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Details of CancerPDF entry with Sequence TSSTSYNRGD
Primary information
sequence IDSeq_8590
Peptide sequenceTSSTSYNRGD
CancerPDF_ID CancerPDF_ID9658, CancerPDF_ID12491,
PMID21533267,26992070
Protein NameFibrinogen alpha chain,Fibrinogen alpha chain
UniprotKB Entry NameFIBA_HUMAN,FIBA_HUMAN
FluidSerum,Serum
M/Z544.23,1086.4578
Charge2,NA
Mass (in Da)NA,1087.461473
fdrNA,NA
Profiling TechniqueLC-MS,LC-MS
Peptide Identification techniqueLC/MS/MS,LC-MS/MS
Quantification TechniqueMultiple Reaction Monitoring,NA
Labelled/Label FreeLabel Free,Label Free
FDR1.49,FDR 1 %
CancerPDF_ID CancerPDF_ID9658, CancerPDF_ID12491,
p-ValueNA,NA
SoftwareMASCOT,SEQUEST and Maxquant
Length10,10
Cancer TypeLung adenocarcinoma,Melanoma
DatabaseSwissprot Database (57.4),SwissProt Database
ModificationNA,NA
Number of Patients62 lung adenocarcinoma and 30 healthy control,8 cancer samples and 4 healthy samples
Regulation"Differentially expressed between earlier-stage lung cancer group (stage-I, II, and IIIa) vs normal","Present in 3 cancer samples out of 8 cancer samples. ,Present in 2 healthy samples out of 4 healthy samples."
ValidationMRM-based validation of 19 candidates,na
SensitivityNA,NA
SpecificityNA,NA
AccuracyNA,NA
Peptide AtlasNA
IEDB177534