Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_037536 16 7355 NP_005017 16 7355 NP_005814 16 7355 NP_001170826 16 7355 XP_005255091 16 7355 XP_006720900 16 7355 XP_006720899 16 7355 XP_006710753 16 7355 XP_005263530 16 7355 XP_006710752 16 7355 XP_006710751 16 7355 XP_006710750 16 7355 XP_006710749 16 7355 NP_065433 15 9605 NP_955781 15 9605 NP_060714 15 9605 NP_060547 15 9605 NP_659570 15 9605 NP_001093634 15 9605 NP_001138422 15 9605 XP_006723877 15 9605 XP_006716105 15 9605 XP_005250300 15 9605 XP_005250299 15 9605 XP_006715978 15 9605 XP_006715977 15 9605 XP_006715976 15 9605 XP_006715975 15 9605 NP_001159607 15 9605 NP_001182196 15 9605 NP_001093635 15 9605 NP_055536 15 9605 NP_055384 15 9605 NP_001093636 15 9605>NP_037536 Length = 630 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KNAKLST 7 KN KLST Sbjct: 92 KNVKLST 98>NP_005017 Length = 1044 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNAKLSTTK 9 +NA LST K Sbjct: 38 RNANLSTIK 46>NP_005814 Length = 622 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KNAKLST 7 KN KLST Sbjct: 92 KNVKLST 98>NP_001170826 Length = 622 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KNAKLST 7 KN KLST Sbjct: 92 KNVKLST 98>XP_005255091 Length = 621 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KNAKLST 7 KN KLST Sbjct: 91 KNVKLST 97>XP_006720900 Length = 622 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KNAKLST 7 KN KLST Sbjct: 92 KNVKLST 98>XP_006720899 Length = 622 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KNAKLST 7 KN KLST Sbjct: 92 KNVKLST 98>XP_006710753 Length = 1015 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNAKLSTTK 9 +NA LST K Sbjct: 38 RNANLSTIK 46>XP_005263530 Length = 1043 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNAKLSTTK 9 +NA LST K Sbjct: 38 RNANLSTIK 46>XP_006710752 Length = 1044 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNAKLSTTK 9 +NA LST K Sbjct: 38 RNANLSTIK 46>XP_006710751 Length = 1044 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNAKLSTTK 9 +NA LST K Sbjct: 38 RNANLSTIK 46>XP_006710750 Length = 1044 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNAKLSTTK 9 +NA LST K Sbjct: 38 RNANLSTIK 46>XP_006710749 Length = 1044 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNAKLSTTK 9 +NA LST K Sbjct: 38 RNANLSTIK 46>NP_065433 Length = 1091 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KNAKLSTT 8 +N K+STT Sbjct: 519 ENGKISTT 526>NP_955781 Length = 273 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KLSTTK 9 KLSTTK Sbjct: 75 KLSTTK 80>NP_060714 Length = 299 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KLSTTK 9 KLSTTK Sbjct: 75 KLSTTK 80>NP_060547 Length = 759 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AKLSTTK 9 AKL TTK Sbjct: 424 AKLQTTK 430>NP_659570 Length = 839 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KNAKLSTTK 9 KN KLS K Sbjct: 466 KNTKLSVKK 474>NP_001093634 Length = 645 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNAKLSTTK 9 +NAK TTK Sbjct: 407 ENAKCFTTK 415>NP_001138422 Length = 1573 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNAKLSTTK 9 KNAK TT+ Sbjct: 634 KNAKRPTTQ 642>XP_006723877 Length = 220 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KLSTTK 9 KLSTTK Sbjct: 75 KLSTTK 80>XP_006716105 Length = 734 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AKLSTTK 9 AKL TTK Sbjct: 424 AKLQTTK 430>XP_005250300 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KNAKLSTTK 9 KN KLS K Sbjct: 202 KNTKLSVKK 210>XP_005250299 Length = 766 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KNAKLSTTK 9 KN KLS K Sbjct: 393 KNTKLSVKK 401>XP_006715978 Length = 766 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KNAKLSTTK 9 KN KLS K Sbjct: 393 KNTKLSVKK 401>XP_006715977 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KNAKLSTTK 9 KN KLS K Sbjct: 465 KNTKLSVKK 473>XP_006715976 Length = 839 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KNAKLSTTK 9 KN KLS K Sbjct: 466 KNTKLSVKK 474>XP_006715975 Length = 839 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KNAKLSTTK 9 KN KLS K Sbjct: 466 KNTKLSVKK 474>NP_001159607 Length = 618 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AKLSTTK 9 AKL TTK Sbjct: 283 AKLQTTK 289>NP_001182196 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNAKLSTTK 9 KNAK TT+ Sbjct: 634 KNAKRPTTQ 642>NP_001093635 Length = 565 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNAKLSTTK 9 +NAK TTK Sbjct: 327 ENAKCFTTK 335>NP_055536 Length = 634 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNAKLSTTK 9 +NAK TTK Sbjct: 396 ENAKCFTTK 404>NP_055384 Length = 839 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KNAKLSTTK 9 KN KLS K Sbjct: 466 KNTKLSVKK 474>NP_001093636 Length = 554 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNAKLSTTK 9 +NAK TTK Sbjct: 316 ENAKCFTTK 324Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.287 0.0993 0.226 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 275,116 Number of extensions: 250 Number of successful extensions: 34 Number of sequences better than 10000.0: 34 Number of HSP's gapped: 34 Number of HSP's successfully gapped: 34 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |