| Primary information |
|---|
| sequence ID | Seq_7460 |
| Peptide sequence | SPGSPGPDGKTGPP |
| CancerPDF_ID | CancerPDF_ID7042, |
| PMID | 24982608 |
| Protein Name | Collagen alpha-1(I) chain |
| UniprotKB Entry Name | CO1A1_HUMAN |
| Fluid | Urine |
| Profiling Technique | Nano-LC-MS |
| Peptide Identification technique | MS/MS |
| Labelled/Label Free | Label Free |
| FDR | 0.01 |
| CancerPDF_ID | CancerPDF_ID7042, |
| p-Value | NA |
| Software | "GPM search engine, MASCOT" |
| Length | 14 |
| Cancer Type | Ovarian cancer |
| Database | IPI 3.71 Human Database |
| Modification | NA |
| Number of Patients | 6 Ovarian cancer patients and 6 normal individuals |
| Regulation | Uniquely present in case of urine of ovarian cancer patients |
| Validation | NA |
| Sensitivity | NA |
| Specificity | NA |
| Accuracy | NA |
| Peptide Atlas | NA |
| IEDB | NA |
| Primary information |
|---|
| sequence ID | Seq_8021 |
| Peptide sequence | SpGSPGPDGKTGPp |
| CancerPDF_ID | CancerPDF_ID3560, |
| PMID | 27026199 |
| Protein Name | Collagen alpha-1(I) chain |
| UniprotKB Entry Name | CO1A1_HUMAN |
| Fluid | Urine |
| fdr | 1281.58 |
| Profiling Technique | "CE-MS, Micro-TOF-MS" |
| Peptide Identification technique | MS-MS |
| Labelled/Label Free | Label Free |
| CancerPDF_ID | CancerPDF_ID3560, |
| p-Value | less than 0.05 |
| Software | Proteome Discoverer 1.2 |
| Length | 14 |
| Cancer Type | Bladder cancer |
| Database | Uniprot Human non-redundant Database |
| Modification | p:Hydroxy-Proline |
| Number of Patients | 425 for training(109 patients with Recurrent UBC cases and 316 negative for recurrence controls) and 211 for validation (55 UBC recurrent cases and 156 recurrent controls) |
| Regulation | Differentially expressed between recurrence of UBC vs recurrence control |
| Validation | Independent Validation |
| Sensitivity | For testing dataset 88% |
| Specificity | For testing dataset 51% |
| Accuracy | NA |
| Peptide Atlas | NA |
| IEDB | NA |
| Primary information |
|---|
| sequence ID | Seq_8022 |
| Peptide sequence | SpGSpGPDGKTGPp |
| CancerPDF_ID | CancerPDF_ID3561, |
| PMID | 27026199 |
| Protein Name | Collagen alpha1(I) chain |
| UniprotKB Entry Name | CO1A1_HUMAN |
| Fluid | Urine |
| fdr | 1297.58 |
| Profiling Technique | "CE-MS, Micro-TOF-MS" |
| Peptide Identification technique | MS-MS |
| Labelled/Label Free | Label Free |
| CancerPDF_ID | CancerPDF_ID3561, |
| p-Value | less than 0.01 |
| Software | Proteome Discoverer 1.2 |
| Length | 14 |
| Cancer Type | Bladder cancer |
| Database | Uniprot Human non-redundant Database |
| Modification | p:Hydroxy-Proline |
| Number of Patients | 425 for training(109 patients with Recurrent UBC cases and 316 negative for recurrence controls) and 211 for validation (55 UBC recurrent cases and 156 recurrent controls) |
| Regulation | Differentially expressed between recurrence of UBC vs recurrence control |
| Validation | Independent Validation |
| Sensitivity | For testing dataset 88% |
| Specificity | For testing dataset 51% |
| Accuracy | NA |
| Peptide Atlas | NA |
| IEDB | NA |