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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_000360                                                              20     509
XP_005268094                                                           20     509
NP_000224                                                              17    3301
XP_005264366                                                           17    3301
XP_006712078                                                           17    3301
NP_115691                                                              16    5631
NP_001269961                                                           16    5631
NP_001269960                                                           16    5631
NP_001269962                                                           16    5631
NP_057190                                                              16    5631
NP_878255                                                              16    5631
NP_001244305                                                           16    5631
XP_005267526                                                           16    5631
XP_005263560                                                           16    5631
NP_001193770                                                           16    7355
NP_001131074                                                           16    7355
NP_057039                                                              16    7355
XP_005264409                                                           16    7355
XP_005264408                                                           16    7355
NP_001158220                                                           15    9605
NP_001158219                                                           15    9605
NP_009142                                                              15    9605
NP_001158218                                                           15    9605
NP_116256                                                              15    9605
XP_005254442                                                           15    9605
XP_006719091                                                           15    9605
XP_006719090                                                           15    9605
XP_005253235                                                           15    9605
NP_002364                                                              15    9605

>NP_000360
          Length = 764

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   AMRLDQKIR 9
           AMRLD+KIR
Sbjct: 526 AMRLDRKIR 534



>XP_005268094
          Length = 764

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   AMRLDQKIR 9
           AMRLD+KIR
Sbjct: 526 AMRLDRKIR 534



>NP_000224
          Length = 699

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   AMRLDQKIR 9
           A+ LDQK+R
Sbjct: 471 AIHLDQKLR 479



>XP_005264366
          Length = 380

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   AMRLDQKIR 9
           A+ LDQK+R
Sbjct: 152 AIHLDQKLR 160



>XP_006712078
          Length = 389

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   AMRLDQKIR 9
           A+ LDQK+R
Sbjct: 161 AIHLDQKLR 169



>NP_115691
          Length = 321

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   MRLDQKIR 9
           M+L+QK+R
Sbjct: 156 MQLEQKVR 163



>NP_001269961
          Length = 583

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   AMRLDQKIR 9
           A++LD+K+R
Sbjct: 163 AVKLDKKLR 171



>NP_001269960
          Length = 457

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1  AMRLDQKIR 9
          A++LD+K+R
Sbjct: 37 AVKLDKKLR 45



>NP_001269962
          Length = 457

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1  AMRLDQKIR 9
          A++LD+K+R
Sbjct: 37 AVKLDKKLR 45



>NP_057190
          Length = 642

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   AMRLDQKIR 9
           A++LD+K+R
Sbjct: 222 AVKLDKKLR 230



>NP_878255
          Length = 575

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   AMRLDQKIR 9
           A++LD+K+R
Sbjct: 155 AVKLDKKLR 163



>NP_001244305
          Length = 550

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   AMRLDQKIR 9
           A++LD+K+R
Sbjct: 130 AVKLDKKLR 138



>XP_005267526
          Length = 617

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   AMRLDQKIR 9
           A++LD+K+R
Sbjct: 197 AVKLDKKLR 205



>XP_005263560
          Length = 254

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2  MRLDQKIR 9
          M+L+QK+R
Sbjct: 89 MQLEQKVR 96



>NP_001193770
          Length = 453

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   RLDQKI 8
           RLDQKI
Sbjct: 432 RLDQKI 437



>NP_001131074
          Length = 274

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  MRLDQKI 8
          +R+DQKI
Sbjct: 80 LRIDQKI 86



>NP_057039
          Length = 297

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   MRLDQKI 8
           +R+DQKI
Sbjct: 103 LRIDQKI 109



>XP_005264409
          Length = 170

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   MRLDQKI 8
           +R+DQKI
Sbjct: 103 LRIDQKI 109



>XP_005264408
          Length = 297

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   MRLDQKI 8
           +R+DQKI
Sbjct: 103 LRIDQKI 109



>NP_001158220
          Length = 419

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   MRLDQKIR 9
           +RL+QKI+
Sbjct: 207 VRLEQKIK 214



>NP_001158219
          Length = 419

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   MRLDQKIR 9
           +RL+QKI+
Sbjct: 207 VRLEQKIK 214



>NP_009142
          Length = 392

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   MRLDQKIR 9
           +RL+QKI+
Sbjct: 207 VRLEQKIK 214



>NP_001158218
          Length = 419

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   MRLDQKIR 9
           +RL+QKI+
Sbjct: 207 VRLEQKIK 214



>NP_116256
          Length = 695

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   RLDQKIR 9
           RL+QK+R
Sbjct: 622 RLEQKLR 628



>XP_005254442
          Length = 3041

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4    LDQKIR 9
            LDQK+R
Sbjct: 1737 LDQKVR 1742



>XP_006719091
          Length = 419

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   MRLDQKIR 9
           +RL+QKI+
Sbjct: 207 VRLEQKIK 214



>XP_006719090
          Length = 419

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   MRLDQKIR 9
           +RL+QKI+
Sbjct: 207 VRLEQKIK 214



>XP_005253235
          Length = 696

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   RLDQKIR 9
           RL+QK+R
Sbjct: 623 RLEQKLR 629



>NP_002364
          Length = 2803

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4    LDQKIR 9
            LDQK+R
Sbjct: 1499 LDQKVR 1504



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.336    0.141    0.362 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 422,314
Number of extensions: 554
Number of successful extensions: 29
Number of sequences better than 10000.0: 29
Number of HSP's gapped: 29
Number of HSP's successfully gapped: 29
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.4 bits)
S2: 28 (15.4 bits)