Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

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The result page of search shows exclusive peptide/epitopes generated due to mutation [Neoepitope], the tissue of origin [Tissue], position of peptide in protein [Position], number of mismatches counted by aligning mutated and normal protein sequence [Num Mismatch, percentage of cell lines with this peptide over total number of cell lines [Promiscuity %]. The immune information include CTL epitopes (Yes/No), MHC I binders, MHC II binders (both given as number of alleles) and B cell epitopes (Yes/No). For more information, please click HERE


Result Reset Search:
ProteinNeoepitopesTissuePositionProt MutationcDNA MutationMutation TypeNum MismatchPromiscuity (%)Cell LineCTLMHC INHLApredMHC IIBcell
RB1CGWSIGRLYENDOMETRIUM83p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO684N600N
RB1CGWSIGRLYOVARY83p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO704N600N
RB1EKGTVGNLYENDOMETRIUM94p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO684N300N
RB1EKGTVGNLYOVARY94p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO704N300N
RB1FICGWSIGRENDOMETRIUM81p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO684N803N
RB1FICGWSIGROVARY81p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO704N803N
RB1GNLYLYCSSENDOMETRIUM99p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO684N100N
RB1GNLYLYCSSOVARY99p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO704N100N
RB1GRLYSKEKGENDOMETRIUM88p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO684N100N
RB1GRLYSKEKGOVARY88p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO704N100N
RB1GTVGNLYLYENDOMETRIUM96p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO684Y8130N
RB1GTVGNLYLYOVARY96p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO704Y8130N
RB1GWSIGRLYSENDOMETRIUM84p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO684N000N
RB1GWSIGRLYSOVARY84p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO704N000N
RB1ICGWSIGRLENDOMETRIUM82p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO684N600N
RB1ICGWSIGRLOVARY82p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO704N600N
RB1KEKGTVGNLENDOMETRIUM93p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO684Y9130N
RB1KEKGTVGNLOVARY93p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO704Y9130N
RB1KGTVGNLYLENDOMETRIUM95p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO684N1000N
RB1KGTVGNLYLOVARY95p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO704N1000N
RB1SFICGWSIGENDOMETRIUM80p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO684N000N
RB1SFICGWSIGOVARY80p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO704N000N
RB1SIGRLYSKEENDOMETRIUM86p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO684N000N
RB1SIGRLYSKEOVARY86p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO704N000N
RB1SKEKGTVGNENDOMETRIUM92p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO684N100N
RB1SKEKGTVGNOVARY92p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO704N100N
RB1TVGNLYLYCENDOMETRIUM97p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO684N300N
RB1TVGNLYLYCOVARY97p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO704N300N
RB1VGNLYLYCSENDOMETRIUM98p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO684N008N
RB1VGNLYLYCSOVARY98p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO704N008N
RB1WSIGRLYSKENDOMETRIUM85p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO684Y5122N
RB1WSIGRLYSKOVARY85p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO704Y5122N
RB1YSKEKGTVGENDOMETRIUM91p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO684N200Y
RB1YSKEKGTVGOVARY91p.R71fsc.211_212delAGFrame_Shift_Del60.22COLO704N200Y