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Details of CancerPDF entry with Sequence VNPFRPGDSEPPPAPGAQRAQ
Primary information
sequence IDSeq_9213
Peptide sequenceVNPFRPGDSEPPPAPGAQRAQ
CancerPDF_ID CancerPDF_ID827, CancerPDF_ID2000,
PMID19795908,21136997
Protein NameZyxin,Zyxin
UniprotKB Entry NameZYX_HUMAN,ZYX_HUMAN
FluidPlasma,Serum
M/Z730.03,2187.08211
Charge3,1
Mass (in Da)NA,NA
fdrNA,NA
Profiling TechniqueLC-MS,LC-MS
Peptide Identification techniqueMALDI-TOF/TOF,LC-MS-MS/MS
Quantification TechniqueLC-MRM (multiple reaction monitoring),LC-ESI-MS
Labelled/Label FreeLabelled,Label Free
FDRless than 7%,NA
CancerPDF_ID CancerPDF_ID827, CancerPDF_ID2000,
p-ValueNA,NA
SoftwareFlexAnalysis 3.0 and Biotools 3.0 software,MASCOT(v. 2.2.01)
Length21,21
Cancer TypeDuctal adenocarcinoma of the pancreas (DAP),Colorectal cancer
DatabaseNCBI refseq Protein Database,SwissProt Database
ModificationNA,NA
Number of Patients"34 normal, 12 patients",30 patients and 30 healthy controls
RegulationNA,NA
ValidationNA,Leave One out Cross validation
SensitivityNA,NA
SpecificityNA,NA
AccuracyNA,NA
Peptide AtlasPeptideAtlas
IEDB