Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005219 19 869 NP_001276866 18 1135 NP_004439 18 1135 NP_001276865 18 1135 NP_001005862 18 1135 XP_005257197 18 1135 XP_006721828 18 1135 NP_001036064 18 1482 NP_005226 18 1482 XP_005246434 18 1482 XP_005246433 18 1482 XP_005246432 18 1482 XP_006712427 18 1482 NP_112235 17 4312 NP_001269346 17 4312 NP_001035915 17 4312 NP_689564 17 4312 NP_001257577 17 4312 XP_005259057 17 4312 XP_005259056 17 4312 XP_006723307 17 4312 XP_005259055 17 4312 XP_006721514 17 4312 XP_006721513 17 4312 XP_005256514 17 4312 NP_059128 17 4312 NP_002449 16 5631 NP_065849 16 7355 NP_689644 16 7355 NP_055928 15 9605 NP_004658 15 9605 NP_004161 15 9605 NP_659404 15 9605 NP_001269536 15 9605 NP_077808 15 9605 NP_001128653 15 9605 NP_001011547 15 9605 NP_006573 15 9605 XP_006724792 15 9605 XP_005257794 15 9605 XP_005256619 15 9605 XP_006721549 15 9605 XP_006721548 15 9605 XP_005256618 15 9605 XP_005256617 15 9605 XP_006720790 15 9605 XP_005268334 15 9605 XP_005268333 15 9605 XP_006720789 15 9605 XP_006718527 15 9605 NP_115752 15 9605>NP_005219 Length = 1210 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VQLIMQLMP 9 VQLI QLMP Sbjct: 786 VQLITQLMP 794>NP_001276866 Length = 1055 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VQLIMQLMP 9 VQL+ QLMP Sbjct: 794 VQLVTQLMP 802>NP_004439 Length = 1255 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VQLIMQLMP 9 VQL+ QLMP Sbjct: 794 VQLVTQLMP 802>NP_001276865 Length = 1240 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VQLIMQLMP 9 VQL+ QLMP Sbjct: 779 VQLVTQLMP 787>NP_001005862 Length = 1225 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VQLIMQLMP 9 VQL+ QLMP Sbjct: 764 VQLVTQLMP 772>XP_005257197 Length = 1225 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VQLIMQLMP 9 VQL+ QLMP Sbjct: 764 VQLVTQLMP 772>XP_006721828 Length = 1336 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VQLIMQLMP 9 VQL+ QLMP Sbjct: 875 VQLVTQLMP 883>NP_001036064 Length = 1292 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQLIMQLMP 9 +QL+ QLMP Sbjct: 792 IQLVTQLMP 800>NP_005226 Length = 1308 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQLIMQLMP 9 +QL+ QLMP Sbjct: 792 IQLVTQLMP 800>XP_005246434 Length = 1282 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQLIMQLMP 9 +QL+ QLMP Sbjct: 782 IQLVTQLMP 790>XP_005246433 Length = 1298 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQLIMQLMP 9 +QL+ QLMP Sbjct: 782 IQLVTQLMP 790>XP_005246432 Length = 1307 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQLIMQLMP 9 +QL+ QLMP Sbjct: 807 IQLVTQLMP 815>XP_006712427 Length = 1323 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQLIMQLMP 9 +QL+ QLMP Sbjct: 807 IQLVTQLMP 815>NP_112235 Length = 747 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QLIMQLMP 9 +LIMQL+P Sbjct: 447 KLIMQLIP 454>NP_001269346 Length = 566 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QLIMQLMP 9 +L+M+LMP Sbjct: 288 KLVMELMP 295>NP_001035915 Length = 596 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QLIMQLMP 9 +L+M+LMP Sbjct: 355 KLVMELMP 362>NP_689564 Length = 612 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QLIMQLMP 9 +L+M+LMP Sbjct: 371 KLVMELMP 378>NP_001257577 Length = 569 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QLIMQLMP 9 +L+M+LMP Sbjct: 328 KLVMELMP 335>XP_005259057 Length = 416 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QLIMQLMP 9 +LIMQL+P Sbjct: 139 KLIMQLIP 146>XP_005259056 Length = 416 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QLIMQLMP 9 +LIMQL+P Sbjct: 139 KLIMQLIP 146>XP_006723307 Length = 431 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QLIMQLMP 9 +LIMQL+P Sbjct: 154 KLIMQLIP 161>XP_005259055 Length = 431 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QLIMQLMP 9 +LIMQL+P Sbjct: 154 KLIMQLIP 161>XP_006721514 Length = 596 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QLIMQLMP 9 +L+M+LMP Sbjct: 355 KLVMELMP 362>XP_006721513 Length = 598 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QLIMQLMP 9 +L+M+LMP Sbjct: 320 KLVMELMP 327>XP_005256514 Length = 633 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QLIMQLMP 9 +L+M+LMP Sbjct: 355 KLVMELMP 362>NP_059128 Length = 416 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QLIMQLMP 9 +LIMQL+P Sbjct: 139 KLIMQLIP 146>NP_002449 Length = 5762 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VQLIMQLMP 9 +QL++QL+P Sbjct: 534 LQLLVQLVP 542>NP_065849 Length = 1018 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQLIMQLMP 9 VQL +QL+P Sbjct: 104 VQLGLQLLP 112>NP_689644 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VQLIMQLMP 9 VQL+M ++P Sbjct: 544 VQLVMCILP 552>NP_055928 Length = 2961 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QLIMQLMP 9 QLI++L+P Sbjct: 2142 QLIIRLLP 2149>NP_004658 Length = 4834 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VQLIMQLM 8 VQLI QL+ Sbjct: 1009 VQLIQQLL 1016>NP_004161 Length = 524 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VQLIMQLMP 9 VQ+IM MP Sbjct: 251 VQIIMCYMP 259>NP_659404 Length = 547 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VQLIMQLMP 9 +QL++ LMP Sbjct: 329 LQLLVYLMP 337>NP_001269536 Length = 535 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VQLIMQLMP 9 +QL++ LMP Sbjct: 317 LQLLVYLMP 325>NP_077808 Length = 563 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QLIMQLMP 9 Q+I+QL P Sbjct: 32 QVILQLQP 39>NP_001128653 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QLIMQLMP 9 +L+M LMP Sbjct: 397 KLVMALMP 404>NP_001011547 Length = 681 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QLIMQLMP 9 +L+M LMP Sbjct: 372 KLVMALMP 379>NP_006573 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QLIMQLMP 9 Q+I+QL P Sbjct: 32 QVILQLQP 39>XP_006724792 Length = 411 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VQLIMQLMP 9 +QL++ LMP Sbjct: 193 LQLLVYLMP 201>XP_005257794 Length = 257 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VQLIMQL 7 +QLIMQL Sbjct: 12 LQLIMQL 18>XP_005256619 Length = 1581 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QLIMQLMP 9 QLI++L+P Sbjct: 758 QLIIRLLP 765>XP_006721549 Length = 1581 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QLIMQLMP 9 QLI++L+P Sbjct: 758 QLIIRLLP 765>XP_006721548 Length = 1886 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QLIMQLMP 9 QLI++L+P Sbjct: 1063 QLIIRLLP 1070>XP_005256618 Length = 2962 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QLIMQLMP 9 QLI++L+P Sbjct: 2143 QLIIRLLP 2150>XP_005256617 Length = 2966 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QLIMQLMP 9 QLI++L+P Sbjct: 2143 QLIIRLLP 2150>XP_006720790 Length = 4748 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VQLIMQLM 8 VQLI QL+ Sbjct: 923 VQLIQQLL 930>XP_005268334 Length = 4796 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VQLIMQLM 8 VQLI QL+ Sbjct: 971 VQLIQQLL 978>XP_005268333 Length = 4796 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VQLIMQLM 8 VQLI QL+ Sbjct: 971 VQLIQQLL 978>XP_006720789 Length = 4829 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VQLIMQLM 8 VQLI QL+ Sbjct: 1009 VQLIQQLL 1016>XP_006718527 Length = 263 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QLIMQLMP 9 QL++QL P Sbjct: 235 QLLLQLRP 242>NP_115752 Length = 257 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VQLIMQL 7 +QLIMQL Sbjct: 12 LQLIMQL 18Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.341 0.146 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 309,290 Number of extensions: 594 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |