Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

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The result page of search shows exclusive peptide/epitopes generated due to mutation [Neoepitope], the tissue of origin [Tissue], position of peptide in protein [Position], number of mismatches counted by aligning mutated and normal protein sequence [Num Mismatch, percentage of cell lines with this peptide over total number of cell lines [Promiscuity %]. The immune information include CTL epitopes (Yes/No), MHC I binders, MHC II binders (both given as number of alleles) and B cell epitopes (Yes/No). For more information, please click HERE


Result Reset Search:
ProteinNeoepitopesTissuePositionProt MutationcDNA MutationMutation TypeNum MismatchPromiscuity (%)Cell LineCTLMHC INHLApredMHC IIBcell
AAK1AQFQMYRTLLARGE_INTESTINE319p.S311fsc.933_933delAFrame_Shift_Del50.11SW403Y1590N
AAK1FQMYRTLPFLARGE_INTESTINE321p.S311fsc.933_933delAFrame_Shift_Del40.11SW403N10043N
AAK1FSLSYSRKSLARGE_INTESTINE310p.S311fsc.933_933delAFrame_Shift_Del60.11SW403N208N
AAK1KSAQFQMYRLARGE_INTESTINE317p.S311fsc.933_933delAFrame_Shift_Del60.11SW403Y590N
AAK1LPFLQSFLNLARGE_INTESTINE327p.S311fsc.933_933delAFrame_Shift_Del50.11SW403N701N
AAK1LSYSRKSAQLARGE_INTESTINE312p.S311fsc.933_933delAFrame_Shift_Del50.11SW403N006N
AAK1MYRTLPFLQLARGE_INTESTINE323p.S311fsc.933_933delAFrame_Shift_Del40.11SW403N008Y
AAK1PFLQSFLNQLARGE_INTESTINE328p.S311fsc.933_933delAFrame_Shift_Del50.11SW403N000N
AAK1QFQMYRTLPLARGE_INTESTINE320p.S311fsc.933_933delAFrame_Shift_Del50.11SW403N000N
AAK1QMYRTLPFLLARGE_INTESTINE322p.S311fsc.933_933delAFrame_Shift_Del40.11SW403Y17100N
AAK1QVSYFSLSYLARGE_INTESTINE306p.S311fsc.933_933delAFrame_Shift_Del30.11SW403N500N
AAK1RKSAQFQMYLARGE_INTESTINE316p.S311fsc.933_933delAFrame_Shift_Del50.11SW403N300N
AAK1RTLPFLQSFLARGE_INTESTINE325p.S311fsc.933_933delAFrame_Shift_Del40.11SW403N1300N
AAK1SAQFQMYRTLARGE_INTESTINE318p.S311fsc.933_933delAFrame_Shift_Del50.11SW403N300N
AAK1SLSYSRKSALARGE_INTESTINE311p.S311fsc.933_933delAFrame_Shift_Del50.11SW403N200N
AAK1SRKSAQFQMLARGE_INTESTINE315p.S311fsc.933_933delAFrame_Shift_Del50.11SW403Y390N
AAK1SYFSLSYSRLARGE_INTESTINE308p.S311fsc.933_933delAFrame_Shift_Del50.11SW403N300N
AAK1SYSRKSAQFLARGE_INTESTINE313p.S311fsc.933_933delAFrame_Shift_Del50.11SW403Y4100N
AAK1TLPFLQSFLLARGE_INTESTINE326p.S311fsc.933_933delAFrame_Shift_Del40.11SW403Y1590N
AAK1VSYFSLSYSLARGE_INTESTINE307p.S311fsc.933_933delAFrame_Shift_Del40.11SW403N001N
AAK1YFSLSYSRKLARGE_INTESTINE309p.S311fsc.933_933delAFrame_Shift_Del50.11SW403Y3132N
AAK1YQVSYFSLSLARGE_INTESTINE305p.S311fsc.933_933delAFrame_Shift_Del20.11SW403N304N
AAK1YRTLPFLQSLARGE_INTESTINE324p.S311fsc.933_933delAFrame_Shift_Del30.11SW403N4028Y
AAK1YSRKSAQFQLARGE_INTESTINE314p.S311fsc.933_933delAFrame_Shift_Del50.11SW403N206N
AAK1APHSNLCSSLARGE_INTESTINE883p.P884fsc.2652_2653insCFrame_Shift_Ins40.11LS180N300Y
AAK1EEFAPHSNLLARGE_INTESTINE880p.P884fsc.2652_2653insCFrame_Shift_Ins40.11LS180N1000N
AAK1EFAPHSNLCLARGE_INTESTINE881p.P884fsc.2652_2653insCFrame_Shift_Ins50.11LS180N100N
AAK1FAPHSNLCSLARGE_INTESTINE882p.P884fsc.2652_2653insCFrame_Shift_Ins40.11LS180N4011N
AAK1LEEFAPHSNLARGE_INTESTINE879p.P884fsc.2652_2653insCFrame_Shift_Ins30.11LS180N300N
AAK1LLEEFAPHSLARGE_INTESTINE878p.P884fsc.2652_2653insCFrame_Shift_Ins20.11LS180N200N
AAK1PHSNLCSSPLARGE_INTESTINE884p.P884fsc.2652_2653insCFrame_Shift_Ins50.11LS180N000N