Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005350 18 1935 NP_055892 17 2528 NP_061985 17 4312 NP_219489 17 4312 XP_005260665 17 4312 XP_006723948 17 4312 XP_006722680 17 4312 XP_006722679 17 4312 NP_001276332 16 5631 NP_001244947 16 5631 NP_001276334 16 5631 NP_758962 16 5631 NP_001244946 16 5631 NP_071757 16 5631 NP_690863 16 5631 XP_005253685 16 5631 XP_005253684 16 5631 XP_006718007 16 5631 XP_005247955 16 5631 XP_005247954 16 5631 XP_005247953 16 5631 XP_005247950 16 5631 XP_005247951 16 5631 XP_005247949 16 5631 XP_005247948 16 5631 NP_003950 16 5631 NP_150279 16 5631 NP_002199 16 7355 NP_060170 16 7355 NP_072047 16 7355 NP_001276103 16 7355 NP_001276105 16 7355 NP_001276104 16 7355 NP_001229658 16 7355 NP_001018861 16 7355 XP_005254448 16 7355 XP_006720593 16 7355 XP_005254446 16 7355 NP_079023 15 9605 NP_001025056 15 9605 NP_006280 15 9605 NP_001271175 15 9605 NP_056371 15 9605 NP_001271176 15 9605 NP_001271174 15 9605 NP_775885 15 9605 NP_001004060 15 9605 NP_001003681 15 9605 NP_003239 15 9605 NP_001004067 15 9605 XP_006725258 15 9605 XP_006724165 15 9605 XP_006724164 15 9605 XP_006724163 15 9605 XP_005255375 15 9605 XP_005267576 15 9605 XP_006720175 15 9605 XP_006720174 15 9605 XP_005267573 15 9605 XP_006720173 15 9605 XP_006720172 15 9605 XP_005267571 15 9605 XP_006716915 15 9605 XP_005251621 15 9605 XP_005250117 15 9605 XP_006712138 15 9605 XP_005244859 15 9605 XP_005244858 15 9605 NP_003583 15 9605 NP_055102 15 9605>NP_005350 Length = 552 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RALQLLGEV 9 RALQLL EV Sbjct: 531 RALQLLDEV 539>NP_055892 Length = 724 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 RALQLLGE 8 RAL+LLGE Sbjct: 392 RALRLLGE 399>NP_061985 Length = 2146 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 RALQLLGE 8 RALQLL E Sbjct: 424 RALQLLAE 431>NP_219489 Length = 373 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RALQLLGE 8 +ALQLLG+ Sbjct: 308 KALQLLGD 315>XP_005260665 Length = 275 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RALQLLGE 8 +ALQLLG+ Sbjct: 210 KALQLLGD 217>XP_006723948 Length = 367 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RALQLLGE 8 +ALQLLG+ Sbjct: 302 KALQLLGD 309>XP_006722680 Length = 1636 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 RALQLLGE 8 RALQLL E Sbjct: 424 RALQLLAE 431>XP_006722679 Length = 2128 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 RALQLLGE 8 RALQLL E Sbjct: 424 RALQLLAE 431>NP_001276332 Length = 987 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RALQLLGEV 9 RA+QLL +V Sbjct: 67 RAIQLLSQV 75>NP_001244947 Length = 589 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ALQLLGEV 9 A+QLLG+V Sbjct: 247 AVQLLGDV 254>NP_001276334 Length = 1030 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RALQLLGEV 9 RA+QLL +V Sbjct: 67 RAIQLLSQV 75>NP_758962 Length = 589 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ALQLLGEV 9 A+QLLG+V Sbjct: 247 AVQLLGDV 254>NP_001244946 Length = 589 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ALQLLGEV 9 A+QLLG+V Sbjct: 247 AVQLLGDV 254>NP_071757 Length = 1030 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RALQLLGEV 9 RA+QLL +V Sbjct: 67 RAIQLLSQV 75>NP_690863 Length = 567 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ALQLLGEV 9 A+QLLG+V Sbjct: 225 AVQLLGDV 232>XP_005253685 Length = 1061 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RALQLLGEV 9 RAL+L+G++ Sbjct: 724 RALELMGQL 732>XP_005253684 Length = 1073 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RALQLLGEV 9 RAL+L+G++ Sbjct: 736 RALELMGQL 744>XP_006718007 Length = 1050 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RALQLLGEV 9 RA+QLL +V Sbjct: 88 RAIQLLSQV 96>XP_005247955 Length = 936 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQLLGE 8 RAL +LGE Sbjct: 504 RALNMLGE 511>XP_005247954 Length = 1024 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQLLGE 8 RAL +LGE Sbjct: 592 RALNMLGE 599>XP_005247953 Length = 1114 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQLLGE 8 RAL +LGE Sbjct: 682 RALNMLGE 689>XP_005247950 Length = 1115 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQLLGE 8 RAL +LGE Sbjct: 683 RALNMLGE 690>XP_005247951 Length = 1115 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQLLGE 8 RAL +LGE Sbjct: 683 RALNMLGE 690>XP_005247949 Length = 1115 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQLLGE 8 RAL +LGE Sbjct: 683 RALNMLGE 690>XP_005247948 Length = 1115 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQLLGE 8 RAL +LGE Sbjct: 683 RALNMLGE 690>NP_003950 Length = 1068 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RALQLLGEV 9 RAL+L+G++ Sbjct: 731 RALELMGQL 739>NP_150279 Length = 1114 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQLLGE 8 RAL +LGE Sbjct: 682 RALNMLGE 689>NP_002199 Length = 1179 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LQLLGEV 9 LQ+LGE+ Sbjct: 1087 LQILGEI 1093>NP_060170 Length = 219 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ALQLLGEV 9 A+Q++GEV Sbjct: 165 AMQVIGEV 172>NP_072047 Length = 723 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RALQLLGEV 9 R +QLLG++ Sbjct: 531 RTMQLLGQL 539>NP_001276103 Length = 656 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RALQLLGEV 9 R +QLLG++ Sbjct: 464 RTMQLLGQL 472>NP_001276105 Length = 534 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RALQLLGEV 9 R +QLLG++ Sbjct: 342 RTMQLLGQL 350>NP_001276104 Length = 598 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RALQLLGEV 9 R +QLLG++ Sbjct: 406 RTMQLLGQL 414>NP_001229658 Length = 777 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ALQLLGEV 9 A+Q++GEV Sbjct: 165 AMQVIGEV 172>NP_001018861 Length = 603 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LQLLGEV 9 LQLLGE+ Sbjct: 569 LQLLGEM 575>XP_005254448 Length = 602 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LQLLGEV 9 LQLLGE+ Sbjct: 568 LQLLGEM 574>XP_006720593 Length = 603 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LQLLGEV 9 LQLLGE+ Sbjct: 569 LQLLGEM 575>XP_005254446 Length = 603 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LQLLGEV 9 LQLLGE+ Sbjct: 569 LQLLGEM 575>NP_079023 Length = 775 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQLLGE 8 RAL +LGE Sbjct: 607 RALAVLGE 614>NP_001025056 Length = 214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RALQLLGE 8 +A+Q+LGE Sbjct: 182 QAVQMLGE 189>NP_006280 Length = 2541 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 QLLGEV 9 QLLGEV Sbjct: 1104 QLLGEV 1109>NP_001271175 Length = 1782 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LQLLGE 8 LQLLGE Sbjct: 642 LQLLGE 647>NP_056371 Length = 1804 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LQLLGE 8 LQLLGE Sbjct: 642 LQLLGE 647>NP_001271176 Length = 1803 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LQLLGE 8 LQLLGE Sbjct: 642 LQLLGE 647>NP_001271174 Length = 1783 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LQLLGE 8 LQLLGE Sbjct: 642 LQLLGE 647>NP_775885 Length = 1222 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RALQLLGEV 9 R+LQL G+V Sbjct: 532 RSLQLSGKV 540>NP_001004060 Length = 1267 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RALQLLGEV 9 R+LQL G+V Sbjct: 532 RSLQLSGKV 540>NP_001003681 Length = 601 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LQLLGE 8 LQLLGE Sbjct: 528 LQLLGE 533>NP_003239 Length = 961 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 QLLGEV 9 QLLGEV Sbjct: 232 QLLGEV 237>NP_001004067 Length = 1222 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RALQLLGEV 9 R+LQL G+V Sbjct: 532 RSLQLSGKV 540>XP_006725258 Length = 1267 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RALQLLGEV 9 R+LQL G+V Sbjct: 532 RSLQLSGKV 540>XP_006724165 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LQLLGE 8 LQLLGE Sbjct: 419 LQLLGE 424>XP_006724164 Length = 603 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LQLLGE 8 LQLLGE Sbjct: 571 LQLLGE 576>XP_006724163 Length = 644 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LQLLGE 8 LQLLGE Sbjct: 571 LQLLGE 576>XP_005255375 Length = 1267 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RALQLLGEV 9 R+LQL G+V Sbjct: 532 RSLQLSGKV 540>XP_005267576 Length = 1782 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LQLLGE 8 LQLLGE Sbjct: 642 LQLLGE 647>XP_006720175 Length = 1783 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LQLLGE 8 LQLLGE Sbjct: 642 LQLLGE 647>XP_006720174 Length = 1803 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LQLLGE 8 LQLLGE Sbjct: 642 LQLLGE 647>XP_005267573 Length = 1804 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LQLLGE 8 LQLLGE Sbjct: 642 LQLLGE 647>XP_006720173 Length = 1804 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LQLLGE 8 LQLLGE Sbjct: 642 LQLLGE 647>XP_006720172 Length = 1804 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LQLLGE 8 LQLLGE Sbjct: 642 LQLLGE 647>XP_005267571 Length = 1804 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LQLLGE 8 LQLLGE Sbjct: 642 LQLLGE 647>XP_006716915 Length = 2542 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 QLLGEV 9 QLLGEV Sbjct: 1104 QLLGEV 1109>XP_005251621 Length = 2542 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 QLLGEV 9 QLLGEV Sbjct: 1104 QLLGEV 1109>XP_005250117 Length = 776 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 QLLGEV 9 QLLGEV Sbjct: 729 QLLGEV 734>XP_006712138 Length = 678 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ALQLLGEV 9 +LQ+LGE+ Sbjct: 499 SLQILGEL 506>XP_005244859 Length = 151 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RALQLLGE 8 +A+Q+LGE Sbjct: 119 QAVQMLGE 126>XP_005244858 Length = 214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RALQLLGE 8 +A+Q+LGE Sbjct: 182 QAVQMLGE 189>NP_003583 Length = 776 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 QLLGEV 9 QLLGEV Sbjct: 729 QLLGEV 734>NP_055102 Length = 1222 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RALQLLGEV 9 R+LQL G+V Sbjct: 532 RSLQLSGKV 540Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.145 0.367 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 438,324 Number of extensions: 607 Number of successful extensions: 70 Number of sequences better than 10000.0: 70 Number of HSP's gapped: 70 Number of HSP's successfully gapped: 70 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |