaccagctgccgaacctggtcgccgcactcgtgctggaggccaccttcacc 240
Query: 241 gccatcttcgtaccggtgctggcccgcgccgagcaggacgacccggacggcggcgcggcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gccatcttcgtaccggtgctggcccgcgccgagcaggacgacccggacggcggcgcggcg 300
Query: 301 ttcgtgcgccgtttggtcacgttggcaaccaccctgctgctgggcgccaccacgctgtcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttcgtgcgccgtttggtcacgttggcaaccaccctgctgctgggcgccaccacgctgtcg 360
Query: 361 gtgctggccgcgccactgcttgtgcggttgatgctgggcacaaacccacaggttaacgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtgctggccgcgccactgcttgtgcggttgatgctgggcacaaacccacaggttaacgag 420
Query: 421 ccgctgaccacggcgttcgcttacctgctgctaccgcaagtcctcgtctacggcctctcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ccgctgaccacggcgttcgcttacctgctgctaccgcaagtcctcgtctacggcctctcg 480
Query: 481 tcggtattcatggcgatcctgaacacccgcaatgtgttcgggccgccggcctgggcgccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcggtattcatggcgatcctgaacacccgcaatgtgttcgggccgccggcctgggcgccc 540
Query: 541 gtcgtcaacaatgtcgtcgccatcgcgaccctagcggtgtatctggcggtccccggcgag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtcgtcaacaatgtcgtcgccatcgcgaccctagcggtgtatctggcggtccccggcgag 600
Query: 601 ctttcagtcgatccggttcggatgggcaacgccaagctgctggtgctcggcatcggcacc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctttcagtcgatccggttcggatgggcaacgccaagctgctggtgctcggcatcggcacc 660
Query: 661 accgcaggcgtgtttgcacagaccgcggtgctgctggtggccatccggcgcgagcacatc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 accgcaggcgtgtttgcacagaccgcggtgctgctggtggccatccggcgcgagcacatc 720
Query: 721 agcctgcgccccctgtggggaatcgatcagcggctcaagcgctttggcgcgatggccgcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 agcctgcgccccctgtggggaatcgatcagcggctcaagcgctttggcgcgatggccgcc 780
Query: 781 gcgatggtgctctatgtgctgatcagccagctcggcctggtggtcggtaaccggatcgcc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gcgatggtgctctatgtgctgatcagccagctcggcctggtggtcggtaaccggatcgcc 840
Query: 841 agcacggcagcggcttccggccccgcgatctacaactacacctggctagtgctgatgttg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 agcacggcagcggcttccggccccgcgatctacaactacacctggctagtgctgatgttg 900
Query: 901 ccattcggcatgatcggcgtgacggtgctgaccgtggtgatgccgcggctgagccgcaat 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ccattcggcatgatcggcgtgacggtgctgaccgtggtgatgccgcggctgagccgcaat 960
Query: 961 gccgcggccgacgataccccggccgtgctcgccgacctgtcgctagccaccaggctgacc 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gccgcggccgacgataccccggccgtgctcgccgacctgtcgctagccaccaggctgacc 1020
Query: 1021 atgatcacgctgatcccaacggtggcgttcatgacggtcggcggtccggcgatcggtagc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 atgatcacgctgatcccaacggtggcgttcatgacggtcggcggtccggcgatcggtagc 1080
Query: 1081 gcgctttttgcatacggcaacttcggcgacgttgatgccgggtacctgggggcggcgatc 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gcgctttttgcatacggcaacttcggcgacgttgatgccgggtacctgggggcggcgatc 1140
Query: 1141 gcattgtcggcgttcacgttgatcccctatgcgttagtgctgttgcagctacgcgtgttc 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gcattgtcggcgttcacgttgatcccctatgcgttagtgctgttgcagctacgcgtgttc 1200
Query: 1201 tacgcccgcgagcagccgtggacaccaatcacgatcatcgtggtcatcaccggcgtcaag 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 tacgcccgcgagcagccgtggacaccaatcacgatcatcgtggtcatcaccggcgtcaag 1260
Query: 1261 atcctcggctcgctgctggcgccgcatattaccggtgatccccagctggtcgcggcctat 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 atcctcggctcgctgctggcgccgcatattaccggtgatccccagctggtcgcggcctat 1320
Query: 1321 ctcgggctggctaacggactcggatttctcgccggcacgatcgtcggctactacatactg 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 ctcgggctggctaacggactcggatttctcgccggcacgatcgtcggctactacatactg 1380
Query: 1381 cgtcgggccctgcggcccgacggcggccagctgatcggcgtcggcgaggcgcgaaccgtc 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 cgtcgggccctgcggcccgacggcggccagctgatcggcgtcggcgaggcgcgaaccgtc 1440
Query: 1441 ctggtgaccgtcgccgcgtcgttgcttgccggactgctggcacacgtggccgatcggtta 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 ctggtgaccgtcgccgcgtcgttgcttgccggactgctggcacacgtggccgatcggtta 1500
Query: 1501 ctagggctaagcgagctgacggcccacgcgggcagcgtcggttcgctgctgcggctgtcg 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 ctagggctaagcgagctgacggcccacgcgggcagcgtcggttcgctgctgcggctgtcg 1560
Query: 1561 gtgctggctctcatcatgctgccaattctggctgcggtcaccctctgcgcacgggtgccc 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 gtgctggctctcatcatgctgccaattctggctgcggtcaccctctgcgcacgggtgccc 1620
Query: 1621 gaggcgcgggcggcgctggatgccgtgcgagcccgaatcaggagccggcgcttgaagacc 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 gaggcgcgggcggcgctggatgccgtgcgagcccgaatcaggagccggcgcttgaagacc 1680
Query: 1681 gggcctcagacccagaatgtcttggatcaatcgtctcgccccggaccggtcacgtaccct 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 gggcctcagacccagaatgtcttggatcaatcgtctcgccccggaccggtcacgtaccct 1740
Query: 1741 gagcggaggcgtttggccccgccgcgggggaaaagtgtggtccacgagccgatccggcgc 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 gagcggaggcgtttggccccgccgcgggggaaaagtgtggtccacgagccgatccggcgc 1800
Query: 1801 aggcctccggagcaggtagccagagccgggagagcgaaaggaccggaggtgatcgaccgc 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 aggcctccggagcaggtagccagagccgggagagcgaaaggaccggaggtgatcgaccgc 1860
Query: 1861 ccatcggagaacgcctcgtttggtgccgcgtcgggtgccgagctgccgcggcccgtcgcc 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 ccatcggagaacgcctcgtttggtgccgcgtcgggtgccgagctgccgcggcccgtcgcc 1920
Query: 1921 gacgagcttcagctcgacgcgccagccggccgtgaccccggccccgtttcccggccgcac 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 gacgagcttcagctcgacgcgccagccggccgtgaccccggccccgtttcccggccgcac 1980
Query: 1981 ccatccgacctgcaaaacggcgatctgcccgccgatgcggcccgtgggccgattgcgttc 2040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1981 ccatccgacctgcaaaacggcgatctgcccgccgatgcggcccgtgggccgattgcgttc 2040
Query: 2041 gacgcgctccgcgaaccggaccgagaatcgtcggcccccccagatgatgtgcagctggtt 2100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2041 gacgcgctccgcgaaccggaccgagaatcgtcggcccccccagatgatgtgcagctggtt 2100
Query: 2101 cccggcgcccgcatcgctaacggccgctaccgcctgctgatcttccacgggggtgtacca 2160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2101 cccggcgcccgcatcgctaacggccgctaccgcctgctgatcttccacgggggtgtacca 2160
Query: 2161 cccctgcagttctggcaggcgcttgacacagcgctggaccgccaggtggcgctgaccttc 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2161 cccctgcagttctggcaggcgcttgacacagcgctggaccgccaggtggcgctgaccttc 2220
Query: 2221 gtcgacccgcagggcgtcctgcccgacgacgtcctccaggagaccttgtcccgtacgttg 2280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2221 gtcgacccgcagggcgtcctgcccgacgacgtcctccaggagaccttgtcccgtacgttg 2280
Query: 2281 cggctcagccggatcgacaagcccggtgtcgcccgagtgcttgacgtcgtgcacacccgg 2340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2281 cggctcagccggatcgacaagcccggtgtcgcccgagtgcttgacgtcgtgcacacccgg 2340
Query: 2341 gccggtggtctggtagtcgcggagtggatccgcggcggttcgttacaggaagtcgccgac 2400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2341 gccggtggtctggtagtcgcggagtggatccgcggcggttcgttacaggaagtcgccgac 2400
Query: 2401 acctcaccgtcgccggttggcgccatccgggcgatgcagtccctggccgcggccgcagat 2460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2401 acctcaccgtcgccggttggcgccatccgggcgatgcagtccctggccgcggccgcagat 2460
Query: 2461 gctgcccaccgcgccggtgttgcgctgtcgatcgaccatcccagccgggtgcgcgtgagc 2520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2461 gctgcccaccgcgccggtgttgcgctgtcgatcgaccatcccagccgggtgcgcgtgagc 2520
Query: 2521 atcgacggcgacgtcgtgctggcctacccggcgaccatgccggacgccaacccgcaagac 2580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2521 atcgacggcgacgtcgtgctggcctacccggcgaccatgccggacgccaacccgcaagac 2580
Query: 2581 gacatccgcggcatcggcgcctccctgtacgccctgctggtcaaccggtggccgctgccg 2640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2581 gacatccgcggcatcggcgcctccctgtacgccctgctggtcaaccggtggccgctgccg 2640
Query: 2641 gaggccggcgtgcgcagcgggttggcacccgccgagcgcgacaccgctggccagcccatc 2700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2641 gaggccggcgtgcgcagcgggttggcacccgccgagcgcgacaccgctggccagcccatc 2700
Query: 2701 gaacccgccgacatcgaccgtgacatccccttccagatttccgcggtggcggcccggtcg 2760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2701 gaacccgccgacatcgaccgtgacatccccttccagatttccgcggtggcggcccggtcg 2760
Query: 2761 gttcaaggagacggcgggatacgcagcgcgtcaacgctgttgaatctaatgcagcaggcg 2820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2761 gttcaaggagacggcgggatacgcagcgcgtcaacgctgttgaatctaatgcagcaggcg 2820
Query: 2821 accgcggtggccgatcgcaccgaggtgctgggaccgatcgacgaagcaccggtctccgcg 2880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2821 accgcggtggccgatcgcaccgaggtgctgggaccgatcgacgaagcaccggtctccgcg 2880
Query: 2881 gccccgcgcacatccgcgcccaacagcgaaacctacacccgccgccgtcgcaacctgctg 2940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2881 gccccgcgcacatccgcgcccaacagcgaaacctacacccgccgccgtcgcaacctgctg 2940
Query: 2941 atcggcatcggcgcgggtgctgccgtcctcatggtggccctgctggtcttggcttcggtg 3000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2941 atcggcatcggcgcgggtgctgccgtcctcatggtggccctgctggtcttggcttcggtg 3000
Query: 3001 ttgagccggatattcggcgatgtcagcggcggcctcaacaaggacgaactgggcctcaac 3060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3001 ttgagccggatattcggcgatgtcagcggcggcctcaacaaggacgaactgggcctcaac 3060
Query: 3061 gcacccaccgcgtcgacctcggcggccagttcggcgccgcccggcagcgtcgtcaaaccc 3120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3061 gcacccaccgcgtcgacctcggcggccagttcggcgccgcccggcagcgtcgtcaaaccc 3120
Query: 3121 accaaggtcacggtcttctcccccgacggcggcgccgacaaccccggggaggctgatttg 3180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3121 accaaggtcacggtcttctcccccgacggcggcgccgacaaccccggggaggctgatttg 3180
Query: 3181 gccatcgacggcaatccggccacttcctggaagaccgacatctataccgaccccgtcccg 3240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3181 gccatcgacggcaatccggccacttcctggaagaccgacatctataccgaccccgtcccg 3240
Query: 3241 ttccctagcttcaagaacggagtcggtttgatgttgcagctgccccaggccacggtggtc 3300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3241 ttccctagcttcaagaacggagtcggtttgatgttgcagctgccccaggccacggtggtc 3300
Query: 3301 ggcaccgtcgccatcgacgtggccagcaccggcaccaaggtggagatccgctcggcatcc 3360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3301 ggcaccgtcgccatcgacgtggccagcaccggcaccaaggtggagatccgctcggcatcc 3360
Query: 3361 acgccgacgccggcaacgctggaggataccgccgtgttgacttcggccaccgcgctgcgg 3420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3361 acgccgacgccggcaacgctggaggataccgccgtgttgacttcggccaccgcgctgcgg 3420
Query: 3421 cccggccacaacaccatctcggtcgaggcggccgcgcccacctcgaatctgctggtgtgg 3480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3421 cccggccacaacaccatctcggtcgaggcggccgcgcccacctcgaatctgctggtgtgg 3480
Query: 3481 atctctaccttgggaaccaccgacggaaagagtcaagccgacatctcggagatcacgatt 3540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3481 atctctaccttgggaaccaccgacggaaagagtcaagccgacatctcggagatcacgatt 3540
Query: 3541 tacgccgcgtcctga 3555
|||||||||||||||
Sbjct: 3541 tacgccgcgtcctga 3555
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00402 233728 233582 len=147
(147 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218428.1 [gene=sigM] [protein=RNA polym... 291 7e-80
>lcl|NC_000962.2_cdsid_NP_218428.1 [gene=sigM] [protein=RNA
polymerase sigma factor SigM] [protein_id=NP_218428.1]
[location=4400186..4400854]
Length = 669
Score = 291 bits (147), Expect = 7e-80
Identities = 147/147 (100%)
Strand = Plus / Minus
Query: 1 atgcggtgcaaccaactgctgacggcggcatcgtaccggaacgagccggcgccgcggtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 atgcggtgcaaccaactgctgacggcggcatcgtaccggaacgagccggcgccgcggtgc 216
Query: 61 gctgacagcatcgcgtcttgcagcgcatcgtcggcgtcctcggaggtccggctggtgagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 gctgacagcatcgcgtcttgcagcgcatcgtcggcgtcctcggaggtccggctggtgagc 156
Query: 121 cgcgcgagccggtgtagctggcggtga 147
|||||||||||||||||||||||||||
Sbjct: 155 cgcgcgagccggtgtagctggcggtga 129
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00403 233859 234122 len=264
(264 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218428.1 [gene=sigM] [protein=RNA polym... 523 e-149
>lcl|NC_000962.2_cdsid_NP_218428.1 [gene=sigM] [protein=RNA
polymerase sigma factor SigM] [protein_id=NP_218428.1]
[location=4400186..4400854]
Length = 669
Score = 523 bits (264), Expect = e-149
Identities = 264/264 (100%)
Strand = Plus / Plus
Query: 1 atgcggctgcccgtcgagcagcgggccgcggtggtcgccgtggacatgcagggctattcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 atgcggctgcccgtcgagcagcgggccgcggtggtcgccgtggacatgcagggctattcg 465
Query: 61 atcgccgacacccgcccggatgctgggcgtggccgagggcaccgtcaagagccgctgcgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 atcgccgacacccgcccggatgctgggcgtggccgagggcaccgtcaagagccgctgcgc 525
Query: 121 ccgggcgcgggcccgcctagcgcggctgctgggctatctcaacaccggggtgaacatccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ccgggcgcgggcccgcctagcgcggctgctgggctatctcaacaccggggtgaacatccg 585
Query: 181 gcgctgaccccgttgccggtccgtcgtagcatcgatccacgggctcgccgctaccccaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 gcgctgaccccgttgccggtccgtcgtagcatcgatccacgggctcgccgctaccccaca 645
Query: 241 tctggctattgccaccgggcatga 264
||||||||||||||||||||||||
Sbjct: 646 tctggctattgccaccgggcatga 669
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00405 234883 234725 len=159
(159 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218429.1 [gene=Rv3912] [protein=hypothe... 315 5e-87
>lcl|NC_000962.2_cdsid_NP_218429.1 [gene=Rv3912]
[protein=hypothetical protein] [protein_id=NP_218429.1]
[location=4400870..4401634]
Length = 765
Score = 315 bits (159), Expect = 5e-87
Identities = 159/159 (100%)
Strand = Plus / Minus
Query: 1 gtgctagccaacaacccggtatcggcggcgctgcagtgcggcgcgaccgcaaaaacggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 gtgctagccaacaacccggtatcggcggcgctgcagtgcggcgcgaccgcaaaaacggcc 687
Query: 61 agtttgtcgggcgtgtccgcgggtatcaccagcagtacggcgggccgagcgtcgatatcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 agtttgtcgggcgtgtccgcgggtatcaccagcagtacggcgggccgagcgtcgatatcg 627
Query: 121 atcggctgcgcgcccagcaccggcgtggacgccggatag 159
|||||||||||||||||||||||||||||||||||||||
Sbjct: 626 atcggctgcgcgcccagcaccggcgtggacgccggatag 588
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00406 235833 235621 len=213
(213 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218430.1 [gene=trxB2] [protein=thioredo... 422 e-119
>lcl|NC_000962.2_cdsid_NP_218430.1 [gene=trxB2] [protein=thioredoxin
reductase] [protein_id=NP_218430.1]
[location=4401728..4402735]
Length = 1008
Score = 422 bits (213), Expect = e-119
Identities = 213/213 (100%)
Strand = Plus / Minus
Query: 1 gtgaggtgctggtggtacgcccctgcaccaacacgtagccgtccgggtcgacgtcgatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838 gtgaggtgctggtggtacgcccctgcaccaacacgtagccgtccgggtcgacgtcgatgg 779
Query: 61 cctcgcgcaccaagcccgaccgcggctcgtggccgatcgcgacgaaaacaccggttaccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 cctcgcgcaccaagcccgaccgcggctcgtggccgatcgcgacgaaaacaccggttaccg 719
Query: 121 gcagggtggtttcggcaccggtgttggtgtcgcgtacccgcaagccggtcactgtggtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gcagggtggtttcggcaccggtgttggtgtcgcgtacccgcaagccggtcactgtggtgt 659
Query: 181 ccccgtccaccgcgaccacggtgtggttggtga 213
|||||||||||||||||||||||||||||||||
Sbjct: 658 ccccgtccaccgcgaccacggtgtggttggtga 626
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00408 236605 236709 len=105
(105 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_YP_178027.1 [gene=Rv3915] [protein=hydrola... 208 6e-55
>lcl|NC_000962.2_cdsid_YP_178027.1 [gene=Rv3915] [protein=hydrolase]
[protein_id=YP_178027.1] [location=4403192..4404412]
Length = 1221
Score = 208 bits (105), Expect = 6e-55
Identities = 105/105 (100%)
Strand = Plus / Plus
Query: 1 ttgagttgttcgacgcgcagctcgaccaggcggtccgtgccttccaacagcatcgcggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 ttgagttgttcgacgcgcagctcgaccaggcggtccgtgccttccaacagcatcgcggcc 205
Query: 61 tgctggtggacggcatcgtcggtgaggccacctaccgcgcgttga 105
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 tgctggtggacggcatcgtcggtgaggccacctaccgcgcgttga 250
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00410 237946 237701 len=246
(246 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218433.1 [gene=Rv3916c] [protein=hypoth... 488 e-138
>lcl|NC_000962.2_cdsid_NP_218433.1 [gene=Rv3916c]
[protein=hypothetical protein] [protein_id=NP_218433.1]
[location=complement(4404433..4405167)]
Length = 735
Score = 488 bits (246), Expect = e-138
Identities = 246/246 (100%)
Strand = Plus / Plus
Query: 1 gtgcggccggtgttggaggccctcggcgactgctgtgtcgaacactgcatcatcgacgcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gtgcggccggtgttggaggccctcggcgactgctgtgtcgaacactgcatcatcgacgcg 549
Query: 61 aacttcttgatggacgtgggtttcgtcgtggtggcaccgcacccgtactttccgaggcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 aacttcttgatggacgtgggtttcgtcgtggtggcaccgcacccgtactttccgaggcta 609
Query: 121 cgcctcgaactggacaaagggctggggtggaaagccgaagtcgaggccgctcttgaacgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 cgcctcgaactggacaaagggctggggtggaaagccgaagtcgaggccgctcttgaacgc 669
Query: 181 ttgctggagaatgctcgactgcaagagccgatagcagcggggtcgacggccggcaacacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 ttgctggagaatgctcgactgcaagagccgatagcagcggggtcgacggccggcaacacg 729
Query: 241 tcgtaa 246
||||||
Sbjct: 730 tcgtaa 735
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00414 241841 241602 len=240
(240 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218437.1 [gene=Rv3920c] [protein=hypoth... 476 e-135
>lcl|NC_000962.2_cdsid_NP_218437.1 [gene=Rv3920c]
[protein=hypothetical protein] [protein_id=NP_218437.1]
[location=complement(4408334..4408897)]
Length = 564
Score = 476 bits (240), Expect = e-135
Identities = 240/240 (100%)
Strand = Plus / Plus
Query: 1 gtgcggagccggttgatgctagacatcgcgaggtggcgacggcggcgccgggaggaattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtgcggagccggttgatgctagacatcgcgaggtggcgacggcggcgccgggaggaattg 384
Query: 61 gcggcgctggccgacgaggtggcgcggcgagtggccgaaaccggtgaccgcgaggaactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcggcgctggccgacgaggtggcgcggcgagtggccgaaaccggtgaccgcgaggaactc 444
Query: 121 gttccaatgacgccgttcgaacggaagatcgtccacgatgcggttgcagcggtgccaggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gttccaatgacgccgttcgaacggaagatcgtccacgatgcggttgcagcggtgccaggt 504
Query: 181 gtgcacagcgaaagcgaaggcgtggagccagaacgccgagtcgttgtgctccgcgactag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtgcacagcgaaagcgaaggcgtggagccagaacgccgagtcgttgtgctccgcgactag 564
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00415 243108 243296 len=189
(189 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218438.1 [gene=Rv3921c] [protein=inner ... 375 e-105
>lcl|NC_000962.2_cdsid_NP_218438.1 [gene=Rv3921c] [protein=inner
membrane protein translocase component YidC]
[protein_id=NP_218438.1]
[location=complement(4408969..4410069)]
Length = 1101
Score = 375 bits (189), Expect = e-105
Identities = 189/189 (100%)
Strand = Plus / Minus
Query: 1 ttgatctgtggttgcagttcctgcatctgcctggtggtgcgaatctggcgcacgaacggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 ttgatctgtggttgcagttcctgcatctgcctggtggtgcgaatctggcgcacgaacggc 171
Query: 61 ttgtacagcagcgcacgcagcgtgaagaccaggaacatcaccgacaacgcccaggcgaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 ttgtacagcagcgcacgcagcgtgaagaccaggaacatcaccgacaacgcccaggcgaag 111
Query: 121 aagttggatggtcctagcacaaacgcgaacagccggtaccaaacccacatgatccacgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 aagttggatggtcctagcacaaacgcgaacagccggtaccaaacccacatgatccacgac 51
Query: 181 accgggtag 189
|||||||||
Sbjct: 50 accgggtag 42
BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= orf00416 243813 243938 len=126
(126 letters)
Database: Mtb_H37Rv
4003 sequences; 4,026,102 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
lcl|NC_000962.2_cdsid_NP_218440.2 [gene=rnpA] [protein=ribonucle... 250 2e-67
>lcl|NC_000962.2_cdsid_NP_218440.2 [gene=rnpA] [protein=ribonuclease
P] [protein_id=NP_218440.2]
[location=complement(4410412..4410762)]
Length = 351
Score = 250 bits (126), Expect = 2e-67
Identities = 126/126 (100%)
Strand = Plus / Minus
Query: 1 ttgacgatcgacccagccacgtgccgcagccgacgtgccacgcggtggcgttccacggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 ttgacgatcgacccagccacgtgccgcagccgacgtgccacgcggtggcgttccacggcc 159
Query: 61 gaccccaccgacttggcgataatcagtccgacgcgcggcccaccgccactcccacgccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 gaccccaccgacttggcgataatcagtccgacgcgcggcccaccgccactcccacgccac 99
Query: 121 caataa 126
||||||
Sbjct: 98 caataa 93
Database: Mtb_H37Rv
Posted date: Jan 12, 2013 4:04 PM
Number of letters in database: 4,026,102
Number of sequences in database: 4003
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4003
Number of Hits to DB: 2,669,160
Number of extensions: 1103838
Number of successful extensions: 355036
Number of sequences better than 1.0e-05: 170
Number of HSP's gapped: 354845
Number of HSP's successfully gapped: 269
Length of database: 4,026,102
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 11 (22.3 bits)
S2: 23 (46.1 bits)