Primary information |
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sequence ID | Seq_7714 |
Peptide sequence | SSSYSKQFTSSTSYNRGDSTFESK |
CancerPDF_ID | CancerPDF_ID520, CancerPDF_ID1282, CancerPDF_ID2404, CancerPDF_ID9493, |
PMID | 19795908,21136997,21136997,26379225 |
Protein Name | Fibrinogen alpha chain,Fibrinogen alpha,Fibrinogen alpha,Fibrinogen alpha chain |
UniprotKB Entry Name | FIBA_HUMAN,FIBA_HUMAN,FIBA_HUMAN,FIBA_HUMAN |
Fluid | Plasma,Serum,Plasma,Plasma |
M/Z | 894.4,2680.18888,2680.1889,2681.21 |
Charge | 3,1,1,NA |
Mass (in Da) | NA,NA,NA,NA |
fdr | NA,NA,NA,NA |
Profiling Technique | LC-MS,LC-MS,LC-MS,MALDI-TOF |
Peptide Identification technique | MALDI-TOF/TOF,LC-MS-MS/MS,LC-MS-MS/MS,MALDI-TOF/TOF |
Quantification Technique | LC-MRM (multiple reaction monitoring),LC-ESI-MS,LC-ESI-MS,NA |
Labelled/Label Free | Labelled,Label Free,Label Free,Label Free |
FDR | less than 7%,NA,NA,NA |
CancerPDF_ID | CancerPDF_ID520, CancerPDF_ID1282, CancerPDF_ID2404, CancerPDF_ID9493, |
p-Value | NA,NA,NA,NA |
Software | FlexAnalysis 3.0 and Biotools 3.0 software,MASCOT(v. 2.2.01),MASCOT(v. 2.2.01),MASCOT (v 2.3) |
Length | 24,24,24,24 |
Cancer Type | Ductal adenocarcinoma of the pancreas (DAP),Colorectal cancer,Normal,Colorectal cancer |
Database | NCBI refseq Protein Database,SwissProt Database,SwissProt Database,UniprotKB |
Modification | NA,NA,NA,NA |
Number of Patients | "42 normal, 28patients",30 patients and 30 healthy controls,27 healthy individuals,"94 patients with CRC, 23 with liver metastasis from CRC (histologically defined) and 34 subjects, which underwent colonoscopy and resulted negative" |
Regulation | NA,NA,NA,"Similar median ion intensity between controls and liver metastasis, and higher median ion intensity for adenoma and CRC groups." |
Validation | NA,Leave One out Cross validation,Leave One out Cross validation,NA |
Sensitivity | NA,NA,NA,NA |
Specificity | NA,NA,NA,NA |
Accuracy | NA,NA,NA,NA |
Peptide Atlas | PeptideAtlas |
IEDB | |