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Details of CancerPDF entry with Sequence TAVVTNPKE
Primary information
sequence IDSeq_8091
Peptide sequenceTAVVTNPKE
CancerPDF_ID CancerPDF_ID9899, CancerPDF_ID12380, CancerPDF_ID13937,
PMID21533267,26992070,20974924
Protein NameTransthyretin,Transthyretin,Transthyretin
UniprotKB Entry NameTTHY_HUMAN,A6XGL1_HUMAN,TTHY_HUMAN
FluidSerum,Serum,Plasma
M/Z479.76,NA,958.521
Charge2,NA,2
Mass (in Da)NA,958.5226916,NA
fdrNA,NA,NA
Profiling TechniqueLC-MS,LC-MS,LC-MS
Peptide Identification techniqueLC/MS/MS,LC-MS/MS,LC-MS/MS
Quantification TechniqueMultiple Reaction Monitoring,NA,NA
Labelled/Label FreeLabel Free,Label Free,Label Free
FDR1.49,FDR 1 %,NA
CancerPDF_ID CancerPDF_ID9899, CancerPDF_ID12380, CancerPDF_ID13937,
p-ValueNA,NA,NA
SoftwareMASCOT,SEQUEST and Maxquant,MASCOT and SEQUEST
Length9,9,NA
Cancer TypeLung adenocarcinoma,Melanoma,"Multiple myeloma patients, Acute myeloid leukemia"
DatabaseSwissprot Database (57.4),SwissProt Database,Uniprot database
ModificationNA,NA,NA
Number of Patients62 lung adenocarcinoma and 30 healthy control,8 cancer samples and 4 healthy samples,NA
Regulation"Differentially expressed between earlier-stage lung cancer group (stage-I, II, and IIIa) vs normal","Present in 5 cancer samples out of 8 cancer samples. ,Present in 3 healthy samples out of 4 healthy samples.",NA
ValidationMRM-based validation of 19 candidates,na,NA
SensitivityNA,NA,NA
SpecificityNA,NA,NA
AccuracyNA,NA,NA
Peptide AtlasPeptideAtlas
IEDB181253 439049