Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245202 18 1935 NP_001245200 18 1935 NP_001161091 18 1935 NP_000240 18 1935 NP_001161090 18 1935 NP_001161089 18 1935 NP_001245203 18 1935 XP_005265221 18 1935 XP_005265220 18 1935 NP_001013649 17 4312 XP_006724707 17 4312 NP_065753 16 7355 XP_006716871 16 7355 XP_006710602 16 7355 XP_006710601 16 7355 XP_006710598 16 7355 XP_006710597 16 7355 XP_006710596 16 7355 XP_006710595 16 7355 XP_006710594 16 7355 XP_006710593 16 7355 XP_006710592 16 7355 XP_006710591 16 7355 XP_006710590 16 7355 XP_006710589 16 7355 XP_006710588 16 7355 XP_006710587 16 7355 XP_006710586 16 7355 XP_006710585 16 7355 XP_005270755 16 7355 XP_006710584 16 7355 XP_005270754 16 7355 XP_005270753 16 7355 XP_006710583 16 7355 XP_005270752 16 7355 XP_006710582 16 7355 XP_005270751 16 7355 NP_003740 15 9605 NP_001243888 15 9605 NP_001277 15 9605>NP_001245202 Length = 515 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESISLRKAI 9 ES SLRKAI Sbjct: 27 ESTSLRKAI 35>NP_001245200 Length = 687 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESISLRKAI 9 ES SLRKAI Sbjct: 268 ESTSLRKAI 276>NP_001161091 Length = 515 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESISLRKAI 9 ES SLRKAI Sbjct: 27 ESTSLRKAI 35>NP_000240 Length = 756 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESISLRKAI 9 ES SLRKAI Sbjct: 268 ESTSLRKAI 276>NP_001161090 Length = 515 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESISLRKAI 9 ES SLRKAI Sbjct: 27 ESTSLRKAI 35>NP_001161089 Length = 658 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESISLRKAI 9 ES SLRKAI Sbjct: 170 ESTSLRKAI 178>NP_001245203 Length = 515 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESISLRKAI 9 ES SLRKAI Sbjct: 27 ESTSLRKAI 35>XP_005265221 Length = 515 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESISLRKAI 9 ES SLRKAI Sbjct: 27 ESTSLRKAI 35>XP_005265220 Length = 515 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESISLRKAI 9 ES SLRKAI Sbjct: 27 ESTSLRKAI 35>NP_001013649 Length = 1225 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 ESISLRKA 8 +SISLRKA Sbjct: 557 KSISLRKA 564>XP_006724707 Length = 1337 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 ESISLRKA 8 +SISLRKA Sbjct: 669 KSISLRKA 676>NP_065753 Length = 714 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SISLRKA 8 S+SLRKA Sbjct: 79 SVSLRKA 85>XP_006716871 Length = 714 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SISLRKA 8 S+SLRKA Sbjct: 79 SVSLRKA 85>XP_006710602 Length = 7391 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESISLRKAI 9 E+ISL KAI Sbjct: 2558 ENISLPKAI 2566>XP_006710601 Length = 4720 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESISLRKAI 9 E+ISL KAI Sbjct: 2718 ENISLPKAI 2726>XP_006710598 Length = 7553 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESISLRKAI 9 E+ISL KAI Sbjct: 2548 ENISLPKAI 2556>XP_006710597 Length = 7451 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESISLRKAI 9 E+ISL KAI Sbjct: 2558 ENISLPKAI 2566>XP_006710596 Length = 7512 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESISLRKAI 9 E+ISL KAI Sbjct: 2507 ENISLPKAI 2515>XP_006710595 Length = 7526 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESISLRKAI 9 E+ISL KAI Sbjct: 2521 ENISLPKAI 2529>XP_006710594 Length = 7528 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESISLRKAI 9 E+ISL KAI Sbjct: 2523 ENISLPKAI 2531>XP_006710593 Length = 7539 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESISLRKAI 9 E+ISL KAI Sbjct: 2534 ENISLPKAI 2542>XP_006710592 Length = 7544 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESISLRKAI 9 E+ISL KAI Sbjct: 2539 ENISLPKAI 2547>XP_006710591 Length = 7558 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESISLRKAI 9 E+ISL KAI Sbjct: 2553 ENISLPKAI 2561>XP_006710590 Length = 7563 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESISLRKAI 9 E+ISL KAI Sbjct: 2558 ENISLPKAI 2566>XP_006710589 Length = 7595 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESISLRKAI 9 E+ISL KAI Sbjct: 2590 ENISLPKAI 2598>XP_006710588 Length = 7614 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESISLRKAI 9 E+ISL KAI Sbjct: 2718 ENISLPKAI 2726>XP_006710587 Length = 7645 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESISLRKAI 9 E+ISL KAI Sbjct: 2718 ENISLPKAI 2726>XP_006710586 Length = 7645 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESISLRKAI 9 E+ISL KAI Sbjct: 2718 ENISLPKAI 2726>XP_006710585 Length = 7657 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESISLRKAI 9 E+ISL KAI Sbjct: 2718 ENISLPKAI 2726>XP_005270755 Length = 7663 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESISLRKAI 9 E+ISL KAI Sbjct: 2718 ENISLPKAI 2726>XP_006710584 Length = 7686 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESISLRKAI 9 E+ISL KAI Sbjct: 2718 ENISLPKAI 2726>XP_005270754 Length = 7694 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESISLRKAI 9 E+ISL KAI Sbjct: 2718 ENISLPKAI 2726>XP_005270753 Length = 7700 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESISLRKAI 9 E+ISL KAI Sbjct: 2718 ENISLPKAI 2726>XP_006710583 Length = 7702 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESISLRKAI 9 E+ISL KAI Sbjct: 2718 ENISLPKAI 2726>XP_005270752 Length = 7717 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESISLRKAI 9 E+ISL KAI Sbjct: 2718 ENISLPKAI 2726>XP_006710582 Length = 7720 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESISLRKAI 9 E+ISL KAI Sbjct: 2718 ENISLPKAI 2726>XP_005270751 Length = 7723 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESISLRKAI 9 E+ISL KAI Sbjct: 2718 ENISLPKAI 2726>NP_003740 Length = 1338 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ESISLRKA 8 E++SLRK+ Sbjct: 1178 ENVSLRKS 1185>NP_001243888 Length = 847 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ESISLRK 7 +SISLRK Sbjct: 196 QSISLRK 202>NP_001277 Length = 869 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ESISLRK 7 +SISLRK Sbjct: 218 QSISLRK 224Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.127 0.279 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 321,178 Number of extensions: 341 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |