Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

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The result page of search shows exclusive peptide/epitopes generated due to mutation [Neoepitope], the tissue of origin [Tissue], position of peptide in protein [Position], number of mismatches counted by aligning mutated and normal protein sequence [Num Mismatch, percentage of cell lines with this peptide over total number of cell lines [Promiscuity %]. The immune information include CTL epitopes (Yes/No), MHC I binders, MHC II binders (both given as number of alleles) and B cell epitopes (Yes/No). For more information, please click HERE


Result Reset Search:
ProteinNeoepitopesTissuePositionProt MutationcDNA MutationMutation TypeNum MismatchPromiscuity (%)Cell LineCTLMHC INHLApredMHC IIBcell
EGFRAIKEATSPKLUNG743p.ELR746delc.2236_2244delGAATTAAGAIn_Frame_Del30.11HCC4006N200N
EGFRIKEATSPKALUNG744p.ELR746delc.2236_2244delGAATTAAGAIn_Frame_Del20.11HCC4006N200N
EGFRIPVAIKEATLUNG740p.ELR746delc.2236_2244delGAATTAAGAIn_Frame_Del20.11HCC4006N600N
EGFRKEATSPKANLUNG745p.ELR746delc.2236_2244delGAATTAAGAIn_Frame_Del10.11HCC4006N400N
EGFRKIPVAIKEALUNG739p.ELR746delc.2236_2244delGAATTAAGAIn_Frame_Del10.11HCC4006N400N
EGFRPVAIKEATSLUNG741p.ELR746delc.2236_2244delGAATTAAGAIn_Frame_Del30.11HCC4006N000N
EGFRVAIKEATSPLUNG742p.ELR746delc.2236_2244delGAATTAAGAIn_Frame_Del40.11HCC4006N001N
EGFRAIKTSPKANLUNG743p.ELREA746delc.2236_2250delGAATTAAGAGAAGCAIn_Frame_Del30.44HCC2279N000N
EGFRAIKTSPKANLUNG743p.ELREA746delc.2236_2250delGAATTAAGAGAAGCAIn_Frame_Del30.44HCC827N000N
EGFRAIKTSPKANLUNG743p.ELREA746delc.2235_2249delGGAATTAAGAGAAGCIn_Frame_Del30.44NCIH1650N000N
EGFRAIKTSPKANLUNG743p.ELREA746delc.2235_2249delGGAATTAAGAGAAGCIn_Frame_Del30.44PC14N000N
EGFRIKTSPKANKLUNG744p.ELREA746delc.2236_2250delGAATTAAGAGAAGCAIn_Frame_Del20.44HCC2279N106N
EGFRIKTSPKANKLUNG744p.ELREA746delc.2236_2250delGAATTAAGAGAAGCAIn_Frame_Del20.44HCC827N106N
EGFRIKTSPKANKLUNG744p.ELREA746delc.2235_2249delGGAATTAAGAGAAGCIn_Frame_Del20.44NCIH1650N106N
EGFRIKTSPKANKLUNG744p.ELREA746delc.2235_2249delGGAATTAAGAGAAGCIn_Frame_Del20.44PC14N106N
EGFRIPVAIKTSPLUNG740p.ELREA746delc.2236_2250delGAATTAAGAGAAGCAIn_Frame_Del30.44HCC2279N200N
EGFRIPVAIKTSPLUNG740p.ELREA746delc.2236_2250delGAATTAAGAGAAGCAIn_Frame_Del30.44HCC827N200N
EGFRIPVAIKTSPLUNG740p.ELREA746delc.2235_2249delGGAATTAAGAGAAGCIn_Frame_Del30.44NCIH1650N200N
EGFRIPVAIKTSPLUNG740p.ELREA746delc.2235_2249delGGAATTAAGAGAAGCIn_Frame_Del30.44PC14N200N
EGFRKIPVAIKTSLUNG739p.ELREA746delc.2236_2250delGAATTAAGAGAAGCAIn_Frame_Del20.44HCC2279N100N
EGFRKIPVAIKTSLUNG739p.ELREA746delc.2236_2250delGAATTAAGAGAAGCAIn_Frame_Del20.44HCC827N100N
EGFRKIPVAIKTSLUNG739p.ELREA746delc.2235_2249delGGAATTAAGAGAAGCIn_Frame_Del20.44NCIH1650N100N
EGFRKIPVAIKTSLUNG739p.ELREA746delc.2235_2249delGGAATTAAGAGAAGCIn_Frame_Del20.44PC14N100N
EGFRKTSPKANKELUNG745p.ELREA746delc.2236_2250delGAATTAAGAGAAGCAIn_Frame_Del10.44HCC2279N100N
EGFRKTSPKANKELUNG745p.ELREA746delc.2236_2250delGAATTAAGAGAAGCAIn_Frame_Del10.44HCC827N100N
EGFRKTSPKANKELUNG745p.ELREA746delc.2235_2249delGGAATTAAGAGAAGCIn_Frame_Del10.44NCIH1650N100N
EGFRKTSPKANKELUNG745p.ELREA746delc.2235_2249delGGAATTAAGAGAAGCIn_Frame_Del10.44PC14N100N
EGFRPVAIKTSPKLUNG741p.ELREA746delc.2236_2250delGAATTAAGAGAAGCAIn_Frame_Del40.44HCC2279N200N
EGFRPVAIKTSPKLUNG741p.ELREA746delc.2236_2250delGAATTAAGAGAAGCAIn_Frame_Del40.44HCC827N200N
EGFRPVAIKTSPKLUNG741p.ELREA746delc.2235_2249delGGAATTAAGAGAAGCIn_Frame_Del40.44NCIH1650N200N
EGFRPVAIKTSPKLUNG741p.ELREA746delc.2235_2249delGGAATTAAGAGAAGCIn_Frame_Del40.44PC14N200N
EGFRVAIKTSPKALUNG742p.ELREA746delc.2236_2250delGAATTAAGAGAAGCAIn_Frame_Del40.44HCC2279N603N
EGFRVAIKTSPKALUNG742p.ELREA746delc.2236_2250delGAATTAAGAGAAGCAIn_Frame_Del40.44HCC827N603N
EGFRVAIKTSPKALUNG742p.ELREA746delc.2235_2249delGGAATTAAGAGAAGCIn_Frame_Del40.44NCIH1650N603N
EGFRVAIKTSPKALUNG742p.ELREA746delc.2235_2249delGGAATTAAGAGAAGCIn_Frame_Del40.44PC14N603N
EGFRVKIPVAIKTLUNG738p.ELREA746delc.2236_2250delGAATTAAGAGAAGCAIn_Frame_Del10.44HCC2279N103N
EGFRVKIPVAIKTLUNG738p.ELREA746delc.2236_2250delGAATTAAGAGAAGCAIn_Frame_Del10.44HCC827N103N
EGFRVKIPVAIKTLUNG738p.ELREA746delc.2235_2249delGGAATTAAGAGAAGCIn_Frame_Del10.44NCIH1650N103N
EGFRVKIPVAIKTLUNG738p.ELREA746delc.2235_2249delGGAATTAAGAGAAGCIn_Frame_Del10.44PC14N103N