Welcome to Entry Card of Peptide


Details of CancerPDF_ID CancerPDF_ID3407
Primary information
CancerPDF_IDCancerPDF_ID3407
PMID24565027
Peptide SequenceQVLPVGVLGPPGQQAPPPYPGPHPAGPPVIQQPTTPMFVAPPPK
Peptide Sequence in PublicationQVLP^VGVLGPPGQQAPPPYPGPHPAGPPVIQQPTTPMFVAPPPK
Protein NameProtein polybromo-1
UniprotKB Entry NamePB1_HUMAN
BiofluidPlasma
M/ZNA
ChargeNA
Mass/H+NA
Mass (in Daltons)NA
Profiling TechniqueLinear ion-trap mass spectrometer (LTQ) coupled with a Surveyor HPLC-MS
Peptide Identification TechniqueMS/MS
Quantification TechniqueNA
LabelingLabel Free
FDR0.05
p-Valueless than 0.05
SoftwareSEQUEST and OMSSA
Length of Peptide44
Cancer TypeBreast cancer
Database for Peptide searchSASD (Synthetic Alternative Splicing Database)
ModificationNA
Number of Patients 40 cancer patients for each training and testing set; 40 normal individuals for each training and testing set
Regulation/Differential ExpressionDifferentially expressed between normal and patients
ValidationIndependent validation
SensitivityNA
SpecificityNA
AccuracyNA
Secondary information
Peptide AtlasNA
IEDB