Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Browse Results ...


The result page of search shows exclusive peptide/epitopes generated due to mutation [Neoepitope], the tissue of origin [Tissue], position of peptide in protein [Position], number of mismatches counted by aligning mutated and normal protein sequence [Num Mismatch, percentage of cell lines with this peptide over total number of cell lines [Promiscuity %]. The immune information include CTL epitopes (Yes/No), MHC I binders, MHC II binders (both given as number of alleles) and B cell epitopes (Yes/No). For more information, please click HERE


Result Reset Search:
ProteinNeoepitopesTissuePositionProt MutationcDNA MutationMutation TypeNum MismatchPromiscuity (%)Cell LineCTLMHC INHLApredMHC IIBcell
MSH6AVLMFYCAWURINARY_TRACT1055p.L1057fsc.3171_3171delGFrame_Shift_Del60.11639VY190N
MSH6AWLTIVEGVURINARY_TRACT1062p.L1057fsc.3171_3171delGFrame_Shift_Del60.11639VN400N
MSH6CAWLTIVEGURINARY_TRACT1061p.L1057fsc.3171_3171delGFrame_Shift_Del60.11639VN000N
MSH6EGVMVLCVAURINARY_TRACT1068p.L1057fsc.3171_3171delGFrame_Shift_Del50.11639VN200N
MSH6FYCAWLTIVURINARY_TRACT1059p.L1057fsc.3171_3171delGFrame_Shift_Del50.11639VY790N
MSH6GVMVLCVAQURINARY_TRACT1069p.L1057fsc.3171_3171delGFrame_Shift_Del50.11639VN000N
MSH6IAVLMFYCAURINARY_TRACT1054p.L1057fsc.3171_3171delGFrame_Shift_Del50.11639VN900N
MSH6IVEGVMVLCURINARY_TRACT1066p.L1057fsc.3171_3171delGFrame_Shift_Del50.11639VN100N
MSH6LMFYCAWLTURINARY_TRACT1057p.L1057fsc.3171_3171delGFrame_Shift_Del60.11639VN705N
MSH6LTIVEGVMVURINARY_TRACT1064p.L1057fsc.3171_3171delGFrame_Shift_Del50.11639VN604N
MSH6MFYCAWLTIURINARY_TRACT1058p.L1057fsc.3171_3171delGFrame_Shift_Del50.11639VY12104N
MSH6TIVEGVMVLURINARY_TRACT1065p.L1057fsc.3171_3171delGFrame_Shift_Del50.11639VY16100N
MSH6VLMFYCAWLURINARY_TRACT1056p.L1057fsc.3171_3171delGFrame_Shift_Del60.11639VN13025N
MSH6WLTIVEGVMURINARY_TRACT1063p.L1057fsc.3171_3171delGFrame_Shift_Del50.11639VN600N
MSH6YCAWLTIVEURINARY_TRACT1060p.L1057fsc.3171_3171delGFrame_Shift_Del50.11639VN203N
MSH6KNYKTGSLLTHYROID1042p.K1045fsc.3135_3135delGFrame_Shift_Del50.22FTC133N1500N
MSH6KNYKTGSLLTHYROID1042p.K1045fsc.3135_3135delGFrame_Shift_Del50.22FTC238N1500N
MSH6AVVKKNLLRLUNG1230p.V1232fsc.3696_3697insAAFrame_Shift_Ins50.11HCC2108N600Y
MSH6VVKKNLLRLLUNG1231p.V1232fsc.3696_3697insAAFrame_Shift_Ins50.11HCC2108Y81328Y