Welcome to Entry Card of Peptide


Details of CancerPDF_ID CancerPDF_ID3472
Primary information
CancerPDF_IDCancerPDF_ID3472
PMID27026199
Peptide SequencepPGPTGPGGDKGDTGPpGPQG
Peptide Sequence in PublicationpPGPTGPGGDKGDTGPpGPQG
Protein Name"Collagen alpha-1(III) chain, COL3A1"
UniprotKB Entry NameCOL3A1_HUMAN
BiofluidUrine
M/ZNA
ChargeNA
Mass/H+NA
Mass (in Daltons)1873.83
Profiling Technique"CE-MS, Micro-TOF-MS"
Peptide Identification TechniqueMS-MS
Quantification TechniqueNA
LabelingLabel Free
FDRNA
p-Valueless than 0.05
SoftwareProteome Discoverer 1.2
Length of Peptide21
Cancer TypeBladder cancer
Database for Peptide searchUniprot Human non-redundant Database
Modificationp:Hydroxy-Proline
Number of Patients 451 for training (341 patients and 110 normal) and 270 for testing(168 primary UBC patients and 102 normal controls);
Regulation/Differential ExpressionDifferentially expressed between primary UBC and normal individual
ValidationIndependent Validation
SensitivityFor testing dataset 91%
SpecificityFor testing dataset 68%
AccuracyFor testing dataset 76%
Secondary information
Peptide AtlasNA
IEDB