The quantitative Matrix of H-2Kd
| Amino acid/positions | P1 | P2 | P3 | P4 | P5 | P6 | P7 | P8 | P9 |
| A | 0.40 | -1.33 | -0.13 | -0.40 | -0.67 | 0.67 | 0.29 | -0.59 | -0.46 |
| C | 2.00 | -2.00 | -2.00 | 0.00 | -2.00 | 2.00 | 0.00 | 0.67 | 0.00 |
| D | -1.00 | -2.00 | -1.33 | -0.80 | -1.11 | -1.43 | -1.43 | -0.86 | -2.00 |
| E | -1.20 | -2.00 | 0.00 | -0.91 | -0.29 | 0.67 | 1.14 | 0.33 | -2.00 |
| F | 0.67 | 5.00 | -1.00 | 0.57 | 0.50 | -0.22 | 0.00 | -2.00 | -2.00 |
| G | -0.29 | -1.33 | -0.91 | 0.67 | -0.29 | 0.33 | -0.50 | 0.55 | -2.00 |
| H | -0.67 | -2.00 | 1.33 | -0.67 | -2.00 | -2.00 | 0.67 | 1.00 | -2.00 |
| I | -0.44 | -1.60 | 1.62 | -0.91 | -0.33 | -0.40 | -1.50 | -0.40 | 6.31 |
| K | 0.86 | -1.00 | 0.29 | 0.00 | -0.50 | 0.40 | -0.46 | 0.40 | -1.00 |
| L | -0.35 | -0.91 | -0.44 | -1.20 | 0.40 | -1.53 | -1.33 | 0.15 | 6.42 |
| M | -2.00 | -0.67 | -0.67 | 0.00 | 1.38 | -2.00 | 0.00 | -0.67 | 0.67 |
| N | 0.00 | -2.00 | 1.00 | 0.18 | 0.91 | 0.00 | 0.00 | 1.67 | -2.00 |
| P | -1.00 | 1.14 | 0.00 | 1.11 | 0.67 | 2.00 | 0.00 | -0.50 | -2.00 |
| Q | -0.40 | -2.00 | 0.59 | 0.67 | 0.67 | 0.00 | -0.80 | 0.22 | -2.00 |
| R | -1.08 | -0.86 | -1.33 | 0.18 | -0.50 | 0.44 | -0.29 | -1.20 | -2.00 |
| S | 1.33 | -1.43 | -0.18 | 0.29 | 0.46 | -0.67 | 0.50 | -0.33 | -2.00 |
| T | 0.13 | -0.67 | -1.60 | 0.15 | 0.18 | -0.80 | 1.10 | 0.22 | -0.80 |
| V | -0.91 | -2.00 | 0.00 | 0.00 | -0.22 | 0.00 | -0.91 | -0.86 | 6.29 |
| W | -2.00 | -2.00 | 0.00 | -2.00 | 0.00 | -2.00 | -2.00 | -2.00 | -2.00 |
| X | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 2.00 | 0.00 |
| Y | 1.50 | 6.83 | 0.67 | -1.00 | 0.00 | -0.67 | -2.00 | 0.86 | -2.00 |
| Thresold(%) | 1% | 2% | 3% | 4% | 5% | 6% | 7% | 8% | 9% | 10% |
| Value | 10.36 | 8.33 | 7.33 | 6.70 | 6.22 | 5.83 | 5.48 | 5.18 | 4.90 | 4.64 |