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Details of CancerPDF entry with Sequence VKVLDAVRGSPAIN
Primary information
sequence IDSeq_9082
Peptide sequenceVKVLDAVRGSPAIN
CancerPDF_ID CancerPDF_ID158, CancerPDF_ID8604, CancerPDF_ID10127,
PMID17269714,23667664,21805675
Protein NameTransthyretin (prealbumin),Prealbumin,Transthyretin
UniprotKB Entry NameTTHY_HUMAN,TTHY_HUMAN,TTHY_HUMAN
FluidPlasma,Serum,Urine
M/ZNA,1437.83,1438.8388
Charge1,1,NA
Mass (in Da)1438.84,1439.7,NA
fdrNA,NA,NA
Profiling TechniqueMALDI-TOF,MALDI-TOF,MALDI-TOF
Peptide Identification techniqueLC-MS/MS,FT-ICR MS/MS + nano-HPLC,MALDI-TOF-MS
Quantification TechniqueNA,NA,NA
Labelled/Label FreeLabel Free,Label Free,Label Free
FDRNA,NA,1
CancerPDF_ID CancerPDF_ID158, CancerPDF_ID8604, CancerPDF_ID10127,
p-ValueNA,NA,NA
SoftwareMASCOT (v 2.1.0),MASCOT,NA
Length14,14,14
Cancer TypeNormal,"Breast cancer, Lung cancer, Rectal cancer",Muscle-invasive bladder cancer
DatabaseMSDB Human Database,NA,SwissProt Database
ModificationNA,NA,NA
Number of PatientsNA,"Breast Cancer =84, lung cancer= 70, Rectal cancer = 30patients; 500 healthy",751 bladder cancer and 127 control
RegulationNA,NA,Differentially expressed between cancer vs normal samples
ValidationNA,NA,Mann-Whitney tests and areas under receiver-operator characteristic
SensitivityNA,NA,NA
SpecificityNA,NA,NA
AccuracyNA,NA,NA
Peptide AtlasNA
IEDB