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Details of CancerPDF entry with Sequence SHALQLNNRQI
Primary information
sequence IDSeq_7182
Peptide sequenceSHALQLNNRQI
CancerPDF_ID CancerPDF_ID883, CancerPDF_ID12190,
PMID19795908,26992070
Protein NameComplement C4-B,Complement C4-B
UniprotKB Entry NameCO4B_HUMAN,CO4B_HUMAN
FluidPlasma,Serum
M/Z647.35,1292.6949
Charge2,NA
Mass (in Da)NA,1293.704637
fdrNA,NA
Profiling TechniqueLC-MS,LC-MS
Peptide Identification techniqueMALDI-TOF/TOF,LC-MS/MS
Quantification TechniqueLC-MRM (multiple reaction monitoring),NA
Labelled/Label FreeLabelled,Label Free
FDRless than 7%,FDR 1 %
CancerPDF_ID CancerPDF_ID883, CancerPDF_ID12190,
p-ValueNA,NA
SoftwareFlexAnalysis 3.0 and Biotools 3.0 software,SEQUEST and Maxquant
Length11,11
Cancer TypeDuctal adenocarcinoma of the pancreas (DAP),Melanoma
DatabaseNCBI refseq Protein Database,SwissProt Database
ModificationNA,NA
Number of Patients"42 normal, 28 patients",8 cancer samples and 4 healthy samples
RegulationNA,"Present in 3 cancer samples out of 8 cancer samples. ,Present in 0 healthy samples out of 4 healthy samples."
ValidationNA,na
SensitivityNA,NA
SpecificityNA,NA
AccuracyNA,NA
Peptide AtlasNA
IEDB