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Details of CancerPDF entry with Sequence TAFGGRRAVPPNNSNAAEDDLPTVELQGVVPR
Primary information
sequence IDSeq_8038
Peptide sequenceTAFGGRRAVPPNNSNAAEDDLPTVELQGVVPR
CancerPDF_ID CancerPDF_ID2047, CancerPDF_ID9645,
PMID21136997,21533267
Protein NameCoagulation factor XIII A chain,Coagulation factor XIII A chain
UniprotKB Entry NameF13A_HUMAN,F13A_HUMAN
FluidSerum,Serum
M/Z3346.70181,837.66
Charge1,4
Mass (in Da)NA,NA
fdrNA,NA
Profiling TechniqueLC-MS,LC-MS
Peptide Identification techniqueLC-MS-MS/MS,LC/MS/MS
Quantification TechniqueLC-ESI-MS,Multiple Reaction Monitoring
Labelled/Label FreeLabel Free,Label Free
FDR0.001,1.49
CancerPDF_ID CancerPDF_ID2047, CancerPDF_ID9645,
p-Value1.09E-04,NA
SoftwareMASCOT(v. 2.2.01),MASCOT
Length30,30
Cancer TypeColorectal cancer,Lung adenocarcinoma
DatabaseSwissProt Database,Swissprot Database (57.4)
ModificationNA,NA
Number of Patients30 patients and 30 healthy controls,62 lung adenocarcinoma and 30 healthy control
RegulationDifferentially expressed between cancer vs normal,"Differentially expressed between earlier-stage lung cancer group (stage-I, II, and IIIa) vs normal"
ValidationLeave One out Cross validation,MRM-based validation of 19 candidates
Sensitivity0.898,NA
Specificity0.946,NA
Accuracy0.917,NA
Peptide AtlasNA
IEDB