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Details of CancerPDF entry with Sequence VNEPSILEMS
Primary information
sequence IDSeq_9196
Peptide sequenceVNEPSILEMS
CancerPDF_ID CancerPDF_ID836, CancerPDF_ID1985,
PMID19795908,21136997
Protein NameApolipoprotein L1,Apolipoprotein-L1
UniprotKB Entry NameAPOL1_HUMAN,APOL1_HUMAN
FluidPlasma,Serum
M/Z559.77,1117.53253
Charge2,1
Mass (in Da)NA,NA
fdrNA,NA
Profiling TechniqueLC-MS,LC-MS
Peptide Identification techniqueMALDI-TOF/TOF,LC-MS-MS/MS
Quantification TechniqueLC-MRM (multiple reaction monitoring),LC-ESI-MS
Labelled/Label FreeLabelled,Label Free
FDRless than 7%,NA
CancerPDF_ID CancerPDF_ID836, CancerPDF_ID1985,
p-ValueNA,NA
SoftwareFlexAnalysis 3.0 and Biotools 3.0 software,MASCOT(v. 2.2.01)
Length10,10
Cancer TypeDuctal adenocarcinoma of the pancreas (DAP),Colorectal cancer
DatabaseNCBI refseq Protein Database,SwissProt Database
ModificationNA,NA
Number of Patients"40 normal, 23 patients",30 patients and 30 healthy controls
RegulationNA,NA
ValidationNA,Leave One out Cross validation
SensitivityNA,NA
SpecificityNA,NA
AccuracyNA,NA
Peptide AtlasPeptideAtlas
IEDB