Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 509 XP_005262424 20 509 NP_115583 17 3301 NP_001275763 17 3301 XP_006722984 17 3301 XP_006722983 17 3301 XP_006711677 17 3301 NP_078845 17 3301 NP_003944 17 3301 NP_001139663 17 3301 NP_001106853 16 5631 XP_006712889 16 5631 NP_001180442 16 7355 NP_001180443 16 7355 NP_060434 16 7355 NP_001229695 16 7355 NP_004737 16 7355 NP_001003809 16 7355 NP_001229693 16 7355 NP_001229690 16 7355 NP_001229692 16 7355 NP_001229691 16 7355 NP_853514 16 7355 NP_821158 16 7355 NP_001229694 16 7355 NP_005112 16 7355 NP_001180444 16 7355 NP_001167627 16 7355 XP_005258233 16 7355 XP_005258232 16 7355 XP_005258231 16 7355 XP_006722430 16 7355 XP_005258230 16 7355 XP_005258229 16 7355 XP_005258228 16 7355 XP_005269598 16 7355 XP_006712109 16 7355 NP_001116512 16 7355 NP_940820 15 9605 NP_001028776 15 9605 NP_001028777 15 9605 NP_055266 15 9605 NP_001263309 15 9605 NP_057733 15 9605 NP_076425 15 9605 NP_078978 15 9605 XP_005255569 15 9605 XP_005255568 15 9605 XP_006715751 15 9605 XP_005249757 15 9605 XP_006715750 15 9605 XP_006713833 15 9605 XP_006713832 15 9605 XP_006713831 15 9605>NP_722576 Length = 3080 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SALTAYTPR 9 SAL AYTPR Sbjct: 1384 SALPAYTPR 1392>XP_005262424 Length = 2875 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SALTAYTPR 9 SAL AYTPR Sbjct: 1179 SALPAYTPR 1187>NP_115583 Length = 657 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ALTAYTP 8 ALTAY+P Sbjct: 579 ALTAYSP 585>NP_001275763 Length = 625 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ALTAYTP 8 ALTAY+P Sbjct: 547 ALTAYSP 553>XP_006722984 Length = 303 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ALTAYTP 8 ALTAY+P Sbjct: 225 ALTAYSP 231>XP_006722983 Length = 625 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ALTAYTP 8 ALTAY+P Sbjct: 547 ALTAYSP 553>XP_006711677 Length = 339 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SALTAYTPR 9 SAL YTP+ Sbjct: 106 SALEVYTPK 114>NP_078845 Length = 209 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SALTAYTPR 9 SAL YTP+ Sbjct: 36 SALEVYTPK 44>NP_003944 Length = 269 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SALTAYTPR 9 SAL YTP+ Sbjct: 36 SALEVYTPK 44>NP_001139663 Length = 119 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SALTAYTPR 9 SAL YTP+ Sbjct: 36 SALEVYTPK 44>NP_001106853 Length = 2093 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TAYTPR 9 T+YTPR Sbjct: 413 TSYTPR 418>XP_006712889 Length = 2069 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TAYTPR 9 T+YTPR Sbjct: 430 TSYTPR 435>NP_001180442 Length = 501 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ALTAYT 7 ALTAYT Sbjct: 59 ALTAYT 64>NP_001180443 Length = 438 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ALTAYT 7 ALTAYT Sbjct: 59 ALTAYT 64>NP_060434 Length = 461 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ALTAYT 7 ALTAYT Sbjct: 59 ALTAYT 64>NP_001229695 Length = 685 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 TAYTPR 9 T YTPR Sbjct: 24 TGYTPR 29>NP_004737 Length = 977 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 TAYTPR 9 T YTPR Sbjct: 326 TGYTPR 331>NP_001003809 Length = 675 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 TAYTPR 9 T YTPR Sbjct: 24 TGYTPR 29>NP_001229693 Length = 683 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 TAYTPR 9 T YTPR Sbjct: 32 TGYTPR 37>NP_001229690 Length = 929 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 TAYTPR 9 T YTPR Sbjct: 326 TGYTPR 331>NP_001229692 Length = 699 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 TAYTPR 9 T YTPR Sbjct: 38 TGYTPR 43>NP_001229691 Length = 661 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 TAYTPR 9 T YTPR Sbjct: 38 TGYTPR 43>NP_853514 Length = 1732 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LTAYTPR 9 LTA TPR Sbjct: 310 LTALTPR 316>NP_821158 Length = 662 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SALTAYTP 8 SAL AY+P Sbjct: 11 SALGAYSP 18>NP_001229694 Length = 627 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 TAYTPR 9 T YTPR Sbjct: 24 TGYTPR 29>NP_005112 Length = 2174 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TAYTPR 9 TAYTP+ Sbjct: 974 TAYTPQ 979>NP_001180444 Length = 432 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ALTAYT 7 ALTAYT Sbjct: 30 ALTAYT 35>NP_001167627 Length = 415 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LTAYTPR 9 +T YTPR Sbjct: 312 VTEYTPR 318>XP_005258233 Length = 672 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 TAYTPR 9 T YTPR Sbjct: 11 TGYTPR 16>XP_005258232 Length = 693 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 TAYTPR 9 T YTPR Sbjct: 32 TGYTPR 37>XP_005258231 Length = 695 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 TAYTPR 9 T YTPR Sbjct: 34 TGYTPR 39>XP_006722430 Length = 731 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 TAYTPR 9 T YTPR Sbjct: 70 TGYTPR 75>XP_005258230 Length = 737 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 TAYTPR 9 T YTPR Sbjct: 76 TGYTPR 81>XP_005258229 Length = 987 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 TAYTPR 9 T YTPR Sbjct: 326 TGYTPR 331>XP_005258228 Length = 987 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 TAYTPR 9 T YTPR Sbjct: 326 TGYTPR 331>XP_005269598 Length = 415 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LTAYTPR 9 +T YTPR Sbjct: 312 VTEYTPR 318>XP_006712109 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ALTAYT 7 ALTAYT Sbjct: 59 ALTAYT 64>NP_001116512 Length = 290 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TAYTPR 9 +AYTPR Sbjct: 220 SAYTPR 225>NP_940820 Length = 887 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LTAYTPR 9 LTA TPR Sbjct: 870 LTAETPR 876>NP_001028776 Length = 852 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LTAYTPR 9 LTA TPR Sbjct: 835 LTAETPR 841>NP_001028777 Length = 882 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LTAYTPR 9 LTA TPR Sbjct: 865 LTAETPR 871>NP_055266 Length = 847 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LTAYTPR 9 LTA TPR Sbjct: 830 LTAETPR 836>NP_001263309 Length = 851 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LTAYTPR 9 LTAY P+ Sbjct: 489 LTAYKPK 495>NP_057733 Length = 851 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LTAYTPR 9 LTAY P+ Sbjct: 489 LTAYKPK 495>NP_076425 Length = 218 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ALTAYTP 8 A TA+TP Sbjct: 149 AFTAFTP 155>NP_078978 Length = 723 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LTAYTPR 9 L AY+PR Sbjct: 641 LAAYSPR 647>XP_005255569 Length = 225 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ALTAYTP 8 A TA+TP Sbjct: 156 AFTAFTP 162>XP_005255568 Length = 248 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ALTAYTP 8 A TA+TP Sbjct: 179 AFTAFTP 185>XP_006715751 Length = 796 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LTAYTPR 9 LTA TPR Sbjct: 779 LTAETPR 785>XP_005249757 Length = 886 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LTAYTPR 9 LTA TPR Sbjct: 870 LTAETPR 876>XP_006715750 Length = 887 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LTAYTPR 9 LTA TPR Sbjct: 870 LTAETPR 876>XP_006713833 Length = 470 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ALTAYTPR 9 ALT++ PR Sbjct: 43 ALTSFLPR 50>XP_006713832 Length = 480 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ALTAYTPR 9 ALT++ PR Sbjct: 14 ALTSFLPR 21>XP_006713831 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ALTAYTPR 9 ALT++ PR Sbjct: 43 ALTSFLPR 50Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.118 0.332 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 608,349 Number of extensions: 951 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |