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Details of CancerPDF entry with Sequence RVEPYGENFN
Primary information
sequence IDSeq_6765
Peptide sequenceRVEPYGENFN
CancerPDF_ID CancerPDF_ID377, CancerPDF_ID1415, CancerPDF_ID2574,
PMID19795908,21136997,21136997
Protein NameApolipoprotein A-IV,Apolipoprotein A-IV,Apolipoprotein A-IV
UniprotKB Entry NameAPOA4_HUMAN,APOA4_HUMAN,APOA4_HUMAN
FluidPlasma,Serum,Plasma
M/Z611.78,1223.5571,1223.5571
Charge2,1,1
Mass (in Da)NA,NA,NA
fdrNA,NA,NA
Profiling TechniqueLC-MS,LC-MS,LC-MS
Peptide Identification techniqueMALDI-TOF/TOF,LC-MS-MS/MS,LC-MS-MS/MS
Quantification TechniqueLC-MRM (multiple reaction monitoring),LC-ESI-MS,LC-ESI-MS
Labelled/Label FreeLabelled,Label Free,Label Free
FDRless than 7%,NA,NA
CancerPDF_ID CancerPDF_ID377, CancerPDF_ID1415, CancerPDF_ID2574,
p-ValueNA,NA,NA
SoftwareFlexAnalysis 3.0 and Biotools 3.0 software,MASCOT(v. 2.2.01),MASCOT(v. 2.2.01)
Length10,10,10
Cancer TypeDuctal adenocarcinoma of the pancreas (DAP),Colorectal cancer,Normal
DatabaseNCBI refseq Protein Database,SwissProt Database,SwissProt Database
ModificationNA,NA,NA
Number of Patients"40 normal, 28 patients",30 patients and 30 healthy controls,27 healthy individuals
RegulationNA,NA,NA
ValidationNA,Leave One out Cross validation,Leave One out Cross validation
SensitivityNA,NA,NA
SpecificityNA,NA,NA
AccuracyNA,NA,NA
Peptide AtlasPeptideAtlas
IEDB