Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

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The result page of search shows exclusive peptide/epitopes generated due to mutation [Neoepitope], the tissue of origin [Tissue], position of peptide in protein [Position], number of mismatches counted by aligning mutated and normal protein sequence [Num Mismatch, percentage of cell lines with this peptide over total number of cell lines [Promiscuity %]. The immune information include CTL epitopes (Yes/No), MHC I binders, MHC II binders (both given as number of alleles) and B cell epitopes (Yes/No). For more information, please click HERE


Result Reset Search:
ProteinNeoepitopesTissuePositionProt MutationcDNA MutationMutation TypeNum MismatchPromiscuity (%)Cell LineCTLMHC INHLApredMHC IIBcell
MYST4ASRSIMSPALARGE_INTESTINE849p.L825fsc.2474_2474delTFrame_Shift_Del50.11SNUC2AN200N
MYST4AVIWLDTSLLARGE_INTESTINE836p.L825fsc.2474_2474delTFrame_Shift_Del50.11SNUC2AN1100N
MYST4DTSLRKSFALARGE_INTESTINE841p.L825fsc.2474_2474delTFrame_Shift_Del50.11SNUC2AN000N
MYST4FASRSIMSPLARGE_INTESTINE848p.L825fsc.2474_2474delTFrame_Shift_Del50.11SNUC2AN204N
MYST4FMSLQKMMKLARGE_INTESTINE826p.L825fsc.2474_2474delTFrame_Shift_Del50.11SNUC2AN7026N
MYST4GPPHQGRGAPROSTATE644p.T640fsc.1919_1919delCFrame_Shift_Del50.11NCIH660N800Y
MYST4IWLDTSLRKLARGE_INTESTINE838p.L825fsc.2474_2474delTFrame_Shift_Del60.11SNUC2AN0010N
MYST4KMMKRAVIWLARGE_INTESTINE831p.L825fsc.2474_2474delTFrame_Shift_Del50.11SNUC2AN400N
MYST4KRAVIWLDTLARGE_INTESTINE834p.L825fsc.2474_2474delTFrame_Shift_Del50.11SNUC2AN200N
MYST4KSFASRSIMLARGE_INTESTINE846p.L825fsc.2474_2474delTFrame_Shift_Del60.11SNUC2AY1090N
MYST4LDTSLRKSFLARGE_INTESTINE840p.L825fsc.2474_2474delTFrame_Shift_Del50.11SNUC2AN600N
MYST4LFMSLQKMMLARGE_INTESTINE825p.L825fsc.2474_2474delTFrame_Shift_Del50.11SNUC2AN402N
MYST4LRKSFASRSLARGE_INTESTINE844p.L825fsc.2474_2474delTFrame_Shift_Del50.11SNUC2AN2016N
MYST4LRWGPPHQGPROSTATE641p.T640fsc.1919_1919delCFrame_Shift_Del50.11NCIH660N204N
MYST4MKRAVIWLDLARGE_INTESTINE833p.L825fsc.2474_2474delTFrame_Shift_Del50.11SNUC2AN001N
MYST4MMKRAVIWLLARGE_INTESTINE832p.L825fsc.2474_2474delTFrame_Shift_Del50.11SNUC2AY1399N
MYST4MSLQKMMKRLARGE_INTESTINE827p.L825fsc.2474_2474delTFrame_Shift_Del50.11SNUC2AY490N
MYST4QKMMKRAVILARGE_INTESTINE830p.L825fsc.2474_2474delTFrame_Shift_Del50.11SNUC2AN200N
MYST4RAVIWLDTSLARGE_INTESTINE835p.L825fsc.2474_2474delTFrame_Shift_Del50.11SNUC2AN200Y
MYST4RKSFASRSILARGE_INTESTINE845p.L825fsc.2474_2474delTFrame_Shift_Del50.11SNUC2AN200N
MYST4RWGPPHQGRPROSTATE642p.T640fsc.1919_1919delCFrame_Shift_Del60.11NCIH660N100N
MYST4SFASRSIMSLARGE_INTESTINE847p.L825fsc.2474_2474delTFrame_Shift_Del50.11SNUC2AN000N
MYST4SLQKMMKRALARGE_INTESTINE828p.L825fsc.2474_2474delTFrame_Shift_Del50.11SNUC2AN300N
MYST4SLRKSFASRLARGE_INTESTINE843p.L825fsc.2474_2474delTFrame_Shift_Del50.11SNUC2AY5100N
MYST4TLRWGPPHQPROSTATE640p.T640fsc.1919_1919delCFrame_Shift_Del50.11NCIH660Y0120N
MYST4TSLRKSFASLARGE_INTESTINE842p.L825fsc.2474_2474delTFrame_Shift_Del50.11SNUC2AN000N
MYST4VIWLDTSLRLARGE_INTESTINE837p.L825fsc.2474_2474delTFrame_Shift_Del60.11SNUC2AN708N
MYST4VTLRWGPPHPROSTATE639p.T640fsc.1919_1919delCFrame_Shift_Del50.11NCIH660N002N
MYST4WGPPHQGRGPROSTATE643p.T640fsc.1919_1919delCFrame_Shift_Del50.11NCIH660N300N
MYST4WLDTSLRKSLARGE_INTESTINE839p.L825fsc.2474_2474delTFrame_Shift_Del50.11SNUC2AN300N