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Details of CancerPDF entry with Sequence SGGGGGGGLGSGGSIR
Primary information
sequence IDSeq_7105
Peptide sequenceSGGGGGGGLGSGGSIR
CancerPDF_ID CancerPDF_ID9230, CancerPDF_ID12184,
PMID24694173,26992070
Protein Name"Keratin, type I cytoskeletal 9","Keratin, type I cytoskeletal 9"
UniprotKB Entry NameK1C9_HUMAN,K1C9_HUMAN
FluidAscites fluid,Serum
M/ZNA,1231.5905
Charge1,NA
Mass (in Da)NA,1232.598436
fdrNA,NA
Profiling TechniqueLTQ-Orbitrap XL,LC-MS
Peptide Identification techniqueX tandem for peptide identification,LC-MS/MS
Quantification TechniqueNA,NA
Labelled/Label FreeLabel Free,Label Free
FDRNA,FDR 1 %
CancerPDF_ID CancerPDF_ID9230, CancerPDF_ID12184,
p-ValueNA,NA
Software"X tandem for peptide identification,Scaffold 2 software for any modification analysis",SEQUEST and Maxquant
Length16,16
Cancer TypeOvarian cancer,Melanoma
DatabaseIPI00019359,SwissProt Database
ModificationNA,NA
Number of Patients3 ovarian cancer patient and 3 non cancerous control,8 cancer samples and 4 healthy samples
RegulationUniquely expressed in ovarian cancer patient,"Present in 8 cancer samples out of 8 cancer samples. ,Present in 4 healthy samples out of 4 healthy samples."
ValidationNA,na
SensitivityNA,NA
SpecificityNA,NA
AccuracyNA,NA
Peptide AtlasPeptideAtlas
IEDB240331 240393 240394 240524 240525 240526