Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 299 XP_006718908 20 299 XP_005271621 20 299 XP_006718907 20 299 XP_006718906 20 299 XP_005271619 20 299 XP_005271618 20 299 NP_036274 17 4312 XP_006720511 17 4312 NP_001265281 16 5631 NP_003861 16 5631 NP_777582 16 5631 XP_005255041 16 5631 XP_005251533 16 5631 XP_006716840 16 5631 XP_006716589 16 5631 NP_002188 16 5631 NP_997191 16 7355 NP_006217 16 7355 NP_001152956 16 7355 NP_005800 16 7355 NP_005112 16 7355 XP_006715881 16 7355 XP_005246701 16 7355 XP_005246700 16 7355 XP_006711682 16 7355 NP_001073291 15 9605 NP_000417 15 9605 NP_065115 15 9605 NP_001186704 15 9605 NP_001295 15 9605 NP_067064 15 9605 NP_001008781 15 9605 XP_005260068 15 9605 XP_005260065 15 9605 XP_005260064 15 9605 XP_005260063 15 9605 XP_005260062 15 9605 XP_005260061 15 9605 XP_006719457 15 9605 XP_006718827 15 9605 XP_005267039 15 9605 XP_005267038 15 9605>NP_000042 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 DIVDGMGI 8 DIVDGMGI Sbjct: 2913 DIVDGMGI 2920>XP_006718908 Length = 1708 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 DIVDGMGI 8 DIVDGMGI Sbjct: 1565 DIVDGMGI 1572>XP_005271621 Length = 2708 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 DIVDGMGI 8 DIVDGMGI Sbjct: 2565 DIVDGMGI 2572>XP_006718907 Length = 3050 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 DIVDGMGI 8 DIVDGMGI Sbjct: 2907 DIVDGMGI 2914>XP_006718906 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 DIVDGMGI 8 DIVDGMGI Sbjct: 2913 DIVDGMGI 2920>XP_005271619 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 DIVDGMGI 8 DIVDGMGI Sbjct: 2913 DIVDGMGI 2920>XP_005271618 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 DIVDGMGI 8 DIVDGMGI Sbjct: 2913 DIVDGMGI 2920>NP_036274 Length = 360 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 DIVDGM 6 DIVDGM Sbjct: 124 DIVDGM 129>XP_006720511 Length = 404 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 DIVDGM 6 DIVDGM Sbjct: 168 DIVDGM 173>NP_001265281 Length = 889 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IVDGMGIM 9 ++DG+GI+ Sbjct: 210 MIDGLGIL 217>NP_003861 Length = 1657 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DIVDGMGI 8 D VDG+G+ Sbjct: 5 DEVDGLGV 12>NP_777582 Length = 580 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 IVDGMG 7 +VDGMG Sbjct: 80 VVDGMG 85>XP_005255041 Length = 1191 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DIVDGMGI 8 D VDG+G+ Sbjct: 5 DEVDGLGV 12>XP_005251533 Length = 889 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IVDGMGIM 9 ++DG+GI+ Sbjct: 210 MIDGLGIL 217>XP_006716840 Length = 897 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IVDGMGIM 9 ++DG+GI+ Sbjct: 218 MIDGLGIL 225>XP_006716589 Length = 568 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 IVDGMG 7 +VDGMG Sbjct: 80 VVDGMG 85>NP_002188 Length = 889 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IVDGMGIM 9 ++DG+GI+ Sbjct: 210 MIDGLGIL 217>NP_997191 Length = 1888 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DIVDGMGI 8 DIV G+G+ Sbjct: 1522 DIVTGVGV 1529>NP_006217 Length = 1095 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VDGMGIM 9 VDG GIM Sbjct: 253 VDGNGIM 259>NP_001152956 Length = 1736 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DIVDGMGI 8 DIV G+G+ Sbjct: 1522 DIVTGVGV 1529>NP_005800 Length = 198 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IVDGMGIM 9 I+DG G++ Sbjct: 131 IIDGKGVL 138>NP_005112 Length = 2174 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 DIVDGMGI 8 D DGMGI Sbjct: 1990 DGADGMGI 1997>XP_006715881 Length = 223 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IVDGMGI 8 I+DG GI Sbjct: 141 IIDGQGI 147>XP_005246701 Length = 1016 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VDGMGIM 9 VDG GIM Sbjct: 174 VDGNGIM 180>XP_005246700 Length = 1021 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VDGMGIM 9 VDG GIM Sbjct: 179 VDGNGIM 185>XP_006711682 Length = 1739 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DIVDGMGI 8 DIV G+G+ Sbjct: 1373 DIVTGVGV 1380>NP_001073291 Length = 3118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VDGMGI 8 +DGMGI Sbjct: 2981 MDGMGI 2986>NP_000417 Length = 3122 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VDGMGI 8 +DGMGI Sbjct: 2985 MDGMGI 2990>NP_065115 Length = 352 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 DIVDGMG 7 D++DG G Sbjct: 221 DLIDGKG 227>NP_001186704 Length = 1133 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DIVDGMGIM 9 D DG GI+ Sbjct: 555 DATDGRGIL 563>NP_001295 Length = 1380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DIVDGMGIM 9 D DG GI+ Sbjct: 802 DATDGRGIL 810>NP_067064 Length = 794 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DIVDGMG 7 DI+DG G Sbjct: 59 DILDGRG 65>NP_001008781 Length = 4557 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 IVDGMG 7 IVDG+G Sbjct: 4252 IVDGLG 4257>XP_005260068 Length = 962 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DIVDGMG 7 DI+DG G Sbjct: 59 DILDGRG 65>XP_005260065 Length = 1152 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DIVDGMG 7 DI+DG G Sbjct: 59 DILDGRG 65>XP_005260064 Length = 1699 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DIVDGMG 7 DI+DG G Sbjct: 59 DILDGRG 65>XP_005260063 Length = 1756 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DIVDGMG 7 DI+DG G Sbjct: 59 DILDGRG 65>XP_005260062 Length = 1832 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DIVDGMG 7 DI+DG G Sbjct: 59 DILDGRG 65>XP_005260061 Length = 1889 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DIVDGMG 7 DI+DG G Sbjct: 59 DILDGRG 65>XP_006719457 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 DIVDGMG 7 D++DG G Sbjct: 184 DLIDGKG 190>XP_006718827 Length = 3479 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 IVDGMG 7 IVDG+G Sbjct: 3142 IVDGLG 3147>XP_005267039 Length = 3206 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VDGMGI 8 +DGMGI Sbjct: 3069 MDGMGI 3074>XP_005267038 Length = 3210 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VDGMGI 8 +DGMGI Sbjct: 3073 MDGMGI 3078Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.330 0.157 0.458 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 637,323 Number of extensions: 986 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |