Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000236 19 665 NP_001120972 19 665 XP_006716054 19 665 XP_006716053 19 665 XP_006716052 19 665 XP_006716051 19 665 NP_061028 18 1482 NP_000598 17 4312 NP_036588 17 4312 NP_115896 17 4312 NP_001171672 17 4312 XP_006715291 17 4312 NP_000599 17 4312 NP_060947 17 4312 NP_073744 16 5631 NP_001030611 16 5631 XP_005252192 16 5631 NP_060365 16 5631 NP_001265010 16 5631 NP_000055 16 7355 NP_001258665 16 7355 NP_057141 16 7355 NP_001258664 16 7355 NP_005158 16 7355 NP_003809 16 7355 NP_683721 16 7355 NP_001363 16 7355 NP_001010891 16 7355 NP_001161213 16 7355 NP_004195 16 7355 XP_006723723 16 7355 XP_006721530 16 7355 XP_006721529 16 7355 XP_006721528 16 7355 XP_005248552 16 7355 NP_001077861 15 9605 NP_001346 15 9605 NP_958434 15 9605 NP_004359 15 9605 NP_001139729 15 9605 NP_004739 15 9605 NP_001191379 15 9605 NP_065790 15 9605 NP_001269328 15 9605 NP_003846 15 9605 NP_954854 15 9605 NP_068777 15 9605 XP_006725469 15 9605 XP_006712886 15 9605 XP_005264096 15 9605 NP_004051 15 9605>NP_000236 Length = 1390 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LDRILSKYF 9 LD ILSKYF Sbjct: 823 LDGILSKYF 831>NP_001120972 Length = 1408 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LDRILSKYF 9 LD ILSKYF Sbjct: 841 LDGILSKYF 849>XP_006716054 Length = 960 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LDRILSKYF 9 LD ILSKYF Sbjct: 393 LDGILSKYF 401>XP_006716053 Length = 960 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LDRILSKYF 9 LD ILSKYF Sbjct: 393 LDGILSKYF 401>XP_006716052 Length = 1409 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LDRILSKYF 9 LD ILSKYF Sbjct: 842 LDGILSKYF 850>XP_006716051 Length = 1427 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LDRILSKYF 9 LD ILSKYF Sbjct: 860 LDGILSKYF 868>NP_061028 Length = 632 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LDRILSKY 8 LDR+LS+Y Sbjct: 63 LDRVLSRY 70>NP_000598 Length = 201 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LDRILSKYF 9 LDRI K+F Sbjct: 36 LDRITGKWF 44>NP_036588 Length = 90 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDRILSKY 8 LDR +SKY Sbjct: 51 LDRCVSKY 58>NP_115896 Length = 809 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LDRILSKY 8 +D+I+SKY Sbjct: 742 MDQIISKY 749>NP_001171672 Length = 809 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LDRILSKY 8 +D+I+SKY Sbjct: 742 MDQIISKY 749>XP_006715291 Length = 558 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LDRILSKY 8 +D+I+SKY Sbjct: 491 MDQIISKY 498>NP_000599 Length = 201 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LDRILSKYF 9 LDRI K+F Sbjct: 36 LDRITGKWF 44>NP_060947 Length = 417 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LDRILSKYF 9 L R+L KYF Sbjct: 105 LTRVLFKYF 113>NP_073744 Length = 746 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LDRILSKY 8 L+R+L KY Sbjct: 473 LERVLKKY 480>NP_001030611 Length = 733 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LDRILSKY 8 L+R+L KY Sbjct: 460 LERVLKKY 467>XP_005252192 Length = 735 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LDRILSKY 8 L+R+L KY Sbjct: 462 LERVLKKY 469>NP_060365 Length = 796 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DRILSKYF 9 DR+L +YF Sbjct: 374 DRMLDEYF 381>NP_001265010 Length = 173 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LDRILSKYF 9 +DRI SK+F Sbjct: 97 VDRIPSKHF 105>NP_000055 Length = 1663 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LDRILSKY 8 +DR +SKY Sbjct: 1425 VDRYISKY 1432>NP_001258665 Length = 185 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 DRILSKYF 9 DR+ +KY+ Sbjct: 32 DRLFAKYY 39>NP_057141 Length = 177 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 DRILSKYF 9 DR+ +KY+ Sbjct: 24 DRLFAKYY 31>NP_001258664 Length = 160 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 DRILSKYF 9 DR+ +KY+ Sbjct: 24 DRLFAKYY 31>NP_005158 Length = 505 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LDRILSKY 8 +DR+LS Y Sbjct: 443 VDRVLSAY 450>NP_003809 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RILSKY 8 RILSKY Sbjct: 160 RILSKY 165>NP_683721 Length = 760 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LDRILSKYF 9 LD++L ++F Sbjct: 340 LDQVLGRFF 348>NP_001363 Length = 4486 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LDRILSKYF 9 LD++ S YF Sbjct: 281 LDKLQSSYF 289>NP_001010891 Length = 248 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DRILSKYF 9 D ILS YF Sbjct: 234 DDILSSYF 241>NP_001161213 Length = 251 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DRILSKYF 9 D ILS YF Sbjct: 173 DDILSSYF 180>NP_004195 Length = 581 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LDRILSKYF 9 LD++L ++F Sbjct: 340 LDQVLGRFF 348>XP_006723723 Length = 394 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RILSKY 8 RILSKY Sbjct: 160 RILSKY 165>XP_006721530 Length = 2746 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LDRILSKYF 9 LD++ S YF Sbjct: 281 LDKLQSSYF 289>XP_006721529 Length = 2817 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LDRILSKYF 9 LD++ S YF Sbjct: 281 LDKLQSSYF 289>XP_006721528 Length = 3869 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LDRILSKYF 9 LD++ S YF Sbjct: 281 LDKLQSSYF 289>XP_005248552 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DRILSKYF 9 D ILS YF Sbjct: 234 DDILSSYF 241>NP_001077861 Length = 118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DRILSKYF 9 DRIL ++F Sbjct: 94 DRILIRFF 101>NP_001346 Length = 118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DRILSKYF 9 DRIL ++F Sbjct: 94 DRILIRFF 101>NP_958434 Length = 270 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DRILSKY 8 +R+LSKY Sbjct: 20 NRLLSKY 26>NP_004359 Length = 309 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DRILSKY 8 +R+LSKY Sbjct: 20 NRLLSKY 26>NP_001139729 Length = 143 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDRILSKY 8 L+R LSKY Sbjct: 125 LERQLSKY 132>NP_004739 Length = 757 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LDRILSKYF 9 LD+ ++K+F Sbjct: 677 LDQFINKFF 685>NP_001191379 Length = 807 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LDRILSKYF 9 LD+ ++K+F Sbjct: 677 LDQFINKFF 685>NP_065790 Length = 757 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LDRILSKYF 9 LD+ ++K+F Sbjct: 677 LDQFINKFF 685>NP_001269328 Length = 385 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LDRILSKYF 9 L R+L K+F Sbjct: 244 LPRVLEKHF 252>NP_003846 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LDRILSKYF 9 L R+L K+F Sbjct: 400 LPRVLEKHF 408>NP_954854 Length = 295 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LDRILSK 7 LDR LSK Sbjct: 80 LDRFLSK 86>NP_068777 Length = 488 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LDRILSKYF 9 +DRILS F Sbjct: 178 IDRILSAEF 186>XP_006725469 Length = 209 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DRILSKYF 9 DRIL ++F Sbjct: 185 DRILIRFF 192>XP_006712886 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LDRILSKYF 9 L R+L K+F Sbjct: 245 LPRVLEKHF 253>XP_005264096 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LDRILSKYF 9 L R+L K+F Sbjct: 399 LPRVLEKHF 407>NP_004051 Length = 295 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LDRILSK 7 LDR LSK Sbjct: 80 LDRFLSK 86Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.339 0.157 0.447 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 445,831 Number of extensions: 693 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |