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Details of CancerPDF entry with Sequence TVKQKPSGSEMEKK
Primary information
sequence IDSeq_8669
Peptide sequenceTVKQKPSGSEMEKK
CancerPDF_ID CancerPDF_ID2268, CancerPDF_ID9591,
PMID21136997,21533267
Protein NameUncharacterized protein C10orf30,BEN domain-containing protein 7
UniprotKB Entry NameNA,BEND7_HUMAN
FluidSerum,Serum
M/Z1591.82396,796.93
Charge1,2
Mass (in Da)NA,NA
fdrNA,NA
Profiling TechniqueLC-MS,LC-MS
Peptide Identification techniqueLC-MS-MS/MS,LC/MS/MS
Quantification TechniqueLC-ESI-MS,Multiple Reaction Monitoring
Labelled/Label FreeLabel Free,Label Free
FDRNA,1.49
CancerPDF_ID CancerPDF_ID2268, CancerPDF_ID9591,
p-ValueNA,NA
SoftwareMASCOT(v. 2.2.01),MASCOT
Length14,14
Cancer TypeColorectal cancer,Lung adenocarcinoma
DatabaseSwissProt Database,Swissprot Database (57.4)
ModificationOxidation of Met,Oxidation
Number of Patients30 patients and 30 healthy controls,62 lung adenocarcinoma and 30 healthy control
RegulationNA,"Differentially expressed between earlier-stage lung cancer group (stage-I, II, and IIIa) vs normal"
ValidationLeave One out Cross validation,MRM-based validation of 19 candidates
SensitivityNA,NA
SpecificityNA,NA
AccuracyNA,NA
Peptide AtlasNA
IEDB