Primary information |
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CancerPDF_ID | CancerPDF_ID3509 |
PMID | 27026199 |
Peptide Sequence | GLPGPKGEKGApGDFGpRGDQGQDGAAGpPGPpG |
Peptide Sequence in Publication | GLPGPKGEKGApGDFGpRGDQGQDGAAGpPGPpG |
Protein Name | Collagen alpha-1(XXIII) chain |
UniprotKB Entry Name | COL23A1_HUMAN |
Biofluid | Urine |
M/Z | NA |
Charge | NA |
Mass/H+ | NA |
Mass (in Daltons) | 3158.42 |
Profiling Technique | "CE-MS, Micro-TOF-MS" |
Peptide Identification Technique | MS-MS |
Quantification Technique | NA |
Labeling | Label Free |
FDR | NA |
p-Value | less than 0.05 |
Software | Proteome Discoverer 1.2 |
Length of Peptide | 34 |
Cancer Type | Bladder cancer |
Database for Peptide search | Uniprot Human non-redundant Database |
Modification | p:Hydroxy-Proline |
Number of Patients | 451 for training (341 patients and 110 normal) and 270 for testing(168 primary UBC patients and 102 normal controls); |
Regulation/Differential Expression | Differentially expressed between primary UBC and normal individual |
Validation | Independent Validation |
Sensitivity | For testing dataset 91% |
Specificity | For testing dataset 68% |
Accuracy | For testing dataset 76% |
Secondary information |
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Peptide Atlas | NA |
IEDB | |