Welcome to Entry Card of Peptide


Details of CancerPDF_ID CancerPDF_ID3517
Primary information
CancerPDF_IDCancerPDF_ID3517
PMID27026199
Peptide SequenceSNGNpGPPGPSGSPGKDGPPGpAGNTGApGSpGVSGPKGDAGQPG
Peptide Sequence in PublicationSNGNpGPPGPSGSPGKDGPPGpAGNTGApGSpGVSGPKGDAGQPG
Protein NameCollagen alpha-1(III) chain
UniprotKB Entry NameCOL3A1_HUMAN
BiofluidUrine
M/ZNA
ChargeNA
Mass/H+NA
Mass (in Daltons)3906.8
Profiling Technique"CE-MS, Micro-TOF-MS"
Peptide Identification TechniqueMS-MS
Quantification TechniqueNA
LabelingLabel Free
FDRNA
p-Valueless than 0.05
SoftwareProteome Discoverer 1.2
Length of Peptide45
Cancer TypeBladder cancer
Database for Peptide searchUniprot Human non-redundant Database
Modificationp:Hydroxy-Proline
Number of Patients 451 for training (341 patients and 110 normal) and 270 for testing(168 primary UBC patients and 102 normal controls);
Regulation/Differential ExpressionDifferentially expressed between primary UBC and normal individual
ValidationIndependent Validation
SensitivityFor testing dataset 91%
SpecificityFor testing dataset 68%
AccuracyFor testing dataset 76%
Secondary information
Peptide AtlasNA
IEDB