Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245200 19 665 NP_000240 19 665 NP_001161089 19 665 XP_005265218 19 665 XP_006716126 18 1935 XP_005250566 18 1935 XP_005250565 18 1935 NP_001120829 18 1935 NP_001120830 18 1935 NP_065165 18 1935 NP_004645 17 4312 NP_079279 17 4312 NP_003961 17 4312 NP_001034680 17 4312 NP_001034679 17 4312 XP_005272733 17 4312 XP_005272732 17 4312 XP_006716300 17 4312 NP_001167554 16 5631 NP_001167553 16 5631 NP_060322 16 5631 NP_001167552 16 5631 NP_000515 16 7355 NP_003704 16 7355 NP_060639 16 7355 XP_006719162 16 7355 XP_005253462 16 7355 NP_006197 15 9605 NP_000673 15 9605 NP_000543 15 9605 NP_002196 15 9605 NP_061869 15 9605 NP_001136112 15 9605 NP_057416 15 9605 NP_001004439 15 9605 NP_006134 15 9605 NP_775871 15 9605 XP_006726646 15 9605 XP_006722063 15 9605 XP_006722062 15 9605 XP_006722061 15 9605 XP_006722060 15 9605 XP_005257605 15 9605 XP_005257604 15 9605 XP_006722059 15 9605 XP_005254285 15 9605 XP_006714104 15 9605 XP_005265800 15 9605 XP_006714103 15 9605 XP_006714102 15 9605 NP_115267 15 9605 NP_061746 15 9605>NP_001245200 Length = 687 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SIFGNAVS 9 SIFGNAVS Sbjct: 218 SIFGNAVS 225>NP_000240 Length = 756 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SIFGNAVS 9 SIFGNAVS Sbjct: 218 SIFGNAVS 225>NP_001161089 Length = 658 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SIFGNAVS 9 SIFGNAVS Sbjct: 120 SIFGNAVS 127>XP_005265218 Length = 687 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SIFGNAVS 9 SIFGNAVS Sbjct: 218 SIFGNAVS 225>XP_006716126 Length = 708 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 IFGNAVS 9 IFGNAVS Sbjct: 424 IFGNAVS 430>XP_005250566 Length = 751 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 IFGNAVS 9 IFGNAVS Sbjct: 467 IFGNAVS 473>XP_005250565 Length = 751 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 IFGNAVS 9 IFGNAVS Sbjct: 467 IFGNAVS 473>NP_001120829 Length = 751 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 IFGNAVS 9 IFGNAVS Sbjct: 467 IFGNAVS 473>NP_001120830 Length = 747 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 IFGNAVS 9 IFGNAVS Sbjct: 463 IFGNAVS 469>NP_065165 Length = 747 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 IFGNAVS 9 IFGNAVS Sbjct: 463 IFGNAVS 469>NP_004645 Length = 2555 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CSIFGNA 7 CS+FG A Sbjct: 578 CSLFGEA 584>NP_079279 Length = 1910 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SIFGNAV 8 +IFGNAV Sbjct: 1824 TIFGNAV 1830>NP_003961 Length = 1465 Score = 16.5 bits (31), Expect = 4312 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 CSIFGN 6 C++FGN Sbjct: 1366 CTVFGN 1371>NP_001034680 Length = 2554 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CSIFGNA 7 CS+FG A Sbjct: 577 CSLFGEA 583>NP_001034679 Length = 2570 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CSIFGNA 7 CS+FG A Sbjct: 577 CSLFGEA 583>XP_005272733 Length = 2559 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CSIFGNA 7 CS+FG A Sbjct: 577 CSLFGEA 583>XP_005272732 Length = 2575 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CSIFGNA 7 CS+FG A Sbjct: 577 CSLFGEA 583>XP_006716300 Length = 1445 Score = 16.5 bits (31), Expect = 4312 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 CSIFGN 6 C++FGN Sbjct: 1346 CTVFGN 1351>NP_001167554 Length = 1039 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CSIFGN 6 CSIFG+ Sbjct: 669 CSIFGS 674>NP_001167553 Length = 1040 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CSIFGN 6 CSIFG+ Sbjct: 670 CSIFGS 675>NP_060322 Length = 1062 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CSIFGN 6 CSIFG+ Sbjct: 692 CSIFGS 697>NP_001167552 Length = 1062 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CSIFGN 6 CSIFG+ Sbjct: 692 CSIFGS 697>NP_000515 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 CSIFGNA 7 C++ GNA Sbjct: 49 CAVLGNA 55>NP_003704 Length = 311 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CSIFGNAVS 9 C +FG A+S Sbjct: 132 CFLFGCAIS 140>NP_060639 Length = 1747 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CSIFGNAVS 9 CS+ GN+ S Sbjct: 717 CSVVGNSNS 725>XP_006719162 Length = 1676 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CSIFGNAVS 9 CS+ GN+ S Sbjct: 717 CSVVGNSNS 725>XP_005253462 Length = 1747 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CSIFGNAVS 9 CS+ GN+ S Sbjct: 717 CSVVGNSNS 725>NP_006197 Length = 1089 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 CSIFGNAV 8 C++F N V Sbjct: 235 CAVFNNEV 242>NP_000673 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SIFGNAV 8 +IFGNA+ Sbjct: 26 TIFGNAL 32>NP_000543 Length = 2813 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 CSIFGN 6 CS+FG+ Sbjct: 35 CSLFGS 40>NP_002196 Length = 1049 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CSIFGNAVS 9 CS+ GN V+ Sbjct: 513 CSLEGNPVA 521>NP_061869 Length = 1690 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CSIFGNA 7 CS +GNA Sbjct: 913 CSSWGNA 919>NP_001136112 Length = 1726 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CSIFGNA 7 CS +GNA Sbjct: 910 CSSWGNA 916>NP_057416 Length = 116 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 CSIFGNAV 8 CS FG V Sbjct: 4 CSFFGGEV 11>NP_001004439 Length = 1188 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 CSIFGNA 7 C+I+GN+ Sbjct: 1034 CNIWGNS 1040>NP_006134 Length = 415 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SIFGNAV 8 SIFGN++ Sbjct: 79 SIFGNSL 85>NP_775871 Length = 8384 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CSIFGNAV 8 C+I GN V Sbjct: 1048 CTILGNYV 1055>XP_006726646 Length = 453 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 CSIFGNA 7 C IFG A Sbjct: 400 CRIFGTA 406>XP_006722063 Length = 1923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CSIFGNA 7 CS +GNA Sbjct: 1146 CSSWGNA 1152>XP_006722062 Length = 1866 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CSIFGNA 7 CS +GNA Sbjct: 1149 CSSWGNA 1155>XP_006722061 Length = 1913 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CSIFGNA 7 CS +GNA Sbjct: 1149 CSSWGNA 1155>XP_006722060 Length = 1915 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CSIFGNA 7 CS +GNA Sbjct: 1149 CSSWGNA 1155>XP_005257605 Length = 1926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CSIFGNA 7 CS +GNA Sbjct: 1149 CSSWGNA 1155>XP_005257604 Length = 1962 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CSIFGNA 7 CS +GNA Sbjct: 1146 CSSWGNA 1152>XP_006722059 Length = 1965 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CSIFGNA 7 CS +GNA Sbjct: 1149 CSSWGNA 1155>XP_005254285 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 CSIFGNA 7 C+I+GN+ Sbjct: 932 CNIWGNS 938>XP_006714104 Length = 832 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 CSIFGNAV 8 C++F N V Sbjct: 260 CAVFNNEV 267>XP_005265800 Length = 1089 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 CSIFGNAV 8 C++F N V Sbjct: 235 CAVFNNEV 242>XP_006714103 Length = 1111 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 CSIFGNAV 8 C++F N V Sbjct: 257 CAVFNNEV 264>XP_006714102 Length = 1114 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 CSIFGNAV 8 C++F N V Sbjct: 260 CAVFNNEV 267>NP_115267 Length = 811 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 5/7 (71%) Query: 1 CSIFGNA 7 C + GNA Sbjct: 384 CQVLGNA 390>NP_061746 Length = 931 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 5/7 (71%) Query: 1 CSIFGNA 7 C + GNA Sbjct: 384 CQVLGNA 390Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.134 0.428 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 531,897 Number of extensions: 1241 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |