Primary information |
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sequence ID | Seq_6053 |
Peptide sequence | PSGPpGPAGSPGERGAAGSGGPIGpPG |
CancerPDF_ID | CancerPDF_ID3732, |
PMID | 27026199 |
Protein Name | Collagen alpha-2(XI) chain |
UniprotKB Entry Name | COBA2_HUMAN |
Fluid | Urine |
fdr | 2269 |
Profiling Technique | "CE-MS, Micro-TOF-MS" |
Peptide Identification technique | MS-MS |
Labelled/Label Free | Label Free |
CancerPDF_ID | CancerPDF_ID3732, |
p-Value | less than 0.05 |
Software | Proteome Discoverer 1.2 |
Length | 27 |
Cancer Type | Bladder cancer |
Database | Uniprot Human non-redundant Database |
Modification | p:Hydroxy-Proline |
Number of Patients | 425 for training(109 patients with Recurrent UBC cases and 316 negative for recurrence controls) and 211 for validation (55 UBC recurrent cases and 156 recurrent controls) |
Regulation | Differentially expressed between recurrence of UBC vs recurrence control |
Validation | Independent Validation |
Sensitivity | For testing dataset 88% |
Specificity | For testing dataset 51% |
Accuracy | NA |
Peptide Atlas | NA |
IEDB | NA |