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The result page of search shows exclusive peptide/epitopes generated due to mutation [Neoepitope], the tissue of origin [Tissue], position of peptide in protein [Position], number of mismatches counted by aligning mutated and normal protein sequence [Num Mismatch, percentage of cell lines with this peptide over total number of cell lines [Promiscuity %]. The immune information include CTL epitopes (Yes/No), MHC I binders, MHC II binders (both given as number of alleles) and B cell epitopes (Yes/No). For more information, please click |
Result | Search: | |||||||||||||||||||||||||
Protein | Neoepitopes | Tissue | Position | Prot Mutation | cDNA Mutation | Mutation Type | Num Mismatch | Promiscuity (%) | Cell Line | CTL | MHC I | NHLApred | MHC II | Bcell | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
RET | AGLPPREPQ | LUNG | 813 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 5 | 0.11 | NCIH2347 | N | 0 | 0 | 0 | Y | ||||||||||||
RET | APPHRGVRQ | LUNG | 800 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 6 | 0.11 | NCIH2347 | N | 0 | 0 | 0 | Y | ||||||||||||
RET | APPPSSPPF | LARGE_INTESTINE | 1046 | p.A1046fs | c.3136_3137insC | Frame_Shift_Ins | 5 | 0.11 | LS411N | N | 13 | 0 | 0 | N | ||||||||||||
RET | AWLPGQWRQ | LUNG | 824 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 5 | 0.11 | NCIH2347 | N | 0 | 0 | 0 | N | ||||||||||||
RET | DGPAPPHRG | LUNG | 797 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 6 | 0.11 | NCIH2347 | N | 1 | 0 | 0 | Y | ||||||||||||
RET | EPQSGAWLP | LUNG | 819 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 5 | 0.11 | NCIH2347 | N | 1 | 0 | 0 | N | ||||||||||||
RET | GAWLPGQWR | LUNG | 823 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 5 | 0.11 | NCIH2347 | N | 7 | 0 | 0 | N | ||||||||||||
RET | GLPPREPQS | LUNG | 814 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 5 | 0.11 | NCIH2347 | N | 1 | 0 | 0 | Y | ||||||||||||
RET | GPAPPHRGV | LUNG | 798 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 6 | 0.11 | NCIH2347 | Y | 13 | 12 | 0 | Y | ||||||||||||
RET | GQWRQPQLQ | LUNG | 828 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 5 | 0.11 | NCIH2347 | N | 0 | 0 | 0 | N | ||||||||||||
RET | GVRQIRLPA | LUNG | 805 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 6 | 0.11 | NCIH2347 | N | 2 | 0 | 0 | N | ||||||||||||
RET | HRGVRQIRL | LUNG | 803 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 6 | 0.11 | NCIH2347 | Y | 7 | 10 | 0 | N | ||||||||||||
RET | IRLPAGLPP | LUNG | 809 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 5 | 0.11 | NCIH2347 | N | 1 | 0 | 2 | N | ||||||||||||
RET | LPAGLPPRE | LUNG | 811 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 5 | 0.11 | NCIH2347 | N | 1 | 0 | 0 | N | ||||||||||||
RET | LPGQWRQPQ | LUNG | 826 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 5 | 0.11 | NCIH2347 | N | 2 | 0 | 0 | N | ||||||||||||
RET | LPPREPQSG | LUNG | 815 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 5 | 0.11 | NCIH2347 | N | 1 | 0 | 0 | Y | ||||||||||||
RET | NAPPPSSPP | LARGE_INTESTINE | 1045 | p.A1046fs | c.3136_3137insC | Frame_Shift_Ins | 4 | 0.11 | LS411N | N | 0 | 0 | 0 | N | ||||||||||||
RET | NNAPPPSSP | LARGE_INTESTINE | 1044 | p.A1046fs | c.3136_3137insC | Frame_Shift_Ins | 4 | 0.11 | LS411N | N | 0 | 0 | 0 | N | ||||||||||||
RET | PAGLPPREP | LUNG | 812 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 5 | 0.11 | NCIH2347 | N | 0 | 0 | 0 | N | ||||||||||||
RET | PAPPHRGVR | LUNG | 799 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 6 | 0.11 | NCIH2347 | N | 0 | 0 | 0 | Y | ||||||||||||
RET | PGQWRQPQL | LUNG | 827 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 5 | 0.11 | NCIH2347 | N | 1 | 0 | 0 | N | ||||||||||||
RET | PHRGVRQIR | LUNG | 802 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 6 | 0.11 | NCIH2347 | N | 0 | 0 | 0 | N | ||||||||||||
RET | PPHRGVRQI | LUNG | 801 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 6 | 0.11 | NCIH2347 | Y | 7 | 13 | 0 | N | ||||||||||||
RET | PPPSSPPFH | LARGE_INTESTINE | 1047 | p.A1046fs | c.3136_3137insC | Frame_Shift_Ins | 5 | 0.11 | LS411N | N | 0 | 0 | 0 | N | ||||||||||||
RET | PPREPQSGA | LUNG | 816 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 5 | 0.11 | NCIH2347 | N | 4 | 0 | 0 | Y | ||||||||||||
RET | PPSSPPFHM | LARGE_INTESTINE | 1048 | p.A1046fs | c.3136_3137insC | Frame_Shift_Ins | 6 | 0.11 | LS411N | N | 5 | 0 | 0 | N | ||||||||||||
RET | PQLQLPGPP | LUNG | 833 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 5 | 0.11 | NCIH2347 | N | 0 | 0 | 0 | N | ||||||||||||
RET | PQSGAWLPG | LUNG | 820 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 5 | 0.11 | NCIH2347 | N | 0 | 0 | 0 | N | ||||||||||||
RET | PREPQSGAW | LUNG | 817 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 6 | 0.11 | NCIH2347 | N | 1 | 0 | 0 | N | ||||||||||||
RET | PSSPPFHMD | LARGE_INTESTINE | 1049 | p.A1046fs | c.3136_3137insC | Frame_Shift_Ins | 5 | 0.11 | LS411N | N | 0 | 0 | 0 | N | ||||||||||||
RET | QDGPAPPHR | LUNG | 796 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 5 | 0.11 | NCIH2347 | N | 0 | 0 | 0 | Y | ||||||||||||
RET | QIRLPAGLP | LUNG | 808 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 5 | 0.11 | NCIH2347 | N | 0 | 0 | 0 | N | ||||||||||||
RET | QLQLPGPPG | LUNG | 834 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 6 | 0.11 | NCIH2347 | N | 0 | 0 | 0 | N | ||||||||||||
RET | QPQLQLPGP | LUNG | 832 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 5 | 0.11 | NCIH2347 | N | 0 | 0 | 0 | N | ||||||||||||
RET | QSGAWLPGQ | LUNG | 821 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 5 | 0.11 | NCIH2347 | N | 0 | 0 | 0 | N | ||||||||||||
RET | QWRQPQLQL | LUNG | 829 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 4 | 0.11 | NCIH2347 | N | 3 | 0 | 0 | N | ||||||||||||
RET | REPQSGAWL | LUNG | 818 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 6 | 0.11 | NCIH2347 | Y | 12 | 10 | 0 | N | ||||||||||||
RET | RGVRQIRLP | LUNG | 804 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 6 | 0.11 | NCIH2347 | N | 0 | 0 | 0 | N | ||||||||||||
RET | RLPAGLPPR | LUNG | 810 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 5 | 0.11 | NCIH2347 | N | 7 | 0 | 0 | N | ||||||||||||
RET | RQIRLPAGL | LUNG | 807 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 6 | 0.11 | NCIH2347 | N | 16 | 0 | 0 | N | ||||||||||||
RET | RQPQLQLPG | LUNG | 831 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 4 | 0.11 | NCIH2347 | N | 0 | 0 | 0 | N | ||||||||||||
RET | SGAWLPGQW | LUNG | 822 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 5 | 0.11 | NCIH2347 | N | 2 | 0 | 0 | N | ||||||||||||
RET | SQDGPAPPH | LUNG | 795 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 4 | 0.11 | NCIH2347 | N | 1 | 0 | 0 | N | ||||||||||||
RET | VRQIRLPAG | LUNG | 806 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 6 | 0.11 | NCIH2347 | N | 1 | 0 | 10 | N | ||||||||||||
RET | WLPGQWRQP | LUNG | 825 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 5 | 0.11 | NCIH2347 | N | 2 | 0 | 0 | N | ||||||||||||
RET | WRQPQLQLP | LUNG | 830 | p.G798fs | c.2393_2394insC | Frame_Shift_Ins | 4 | 0.11 | NCIH2347 | N | 3 | 0 | 0 | N | ||||||||||||