The quantitative Matrix of HLA-B*5301
| Amino acid/positions | P1 | P2 | P3 | P4 | P5 | P6 | P7 | P8 | P9 |
| A | -2.00 | -1.64 | -0.77 | 0.22 | 1.00 | 0.55 | 0.00 | 0.55 | 0.12 |
| C | 0.00 | -2.00 | 2.00 | 1.20 | -2.00 | 1.20 | 0.00 | 0.00 | 2.00 |
| D | -1.00 | -2.00 | -0.67 | 2.00 | -0.29 | -2.00 | -2.00 | -0.67 | -2.00 |
| E | -1.33 | -2.00 | -0.67 | -0.46 | -1.00 | -2.00 | -1.20 | 0.67 | -2.00 |
| F | 1.65 | -2.00 | 0.18 | 2.00 | 0.40 | 0.67 | 0.80 | 0.00 | 6.20 |
| G | -1.20 | -2.00 | -1.00 | -1.00 | 0.29 | -0.40 | -2.00 | -2.00 | -2.00 |
| H | 0.00 | -2.00 | 0.00 | 0.00 | 2.00 | 0.00 | 1.20 | 0.00 | 0.00 |
| I | 0.86 | -2.00 | 0.46 | 0.00 | -1.20 | -0.40 | 0.67 | 1.00 | 1.20 |
| K | -2.00 | 0.00 | 0.67 | -1.00 | -0.67 | -1.20 | -1.20 | -0.40 | -2.00 |
| L | 1.08 | -2.00 | 0.00 | -0.18 | 0.15 | -0.22 | 0.86 | -0.93 | 5.93 |
| M | 0.67 | -2.00 | -2.00 | 0.00 | 2.00 | -2.00 | -0.40 | 0.00 | -1.00 |
| N | -2.00 | 0.00 | 0.00 | -2.00 | -0.50 | -0.67 | 0.00 | -0.40 | -0.67 |
| P | -2.00 | 6.93 | 0.40 | 0.80 | 1.00 | 0.00 | 0.67 | 1.08 | -2.00 |
| Q | 0.00 | -2.00 | -0.67 | -1.00 | 0.00 | 1.60 | 0.40 | -0.67 | -2.00 |
| R | 2.00 | -2.00 | 0.00 | 1.00 | -0.40 | -2.00 | -2.00 | 0.67 | -2.00 |
| S | 0.67 | -2.00 | 0.00 | 0.18 | 0.00 | 0.22 | -0.50 | 0.86 | -2.00 |
| T | -1.00 | -2.00 | -0.40 | 0.40 | -0.29 | -1.00 | -2.00 | 0.40 | -1.43 |
| V | -1.20 | -2.00 | 0.77 | 0.00 | -0.22 | 0.67 | 1.33 | -0.40 | 0.86 |
| W | 0.00 | -2.00 | 2.00 | -2.00 | -2.00 | 2.00 | 2.00 | -0.40 | 7.00 |
| X | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
| Y | -0.40 | -2.00 | 2.00 | -2.00 | -2.00 | 0.00 | -0.50 | -0.67 | 0.67 |
| Thresold(%) | 1% | 2% | 3% | 4% | 5% | 6% | 7% | 8% | 9% | 10% |
| Value | 9.22 | 7.60 | 6.67 | 6.00 | 5.44 | 4.96 | 4.53 | 4.14 | 3.77 | 3.43 |