Welcome to Entry Card of Peptide


Details of CancerPDF_ID CancerPDF_ID11053
Primary information
CancerPDF_IDCancerPDF_ID11053
PMID26993605
Peptide SequenceMGVVSLGSPSGEVSHPRKT
Peptide Sequence in PublicationF.MGVVSLGSPSGEVSHPRKT.R
Protein NameAlpha2-HS glycoprotein
UniprotKB Entry NameFETUA_HUMAN
BiofluidSerum
M/Z1925.5
ChargeNA
Mass/H+NA
Mass (in Daltons)NA
Profiling TechniqueMALDI-TOF
Peptide Identification TechniqueLTQ-Orbitrap-MS/MS
Quantification TechniqueNA
LabelingLabel Free
FDRless than 0.000003
p-Valueless than 0.05
SoftwareSEQUEST
Length of Peptide19
Cancer TypeEsophageal squamous cell carcinoma (ESCC)
Database for Peptide searchIPI Human Database (3.45)
ModificationNA
Number of Patients for training 100 ESCC patients and 98 healthy individuals were used and for validation 101 ESCC patients and 98 healthy individuals were used
Regulation/Differential ExpressionDownregulated in patients vs normal with mean intensity in cancer 149.51 and mean intensity in normal as 590.32
Validationexternal cross validation done
Sensitivity97% on training dataset and 97.3 on validation dataset
Specificity95.92% on training dataset and 100% on validation dataset
AccuracyNA
Secondary information
Peptide AtlasPeptideAtlas
IEDB