OCA Atlas for 1KG0
1KG0 Virus Viral Protein,Immune System date Nov 25, 2001
title Structure Of The Epstein-Barr Virus Gp42 Protein Bound To The Mhc Class II Receptor Hla-Dr1
authors M.M.Mullen, K.M.Haan, R.Longnecker, T.S.Jardetzky
compound source
Molecule: Mhc Class II Receptor Hla-Dr1
Chain: A
Fragment: Alpha Chain, Extracellular Domain
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Expression_system: Escherichia Coli
Expression_system_common: Bacteria

Molecule: Mhc Class II Receptor Hla-Dr1
Chain: B
Fragment: Beta Chain, Extracellular Domain
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Expression_system: Escherichia Coli
Expression_system_common: Bacteria

Molecule: Hemagglutinin Ha Peptide
Chain: D
Fragment: Antigenic Peptide
Engineered: Yes
Synthetic: Yes
Other_details: Synthetic Peptide Derived From Influenza Hemagglutinin Sequence;

Molecule: Gp42 Protein
Chain: C
Fragment: Extracellular Domain
Engineered: Yes
Organism_scientific: Epstein-Barr Virus
Expression_system: Trichoplusia Ni
Expression_system_common: Cabbage Looper
Expression_system_vector_type: Baculovirus
Expression_system_plasmid: Pbac-Gus3
symmetry Space Group: P 63 2 2
R_factor 0.221
crystal
cell
length a length b length c angle alpha angle beta angle gamma
170.400 170.400 101.000 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.65 Å
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (118 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1KG0
  • Likely Quarternary Molecular Structure file(s) for 1KG0
  • Retrieve 1KG0 in mmCIF format [Save to disk]
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    • Visual 3D analysis of 1KG0
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    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Fold representative 1kg0 from FSSP and Dali (Families of Structurally Similar Proteins)
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1kg0_A] [1kg0_B] [1kg0_C] [1kg0_D]
    • Other resources with information on 1KG0

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