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The result page of search shows exclusive peptide/epitopes generated due to mutation [Neoepitope], the tissue of origin [Tissue], position of peptide in protein [Position], number of mismatches counted by aligning mutated and normal protein sequence [Num Mismatch, percentage of cell lines with this peptide over total number of cell lines [Promiscuity %]. The immune information include CTL epitopes (Yes/No), MHC I binders, MHC II binders (both given as number of alleles) and B cell epitopes (Yes/No). For more information, please click |
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Protein | Neoepitopes | Tissue | Position | Prot Mutation | cDNA Mutation | Mutation Type | Num Mismatch | Promiscuity (%) | Cell Line | CTL | MHC I | NHLApred | MHC II | Bcell | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NR1H2 | CNKRSSDQP | LARGE_INTESTINE | 238 | p.F243del | c.726_728delCTT | In_Frame_Del | 4 | 0.11 | LOVO | N | 0 | 0 | 0 | Y | ||||||||||||
NR1H2 | KRSSDQPKV | LARGE_INTESTINE | 240 | p.F243del | c.726_728delCTT | In_Frame_Del | 3 | 0.11 | LOVO | N | 5 | 0 | 0 | N | ||||||||||||
NR1H2 | LQCNKRSSD | LARGE_INTESTINE | 236 | p.F243del | c.726_728delCTT | In_Frame_Del | 2 | 0.11 | LOVO | N | 0 | 0 | 0 | N | ||||||||||||
NR1H2 | NKRSSDQPK | LARGE_INTESTINE | 239 | p.F243del | c.726_728delCTT | In_Frame_Del | 4 | 0.11 | LOVO | N | 1 | 0 | 0 | Y | ||||||||||||
NR1H2 | QCNKRSSDQ | LARGE_INTESTINE | 237 | p.F243del | c.726_728delCTT | In_Frame_Del | 3 | 0.11 | LOVO | N | 0 | 0 | 0 | N | ||||||||||||
NR1H2 | QLQCNKRSS | LARGE_INTESTINE | 235 | p.F243del | c.726_728delCTT | In_Frame_Del | 1 | 0.11 | LOVO | N | 0 | 0 | 0 | N | ||||||||||||
NR1H2 | RSSDQPKVT | LARGE_INTESTINE | 241 | p.F243del | c.726_728delCTT | In_Frame_Del | 2 | 0.11 | LOVO | N | 2 | 0 | 0 | N | ||||||||||||
NR1H2 | SSDQPKVTP | LARGE_INTESTINE | 242 | p.F243del | c.726_728delCTT | In_Frame_Del | 1 | 0.11 | LOVO | N | 0 | 0 | 0 | N | ||||||||||||