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Details of CancerPDF entry with Sequence TQQPQQDEMPSPTF
Primary information
sequence IDSeq_8529
Peptide sequenceTQQPQQDEMPSPTF
CancerPDF_ID CancerPDF_ID396, CancerPDF_ID7558,
PMID19795908,24982608
Protein NameApolipoprotein C-II,Apolipoprotein C-II
UniprotKB Entry NameAPOC2_HUMAN,APOC2_HUMAN
FluidPlasma,Urine
M/Z817.36,NA
Charge2,NA
Mass (in Da)NA,NA
fdrNA,NA
Profiling TechniqueLC-MS,Nano-LC-MS
Peptide Identification techniqueMALDI-TOF/TOF,MS/MS
Quantification TechniqueLC-MRM (multiple reaction monitoring),NA
Labelled/Label FreeLabelled,Label Free
FDRless than 7%,0.01
CancerPDF_ID CancerPDF_ID396, CancerPDF_ID7558,
p-ValueNA,NA
SoftwareFlexAnalysis 3.0 and Biotools 3.0 software,"GPM search engine, MASCOT"
Length14,14
Cancer TypeDuctal adenocarcinoma of the pancreas (DAP),Ovarian cancer
DatabaseNCBI refseq Protein Database,IPI 3.71 Human Database
ModificationNA,NA
Number of Patients"41 normal, 24 patients",6 Ovarian cancer patients and 6 normal individuals
RegulationNA,Uniquely present in case of urine of ovarian cancer patients
ValidationNA,NA
SensitivityNA,NA
SpecificityNA,NA
AccuracyNA,NA
Peptide AtlasPeptideAtlas
IEDB