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Details of CancerPDF entry with Sequence SYKMADEAGSEADHEGTH
Primary information
sequence IDSeq_7972
Peptide sequenceSYKMADEAGSEADHEGTH
CancerPDF_ID CancerPDF_ID563, CancerPDF_ID9748, CancerPDF_ID9749,
PMID19795908,21533267,21533267
Protein NameFibrinogen alpha chain,Fibrinogen alpha chain,Fibrinogen alpha chain
UniprotKB Entry NameFIBA_HUMAN,FIBA_HUMAN,FIBA_HUMAN
FluidPlasma,Serum,Serum
M/Z645.59,645.59,650.93
Charge3,3,3
Mass (in Da)NA,NA,NA
fdrNA,NA,NA
Profiling TechniqueLC-MS,LC-MS,LC-MS
Peptide Identification techniqueMALDI-TOF/TOF,LC/MS/MS,LC/MS/MS
Quantification TechniqueLC-MRM (multiple reaction monitoring),Multiple Reaction Monitoring,Multiple Reaction Monitoring
Labelled/Label FreeLabelled,Label Free,Label Free
FDRless than 7%,1.49,1.49
CancerPDF_ID CancerPDF_ID563, CancerPDF_ID9748, CancerPDF_ID9749,
p-ValueNA,NA,NA
SoftwareFlexAnalysis 3.0 and Biotools 3.0 software,MASCOT,MASCOT
Length18,18,18
Cancer TypeDuctal adenocarcinoma of the pancreas (DAP),Lung adenocarcinoma,Lung adenocarcinoma
DatabaseNCBI refseq Protein Database,Swissprot Database (57.4),Swissprot Database (57.4)
ModificationNA,NA,Oxidation
Number of Patients"42 normal, 28patients",62 lung adenocarcinoma and 30 healthy control,62 lung adenocarcinoma and 30 healthy control
RegulationNA,"Differentially expressed between earlier-stage lung cancer group (stage-I, II, and IIIa) vs normal","Differentially expressed between earlier-stage lung cancer group (stage-I, II, and IIIa) vs normal"
ValidationNA,MRM-based validation of 19 candidates,MRM-based validation of 19 candidates
SensitivityNA,NA,NA
SpecificityNA,NA,NA
AccuracyNA,NA,NA
Peptide AtlasNA
IEDB