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Details of CancerPDF entry with Sequence TSEYQTFFNPR
Primary information
sequence IDSeq_8572
Peptide sequenceTSEYQTFFNPR
CancerPDF_ID CancerPDF_ID1841, CancerPDF_ID12487,
PMID21136997,26992070
Protein NameProthrombin,Prothrombin
UniprotKB Entry NameTHRB_HUMAN,THRB_HUMAN
FluidSerum,Serum
M/Z1388.63608,1388.6361
Charge1,NA
Mass (in Da)NA,1389.640673
fdrNA,NA
Profiling TechniqueLC-MS,LC-MS
Peptide Identification techniqueLC-MS-MS/MS,LC-MS/MS
Quantification TechniqueLC-ESI-MS,NA
Labelled/Label FreeLabel Free,Label Free
FDRNA,FDR 1 %
CancerPDF_ID CancerPDF_ID1841, CancerPDF_ID12487,
p-ValueNA,NA
SoftwareMASCOT(v. 2.2.01),SEQUEST and Maxquant
Length11,11
Cancer TypeColorectal cancer,Melanoma
DatabaseSwissProt Database,SwissProt Database
ModificationNA,NA
Number of Patients30 patients and 30 healthy controls,8 cancer samples and 4 healthy samples
RegulationNA,"Present in 5 cancer samples out of 8 cancer samples. ,Present in 2 healthy samples out of 4 healthy samples."
ValidationLeave One out Cross validation,na
SensitivityNA,NA
SpecificityNA,NA
AccuracyNA,NA
Peptide AtlasPeptideAtlas
IEDB