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Details of CancerPDF entry with Sequence PPYPPQEQRSRPYLHGTRH
Primary information
sequence IDSeq_6030
Peptide sequencePPYPPQEQRSRPYLHGTRH
CancerPDF_ID CancerPDF_ID3733,
PMID27026199
Protein NameLIM domain-containing protein 1
UniprotKB Entry NameLIMD1_HUMAN
FluidUrine
fdr2315.1
Profiling Technique"CE-MS, Micro-TOF-MS"
Peptide Identification techniqueMS-MS
Labelled/Label FreeLabel Free
CancerPDF_ID CancerPDF_ID3733,
p-Valueless than 0.05
SoftwareProteome Discoverer 1.2
Length19
Cancer TypeBladder cancer
DatabaseUniprot Human non-redundant Database
ModificationNA
Number of Patients 425 for training(109 patients with Recurrent UBC cases and 316 negative for recurrence controls) and 211 for validation (55 UBC recurrent cases and 156 recurrent controls)
RegulationDifferentially expressed between recurrence of UBC vs recurrence control
ValidationIndependent Validation
SensitivityFor testing dataset 88%
SpecificityFor testing dataset 51%
AccuracyNA
Peptide AtlasNA
IEDBNA